RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 GBP4Q96PP9 640 aa18.83■□□□□ 0.61
CTNS-202ENST00000381870 FAM13BQ9NYF5 915 aa18.83■□□□□ 0.61
CTNS-202ENST00000381870 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.61
CTNS-202ENST00000381870 SYNMO15061 1565 aa18.82■□□□□ 0.6
CTNS-202ENST00000381870 RAB3GAP1Q15042 981 aa18.82■□□□□ 0.6
CTNS-202ENST00000381870 SKOR2Q2VWA4 1001 aaPredicted RBP18.81■□□□□ 0.6
CTNS-202ENST00000381870 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.81■□□□□ 0.6
CTNS-202ENST00000381870 SMC5Q8IY18 1101 aa18.81■□□□□ 0.6
CTNS-202ENST00000381870 NGEFQ8N5V2 710 aa18.81■□□□□ 0.6
CTNS-202ENST00000381870 FOXD4L1Q9NU39 408 aa18.81■□□□□ 0.6
CTNS-202ENST00000381870 MSNP26038 577 aaKnown RBP18.8■□□□□ 0.6
CTNS-202ENST00000381870 R3HCC1Q9Y3T6 440 aaKnown RBP18.8■□□□□ 0.6
CTNS-202ENST00000381870 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
CTNS-202ENST00000381870 RNF17Q9BXT8 1623 aaKnown RBP18.8■□□□□ 0.6
CTNS-202ENST00000381870 NPC1L1Q9UHC9 1359 aa18.79■□□□□ 0.6
CTNS-202ENST00000381870 MVPQ14764 893 aaKnown RBP18.78■□□□□ 0.6
CTNS-202ENST00000381870 SNX21Q969T3 373 aa18.78■□□□□ 0.6
CTNS-202ENST00000381870 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
CTNS-202ENST00000381870 CIZ1Q9ULV3 898 aaPredicted RBP18.78■□□□□ 0.6
CTNS-202ENST00000381870 ARID3AQ99856 593 aa18.77■□□□□ 0.59
CTNS-202ENST00000381870 RBM25P49756 843 aaKnown RBP18.76■□□□□ 0.59
CTNS-202ENST00000381870 TERF1P54274 439 aa18.76■□□□□ 0.59
CTNS-202ENST00000381870 MYOM1P52179 1685 aa18.76■□□□□ 0.59
CTNS-202ENST00000381870 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
CTNS-202ENST00000381870 ANP32BQ92688 251 aaKnown RBP18.76■□□□□ 0.59
CTNS-202ENST00000381870 CD2BP2O95400 341 aaKnown RBP18.75■□□□□ 0.59
CTNS-202ENST00000381870 SSFA2P28290 1259 aa18.74■□□□□ 0.59
CTNS-202ENST00000381870 A0A0U1RQG5 324 aaPredicted RBP18.74■□□□□ 0.59
CTNS-202ENST00000381870 PTMSP20962 102 aa18.73■□□□□ 0.59
CTNS-202ENST00000381870 MAP7D2Q96T17 732 aa18.73■□□□□ 0.59
CTNS-202ENST00000381870 IQGAP1P46940 1657 aa18.73■□□□□ 0.59
CTNS-202ENST00000381870 FTSJ3Q8IY81 847 aaKnown RBP18.73■□□□□ 0.59
CTNS-202ENST00000381870 TCP11L2Q8N4U5 519 aa18.73■□□□□ 0.59
CTNS-202ENST00000381870 CARD14Q9BXL6 1004 aa18.73■□□□□ 0.59
CTNS-202ENST00000381870 UQCRHLA0A096LP55 91 aa18.72■□□□□ 0.59
CTNS-202ENST00000381870 UQCRHP07919 91 aa18.72■□□□□ 0.59
CTNS-202ENST00000381870 XPCQ01831 940 aaPredicted RBP18.72■□□□□ 0.59
CTNS-202ENST00000381870 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
CTNS-202ENST00000381870 SCAPERQ9BY12 1400 aa18.72■□□□□ 0.59
CTNS-202ENST00000381870 DDX49Q9Y6V7 483 aaKnown RBP18.72■□□□□ 0.59
CTNS-202ENST00000381870 ARHGEF5Q12774 1597 aa18.71■□□□□ 0.59
CTNS-202ENST00000381870 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.71■□□□□ 0.59
CTNS-202ENST00000381870 DZIP1LQ8IYY4 767 aaKnown RBP18.71■□□□□ 0.58
CTNS-202ENST00000381870 KIF2CQ99661 725 aa18.71■□□□□ 0.58
CTNS-202ENST00000381870 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
CTNS-202ENST00000381870 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
CTNS-202ENST00000381870 HDAC1Q13547 482 aaPredicted RBP18.69■□□□□ 0.58
CTNS-202ENST00000381870 KLHL40Q2TBA0 621 aa18.69■□□□□ 0.58
CTNS-202ENST00000381870 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
CTNS-202ENST00000381870 SCAF11Q99590 1463 aaKnown RBP18.68■□□□□ 0.58
CTNS-202ENST00000381870 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
CTNS-202ENST00000381870 NOL7Q9UMY1 257 aaKnown RBP18.68■□□□□ 0.58
CTNS-202ENST00000381870 POLR3AO14802 1390 aaPredicted RBP18.68■□□□□ 0.58
CTNS-202ENST00000381870 WDR63Q8IWG1 891 aa18.68■□□□□ 0.58
CTNS-202ENST00000381870 RBM42Q9BTD8 480 aaKnown RBP18.68■□□□□ 0.58
CTNS-202ENST00000381870 PRDM10Q9NQV6 1147 aa18.68■□□□□ 0.58
CTNS-202ENST00000381870 UNC13BO14795 1591 aa18.68■□□□□ 0.58
CTNS-202ENST00000381870 ZNF500O60304 480 aaPredicted RBP18.67■□□□□ 0.58
CTNS-202ENST00000381870 TNNT2P45379 298 aaPredicted RBP18.67■□□□□ 0.58
CTNS-202ENST00000381870 IBTKQ9P2D0 1353 aaPredicted RBP18.67■□□□□ 0.58
CTNS-202ENST00000381870 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
CTNS-202ENST00000381870 GOLGA6L22H0YM25 854 aa18.67■□□□□ 0.58
CTNS-202ENST00000381870 SMAP1Q8IYB5 467 aaPredicted RBP18.67■□□□□ 0.58
CTNS-202ENST00000381870 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
CTNS-202ENST00000381870 BAG4O95429 457 aaKnown RBP18.66■□□□□ 0.58
CTNS-202ENST00000381870 K7ELQ4 463 aaPredicted RBP18.66■□□□□ 0.58
CTNS-202ENST00000381870 ITPRIPQ8IWB1 547 aa18.66■□□□□ 0.58
CTNS-202ENST00000381870 IQSEC2Q5JU85 1478 aa18.66■□□□□ 0.58
CTNS-202ENST00000381870 HS1BP3Q53T59 392 aa18.65■□□□□ 0.58
CTNS-202ENST00000381870 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
CTNS-202ENST00000381870 ZHX1Q9UKY1 873 aaPredicted RBP18.65■□□□□ 0.58
CTNS-202ENST00000381870 NCLP19338 710 aaKnown RBP18.64■□□□□ 0.58
CTNS-202ENST00000381870 CAVIN1Q6NZI2 390 aaKnown RBP18.64■□□□□ 0.58
CTNS-202ENST00000381870 LNPKQ9C0E8 428 aa18.64■□□□□ 0.58
CTNS-202ENST00000381870 TRIM27P14373 513 aa18.64■□□□□ 0.57
CTNS-202ENST00000381870 ZNF445P59923 1031 aa18.64■□□□□ 0.57
CTNS-202ENST00000381870 SAMD9LQ8IVG5 1584 aa18.64■□□□□ 0.57
CTNS-202ENST00000381870 ATP10AO60312 1499 aa18.63■□□□□ 0.57
CTNS-202ENST00000381870 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
CTNS-202ENST00000381870 ZSCAN23Q3MJ62 389 aa18.63■□□□□ 0.57
CTNS-202ENST00000381870 CLEC17AQ6ZS10 378 aa18.63■□□□□ 0.57
CTNS-202ENST00000381870 PDLIM2Q96JY6 352 aa18.63■□□□□ 0.57
CTNS-202ENST00000381870 KDM5AP29375 1690 aaKnown RBP18.63■□□□□ 0.57
CTNS-202ENST00000381870 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
CTNS-202ENST00000381870 CEP152O94986 1710 aa18.62■□□□□ 0.57
CTNS-202ENST00000381870 ATP10BO94823 1461 aa18.62■□□□□ 0.57
CTNS-202ENST00000381870 DYNC1I1O14576 645 aa18.62■□□□□ 0.57
CTNS-202ENST00000381870 MCTP1Q6DN14 999 aa18.62■□□□□ 0.57
CTNS-202ENST00000381870 TSR2Q969E8 191 aaKnown RBP18.62■□□□□ 0.57
CTNS-202ENST00000381870 SMC4Q9NTJ3 1288 aa18.62■□□□□ 0.57
CTNS-202ENST00000381870 NUCB1Q02818 461 aa18.61■□□□□ 0.57
CTNS-202ENST00000381870 DDX19BQ9UMR2 479 aa18.61■□□□□ 0.57
CTNS-202ENST00000381870 ZKSCAN5Q9Y2L8 839 aa18.61■□□□□ 0.57
CTNS-202ENST00000381870 PRIM1P49642 420 aaKnown RBP18.6■□□□□ 0.57
CTNS-202ENST00000381870 ABCA8O94911 1581 aa18.6■□□□□ 0.57
CTNS-202ENST00000381870 KANK1Q14678 1352 aa18.6■□□□□ 0.57
CTNS-202ENST00000381870 MTERF4Q7Z6M4 381 aaKnown RBP18.59■□□□□ 0.57
CTNS-202ENST00000381870 AK9Q5TCS8 1911 aa18.59■□□□□ 0.57
CTNS-202ENST00000381870 CCDC27Q2M243 656 aa18.58■□□□□ 0.57
CTNS-202ENST00000381870 MORC1Q86VD1 984 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms