RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 DENND4BO75064 1496 aaPredicted RBP15.22■□□□□ 0.03
SHOX-203ENST00000381578 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
SHOX-203ENST00000381578 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
SHOX-203ENST00000381578 SPATA31E1Q6ZUB1 1445 aa15.21■□□□□ 0.02
SHOX-203ENST00000381578 FAM69CQ0P6D2 419 aa15.2■□□□□ 0.02
SHOX-203ENST00000381578 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
SHOX-203ENST00000381578 RNF214Q8ND24 703 aa15.2■□□□□ 0.02
SHOX-203ENST00000381578 NOL8Q76FK4 1167 aaKnown RBP15.19■□□□□ 0.02
SHOX-203ENST00000381578 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
SHOX-203ENST00000381578 RAPGEF3O95398 923 aa15.19■□□□□ 0.02
SHOX-203ENST00000381578 MCTP1Q6DN14 999 aa15.19■□□□□ 0.02
SHOX-203ENST00000381578 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
SHOX-203ENST00000381578 TBC1D32Q96NH3 1257 aa15.19■□□□□ 0.02
SHOX-203ENST00000381578 CAVIN1Q6NZI2 390 aaKnown RBP15.18■□□□□ 0.02
SHOX-203ENST00000381578 TPM2P07951 284 aa15.18■□□□□ 0.02
SHOX-203ENST00000381578 PCDHB15Q9Y5E8 787 aa15.18■□□□□ 0.02
SHOX-203ENST00000381578 SAFB2Q14151 953 aaKnown RBP eCLIP15.17■□□□□ 0.02
SHOX-203ENST00000381578 ANKRD45Q5TZF3 282 aa15.17■□□□□ 0.02
SHOX-203ENST00000381578 ARHGEF12Q9NZN5 1544 aa15.17■□□□□ 0.02
SHOX-203ENST00000381578 CROCC2H7BZ55 1655 aa15.17■□□□□ 0.02
SHOX-203ENST00000381578 XPCQ01831 940 aaPredicted RBP15.16■□□□□ 0.02
SHOX-203ENST00000381578 PDE3AQ14432 1141 aa15.16■□□□□ 0.02
SHOX-203ENST00000381578 DUOX2Q9NRD8 1548 aa15.16■□□□□ 0.02
SHOX-203ENST00000381578 ZHX1Q9UKY1 873 aaPredicted RBP15.16■□□□□ 0.02
SHOX-203ENST00000381578 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
SHOX-203ENST00000381578 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
SHOX-203ENST00000381578 FAM135AQ9P2D6 1515 aa15.15■□□□□ 0.02
SHOX-203ENST00000381578 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
SHOX-203ENST00000381578 PER1O15534 1290 aaPredicted RBP15.15■□□□□ 0.02
SHOX-203ENST00000381578 TNPO1Q92973 898 aaKnown RBP15.15■□□□□ 0.02
SHOX-203ENST00000381578 ZKSCAN2Q63HK3 967 aa15.15■□□□□ 0.02
SHOX-203ENST00000381578 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.15■□□□□ 0.02
SHOX-203ENST00000381578 DZIP1LQ8IYY4 767 aaKnown RBP15.15■□□□□ 0.02
SHOX-203ENST00000381578 TSR2Q969E8 191 aaKnown RBP15.14■□□□□ 0.01
SHOX-203ENST00000381578 DISP3Q9P2K9 1392 aa15.14■□□□□ 0.01
SHOX-203ENST00000381578 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
SHOX-203ENST00000381578 BCL11BQ9C0K0 894 aaPredicted RBP15.13■□□□□ 0.01
SHOX-203ENST00000381578 SKOR2Q2VWA4 1001 aaPredicted RBP15.13■□□□□ 0.01
SHOX-203ENST00000381578 PDCL3Q9H2J4 239 aa15.13■□□□□ 0.01
SHOX-203ENST00000381578 PARD3Q8TEW0 1356 aa15.12■□□□□ 0.01
SHOX-203ENST00000381578 TEX14Q8IWB6 1497 aa15.12■□□□□ 0.01
SHOX-203ENST00000381578 UQCRHLA0A096LP55 91 aa15.12■□□□□ 0.01
SHOX-203ENST00000381578 UQCRHP07919 91 aa15.12■□□□□ 0.01
SHOX-203ENST00000381578 ERBINQ96RT1 1412 aa15.12■□□□□ 0.01
SHOX-203ENST00000381578 RLBP1P12271 317 aa15.12■□□□□ 0.01
SHOX-203ENST00000381578 ABCC1P33527 1531 aa15.11■□□□□ 0.01
SHOX-203ENST00000381578 ZSCAN30Q86W11 494 aa15.1■□□□□ 0.01
SHOX-203ENST00000381578 SSFA2P28290 1259 aa15.1■□□□□ 0.01
SHOX-203ENST00000381578 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
SHOX-203ENST00000381578 C1orf115Q9H7X2 142 aa15.1■□□□□ 0.01
SHOX-203ENST00000381578 CCDC173Q0VFZ6 552 aa15.09■□□□□ 0.01
SHOX-203ENST00000381578 RTEL1-TNFRSF6BF6WH68 1400 aa15.09■□□□□ 0.01
SHOX-203ENST00000381578 ERBB4Q15303 1308 aa15.09■□□□□ 0.01
SHOX-203ENST00000381578 ESF1Q9H501 851 aaKnown RBP15.08■□□□□ 0.01
SHOX-203ENST00000381578 USP19O94966 1318 aa15.08■□□□□ 0.01
SHOX-203ENST00000381578 EIF3AQ14152 1382 aaKnown RBP15.08■□□□□ 0.01
SHOX-203ENST00000381578 PRPF40AO75400 957 aaKnown RBP15.08■□□□□ 0
SHOX-203ENST00000381578 MLECQ14165 292 aa15.08■□□□□ 0
SHOX-203ENST00000381578 GAS2L3Q86XJ1 694 aa15.08■□□□□ 0
SHOX-203ENST00000381578 RARSP54136 660 aaKnown RBP15.08■□□□□ 0
SHOX-203ENST00000381578 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
SHOX-203ENST00000381578 ANTXR1Q9H6X2 564 aa15.06■□□□□ 0
SHOX-203ENST00000381578 TRAK1Q9UPV9 953 aa15.06■□□□□ 0
SHOX-203ENST00000381578 KIAA2012Q0VF49 1180 aa15.05■□□□□ 0
SHOX-203ENST00000381578 ATP7AQ04656 1500 aa15.05■□□□□ -0
SHOX-203ENST00000381578 ZNF518AQ6AHZ1 1483 aa15.05■□□□□ -0
SHOX-203ENST00000381578 EXOSC9Q06265 439 aaKnown RBP15.05■□□□□ -0
SHOX-203ENST00000381578 PTMSP20962 102 aa15.04■□□□□ -0
SHOX-203ENST00000381578 MAST1Q9Y2H9 1570 aa15.04■□□□□ -0
SHOX-203ENST00000381578 NKTRP30414 1462 aaKnown RBP15.04■□□□□ -0
SHOX-203ENST00000381578 MVPQ14764 893 aaKnown RBP15.04■□□□□ -0
SHOX-203ENST00000381578 RUNDC1Q96C34 613 aa15.04■□□□□ -0
SHOX-203ENST00000381578 MTHFSP49914 203 aa15.03■□□□□ -0
SHOX-203ENST00000381578 NUTM2DQ5VT03 806 aaPredicted RBP15.03■□□□□ -0
SHOX-203ENST00000381578 FSD2A1L4K1 749 aa15.03■□□□□ -0
SHOX-203ENST00000381578 DDX19BQ9UMR2 479 aa15.03■□□□□ -0
SHOX-203ENST00000381578 ARAP3Q8WWN8 1544 aa15.03■□□□□ -0
SHOX-203ENST00000381578 IPO8O15397 1037 aaKnown RBP15.02■□□□□ -0
SHOX-203ENST00000381578 TESK2Q96S53 571 aa15.02□□□□□ -0.01
SHOX-203ENST00000381578 RBM27Q9P2N5 1060 aaKnown RBP15.02□□□□□ -0.01
SHOX-203ENST00000381578 KDM5DQ9BY66 1539 aa15.02□□□□□ -0.01
SHOX-203ENST00000381578 PLXNC1O60486 1568 aa15.01□□□□□ -0.01
SHOX-203ENST00000381578 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
SHOX-203ENST00000381578 ABCA9Q8IUA7 1624 aa15.01□□□□□ -0.01
SHOX-203ENST00000381578 CDK11BP21127 795 aaKnown RBP15.01□□□□□ -0.01
SHOX-203ENST00000381578 NOB1Q9ULX3 412 aaKnown RBP15.01□□□□□ -0.01
SHOX-203ENST00000381578 CBX1P83916 185 aa15.01□□□□□ -0.01
SHOX-203ENST00000381578 CASC1Q6TDU7 716 aa15.01□□□□□ -0.01
SHOX-203ENST00000381578 A2MP01023 1474 aa15□□□□□ -0.01
SHOX-203ENST00000381578 K7ELQ4 463 aaPredicted RBP15□□□□□ -0.01
SHOX-203ENST00000381578 FAM177BA6PVY3 158 aa15□□□□□ -0.01
SHOX-203ENST00000381578 ISY1Q9ULR0 285 aaKnown RBP14.99□□□□□ -0.01
SHOX-203ENST00000381578 SYCE3A1L190 88 aa14.99□□□□□ -0.01
SHOX-203ENST00000381578 CFAP70Q5T0N1 1121 aa14.99□□□□□ -0.01
SHOX-203ENST00000381578 ZFYVE16Q7Z3T8 1539 aa14.99□□□□□ -0.01
SHOX-203ENST00000381578 CHAF1AQ13111 956 aaPredicted RBP14.98□□□□□ -0.01
SHOX-203ENST00000381578 TMEM57Q8N5G2 664 aa14.98□□□□□ -0.01
SHOX-203ENST00000381578 SLC12A5Q9H2X9 1139 aa14.98□□□□□ -0.01
SHOX-203ENST00000381578 IGSF3O75054 1194 aa14.98□□□□□ -0.01
SHOX-203ENST00000381578 MAP7D2Q96T17 732 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms