RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 EIF3AQ14152 1382 aaKnown RBP21.85■■□□□ 1.09
PDGFB-202ENST00000381551 IQSEC2Q5JU85 1478 aa21.83■■□□□ 1.09
PDGFB-202ENST00000381551 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.83■■□□□ 1.09
PDGFB-202ENST00000381551 ADGRL3Q9HAR2 1447 aa21.83■■□□□ 1.09
PDGFB-202ENST00000381551 ST20-MTHFSA0A0A6YYL1 179 aa21.83■■□□□ 1.09
PDGFB-202ENST00000381551 MSH6P52701 1360 aa21.83■■□□□ 1.08
PDGFB-202ENST00000381551 USP47Q96K76 1375 aa21.83■■□□□ 1.08
PDGFB-202ENST00000381551 MINK1Q8N4C8 1332 aaPredicted RBP21.82■■□□□ 1.08
PDGFB-202ENST00000381551 HIRIP3Q9BW71 556 aaPredicted RBP21.81■■□□□ 1.08
PDGFB-202ENST00000381551 ATF3P18847 181 aa21.8■■□□□ 1.08
PDGFB-202ENST00000381551 EIF4G2P78344 907 aaKnown RBP eCLIP21.8■■□□□ 1.08
PDGFB-202ENST00000381551 CADPS2Q86UW7 1296 aa21.79■■□□□ 1.08
PDGFB-202ENST00000381551 NALCNQ8IZF0 1738 aa21.78■■□□□ 1.08
PDGFB-202ENST00000381551 TESK2Q96S53 571 aa21.78■■□□□ 1.08
PDGFB-202ENST00000381551 WASLO00401 505 aaPredicted RBP21.77■■□□□ 1.08
PDGFB-202ENST00000381551 HSPA5P11021 654 aaKnown RBP21.77■■□□□ 1.08
PDGFB-202ENST00000381551 SOCS7O14512 581 aa21.76■■□□□ 1.07
PDGFB-202ENST00000381551 DCCP43146 1447 aa21.76■■□□□ 1.07
PDGFB-202ENST00000381551 SBNO2Q9Y2G9 1366 aa21.75■■□□□ 1.07
PDGFB-202ENST00000381551 TOM1O60784 492 aa21.75■■□□□ 1.07
PDGFB-202ENST00000381551 CDK19Q9BWU1 502 aa21.75■■□□□ 1.07
PDGFB-202ENST00000381551 SLAIN2Q9P270 581 aa21.75■■□□□ 1.07
PDGFB-202ENST00000381551 SLC24A1O60721 1099 aa21.74■■□□□ 1.07
PDGFB-202ENST00000381551 QRICH2Q9H0J4 1663 aa21.74■■□□□ 1.07
PDGFB-202ENST00000381551 UBAP1LF5GYI3 381 aa21.73■■□□□ 1.07
PDGFB-202ENST00000381551 DISP3Q9P2K9 1392 aa21.73■■□□□ 1.07
PDGFB-202ENST00000381551 ADGRB2O60241 1585 aa21.72■■□□□ 1.07
PDGFB-202ENST00000381551 CDC42BPGQ6DT37 1551 aa21.72■■□□□ 1.07
PDGFB-202ENST00000381551 NUTM2FA1L443 756 aa21.71■■□□□ 1.07
PDGFB-202ENST00000381551 EVC2Q86UK5 1308 aa21.71■■□□□ 1.07
PDGFB-202ENST00000381551 MST1RQ04912 1400 aa21.7■■□□□ 1.06
PDGFB-202ENST00000381551 ILDR2Q71H61 639 aa21.69■■□□□ 1.06
PDGFB-202ENST00000381551 CABP2Q9NPB3 220 aa21.68■■□□□ 1.06
PDGFB-202ENST00000381551 TULP4Q9NRJ4 1543 aa21.67■■□□□ 1.06
PDGFB-202ENST00000381551 C1orf167Q5SNV9 1468 aa21.67■■□□□ 1.06
PDGFB-202ENST00000381551 SRPK2P78362 688 aaKnown RBP21.67■■□□□ 1.06
PDGFB-202ENST00000381551 TMF1P82094 1093 aa21.67■■□□□ 1.06
PDGFB-202ENST00000381551 NUDT16Q96DE0 195 aaKnown RBP21.67■■□□□ 1.06
PDGFB-202ENST00000381551 FMN2Q9NZ56 1722 aa21.66■■□□□ 1.06
PDGFB-202ENST00000381551 PRR36Q9H6K5 1346 aa21.66■■□□□ 1.06
PDGFB-202ENST00000381551 PIP4K2BP78356 416 aa21.65■■□□□ 1.06
PDGFB-202ENST00000381551 PUS7Q96PZ0 661 aaKnown RBP21.65■■□□□ 1.06
PDGFB-202ENST00000381551 ORAI2Q96SN7 254 aa21.65■■□□□ 1.06
PDGFB-202ENST00000381551 ESCO1Q5FWF5 840 aa21.64■■□□□ 1.05
PDGFB-202ENST00000381551 ANKARQ7Z5J8 1434 aa21.63■■□□□ 1.05
PDGFB-202ENST00000381551 CCDC61Q9Y6R9 512 aa21.63■■□□□ 1.05
PDGFB-202ENST00000381551 BRINP3Q76B58 766 aa21.62■■□□□ 1.05
PDGFB-202ENST00000381551 C11orf95C9JLR9 678 aaPredicted RBP21.61■■□□□ 1.05
PDGFB-202ENST00000381551 USP32Q8NFA0 1604 aa21.61■■□□□ 1.05
PDGFB-202ENST00000381551 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
PDGFB-202ENST00000381551 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
PDGFB-202ENST00000381551 ATP7BP35670 1465 aa21.59■■□□□ 1.05
PDGFB-202ENST00000381551 RGPD8O14715 1765 aaPredicted RBP21.59■■□□□ 1.05
PDGFB-202ENST00000381551 PHF8Q9UPP1 1060 aa21.59■■□□□ 1.05
PDGFB-202ENST00000381551 PLEKHG3A1L390 1219 aa21.58■■□□□ 1.05
PDGFB-202ENST00000381551 CABP1Q9NZU7 370 aa21.58■■□□□ 1.05
PDGFB-202ENST00000381551 PMFBP1Q8TBY8 1022 aa21.57■■□□□ 1.04
PDGFB-202ENST00000381551 ATAD2Q6PL18 1390 aa21.57■■□□□ 1.04
PDGFB-202ENST00000381551 ROBO1Q9Y6N7 1651 aa21.54■■□□□ 1.04
PDGFB-202ENST00000381551 FOXO3O43524 673 aa21.54■■□□□ 1.04
PDGFB-202ENST00000381551 PPIP5K1Q6PFW1 1433 aa21.54■■□□□ 1.04
PDGFB-202ENST00000381551 DDX17Q92841 729 aaKnown RBP21.53■■□□□ 1.04
PDGFB-202ENST00000381551 SLC12A5Q9H2X9 1139 aa21.53■■□□□ 1.04
PDGFB-202ENST00000381551 TMC1Q8TDI8 760 aa21.52■■□□□ 1.04
PDGFB-202ENST00000381551 NGDNQ8NEJ9 315 aaKnown RBP21.51■■□□□ 1.03
PDGFB-202ENST00000381551 ACEP12821 1306 aa21.51■■□□□ 1.03
PDGFB-202ENST00000381551 KIF7Q2M1P5 1343 aa21.51■■□□□ 1.03
PDGFB-202ENST00000381551 PSME1Q06323 249 aa21.5■■□□□ 1.03
PDGFB-202ENST00000381551 POLR3GLQ9BT43 218 aa21.5■■□□□ 1.03
PDGFB-202ENST00000381551 TOPAZ1Q8N9V7 1692 aa21.5■■□□□ 1.03
PDGFB-202ENST00000381551 POLR3AO14802 1390 aaPredicted RBP21.49■■□□□ 1.03
PDGFB-202ENST00000381551 ITSN1Q15811 1721 aa21.49■■□□□ 1.03
PDGFB-202ENST00000381551 NPHP3Q7Z494 1330 aa21.49■■□□□ 1.03
PDGFB-202ENST00000381551 KRT28Q7Z3Y7 464 aa21.48■■□□□ 1.03
PDGFB-202ENST00000381551 SOS2Q07890 1332 aaPredicted RBP21.48■■□□□ 1.03
PDGFB-202ENST00000381551 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
PDGFB-202ENST00000381551 KIF1AQ12756 1690 aa21.47■■□□□ 1.03
PDGFB-202ENST00000381551 ZNF692Q9BU19 519 aaPredicted RBP21.47■■□□□ 1.03
PDGFB-202ENST00000381551 NINLQ9Y2I6 1382 aa21.47■■□□□ 1.03
PDGFB-202ENST00000381551 HSPA1LP34931 641 aa21.46■■□□□ 1.03
PDGFB-202ENST00000381551 XPCQ01831 940 aaPredicted RBP21.46■■□□□ 1.03
PDGFB-202ENST00000381551 CCDC7Q96M83 1385 aa21.46■■□□□ 1.03
PDGFB-202ENST00000381551 TERF2IPQ9NYB0 399 aa21.45■■□□□ 1.02
PDGFB-202ENST00000381551 CPSF1Q10570 1443 aaKnown RBP21.45■■□□□ 1.02
PDGFB-202ENST00000381551 NHSL1Q5SYE7 1610 aa21.44■■□□□ 1.02
PDGFB-202ENST00000381551 AHDC1Q5TGY3 1603 aaPredicted RBP21.44■■□□□ 1.02
PDGFB-202ENST00000381551 CD163L1Q9NR16 1453 aa21.44■■□□□ 1.02
PDGFB-202ENST00000381551 HDGFL2Q7Z4V5 671 aaPredicted RBP21.42■■□□□ 1.02
PDGFB-202ENST00000381551 PXDNQ92626 1479 aa21.42■■□□□ 1.02
PDGFB-202ENST00000381551 LRRC59Q96AG4 307 aaKnown RBP21.41■■□□□ 1.02
PDGFB-202ENST00000381551 A0A1W2PP64 1363 aa21.39■■□□□ 1.02
PDGFB-202ENST00000381551 KTN1Q86UP2 1357 aaKnown RBP21.39■■□□□ 1.02
PDGFB-202ENST00000381551 ANKRD36BQ8N2N9 1353 aa21.39■■□□□ 1.02
PDGFB-202ENST00000381551 PHLPP1O60346 1717 aa21.39■■□□□ 1.01
PDGFB-202ENST00000381551 PANK3Q9H999 370 aa21.39■■□□□ 1.01
PDGFB-202ENST00000381551 USP6P35125 1406 aa21.38■■□□□ 1.01
PDGFB-202ENST00000381551 SSH2Q76I76 1423 aa21.38■■□□□ 1.01
PDGFB-202ENST00000381551 SBNO1A3KN83 1393 aa21.38■■□□□ 1.01
PDGFB-202ENST00000381551 ZNF316A6NFI3 1004 aaPredicted RBP21.38■■□□□ 1.01
PDGFB-202ENST00000381551 MYOM1P52179 1685 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms