RNA–Protein interactions for RNA: ENST00000381031.7

TTC38-201, Transcript of tetratricopeptide repeat domain 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC38, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-201ENST00000381031 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
TTC38-201ENST00000381031 ZFYVE16Q7Z3T8 1539 aa17.67■□□□□ 0.42
TTC38-201ENST00000381031 TET3O43151 1660 aa17.67■□□□□ 0.42
TTC38-201ENST00000381031 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
TTC38-201ENST00000381031 DEPDC5O75140 1603 aa17.67■□□□□ 0.42
TTC38-201ENST00000381031 RUNDC1Q96C34 613 aa17.67■□□□□ 0.42
TTC38-201ENST00000381031 SHROOM2Q13796 1616 aa17.67■□□□□ 0.42
TTC38-201ENST00000381031 GZF1Q9H116 711 aaPredicted RBP17.67■□□□□ 0.42
TTC38-201ENST00000381031 L1TD1Q5T7N2 865 aaKnown RBP17.66■□□□□ 0.42
TTC38-201ENST00000381031 STAC3Q96MF2 364 aa17.66■□□□□ 0.42
TTC38-201ENST00000381031 UPF2Q9HAU5 1272 aaKnown RBP17.66■□□□□ 0.42
TTC38-201ENST00000381031 MORC1Q86VD1 984 aa17.65■□□□□ 0.42
TTC38-201ENST00000381031 CHD1O14646 1710 aa17.65■□□□□ 0.42
TTC38-201ENST00000381031 MCM4P33991 863 aa17.64■□□□□ 0.41
TTC38-201ENST00000381031 SLC12A5Q9H2X9 1139 aa17.64■□□□□ 0.41
TTC38-201ENST00000381031 FSD2A1L4K1 749 aa17.64■□□□□ 0.41
TTC38-201ENST00000381031 MROH2AA6NES4 1674 aa17.64■□□□□ 0.41
TTC38-201ENST00000381031 ZMYM3Q14202 1370 aa17.63■□□□□ 0.41
TTC38-201ENST00000381031 MYOM2P54296 1465 aa17.63■□□□□ 0.41
TTC38-201ENST00000381031 RWDD1Q9H446 243 aaPredicted RBP17.62■□□□□ 0.41
TTC38-201ENST00000381031 VWDEQ8N2E2 1590 aa17.62■□□□□ 0.41
TTC38-201ENST00000381031 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
TTC38-201ENST00000381031 MYO3AQ8NEV4 1616 aa17.62■□□□□ 0.41
TTC38-201ENST00000381031 MFAP1P55081 439 aaKnown RBP17.62■□□□□ 0.41
TTC38-201ENST00000381031 WDR63Q8IWG1 891 aa17.62■□□□□ 0.41
TTC38-201ENST00000381031 IFT172Q9UG01 1749 aa17.62■□□□□ 0.41
TTC38-201ENST00000381031 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
TTC38-201ENST00000381031 MTHFSP49914 203 aa17.61■□□□□ 0.41
TTC38-201ENST00000381031 GOLGA6L3A6NEY3 463 aa17.6■□□□□ 0.41
TTC38-201ENST00000381031 C22orf23Q9BZE7 217 aa17.6■□□□□ 0.41
TTC38-201ENST00000381031 ZNF518AQ6AHZ1 1483 aa17.6■□□□□ 0.41
TTC38-201ENST00000381031 KIF3BO15066 747 aa17.59■□□□□ 0.41
TTC38-201ENST00000381031 AAMPQ13685 434 aa17.59■□□□□ 0.41
TTC38-201ENST00000381031 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
TTC38-201ENST00000381031 TRAK1Q9UPV9 953 aa17.58■□□□□ 0.41
TTC38-201ENST00000381031 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.4
TTC38-201ENST00000381031 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
TTC38-201ENST00000381031 KIF1BO60333 1816 aa17.57■□□□□ 0.4
TTC38-201ENST00000381031 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
TTC38-201ENST00000381031 NEURL4Q96JN8 1562 aa17.57■□□□□ 0.4
TTC38-201ENST00000381031 ZC3H13Q5T200 1668 aaKnown RBP17.57■□□□□ 0.4
TTC38-201ENST00000381031 TRAK2O60296 914 aa17.56■□□□□ 0.4
TTC38-201ENST00000381031 CCDC27Q2M243 656 aa17.56■□□□□ 0.4
TTC38-201ENST00000381031 KANK1Q14678 1352 aa17.56■□□□□ 0.4
TTC38-201ENST00000381031 DZIP1LQ8IYY4 767 aaKnown RBP17.56■□□□□ 0.4
TTC38-201ENST00000381031 CHMP5Q9NZZ3 219 aa17.56■□□□□ 0.4
TTC38-201ENST00000381031 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
TTC38-201ENST00000381031 NOS1P29475 1434 aa17.56■□□□□ 0.4
TTC38-201ENST00000381031 ZKSCAN2Q63HK3 967 aa17.55■□□□□ 0.4
TTC38-201ENST00000381031 QRICH2Q9H0J4 1663 aa17.55■□□□□ 0.4
TTC38-201ENST00000381031 FTSJ3Q8IY81 847 aaKnown RBP17.54■□□□□ 0.4
TTC38-201ENST00000381031 ATP7AQ04656 1500 aa17.54■□□□□ 0.4
TTC38-201ENST00000381031 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
TTC38-201ENST00000381031 TRIM27P14373 513 aa17.53■□□□□ 0.4
TTC38-201ENST00000381031 MYH16Q9H6N6 1097 aa17.53■□□□□ 0.4
TTC38-201ENST00000381031 INO80Q9ULG1 1556 aaPredicted RBP17.53■□□□□ 0.4
TTC38-201ENST00000381031 TMEM132EQ6IEE7 984 aa17.53■□□□□ 0.4
TTC38-201ENST00000381031 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
TTC38-201ENST00000381031 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
TTC38-201ENST00000381031 EXOSC9Q06265 439 aaKnown RBP17.52■□□□□ 0.4
TTC38-201ENST00000381031 ADGRB2O60241 1585 aa17.52■□□□□ 0.4
TTC38-201ENST00000381031 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
TTC38-201ENST00000381031 SSH1Q8WYL5 1049 aa17.51■□□□□ 0.39
TTC38-201ENST00000381031 PPRC1Q5VV67 1664 aaKnown RBP17.51■□□□□ 0.39
TTC38-201ENST00000381031 CD109Q6YHK3 1445 aa17.5■□□□□ 0.39
TTC38-201ENST00000381031 CHGAP10645 457 aaKnown RBP17.5■□□□□ 0.39
TTC38-201ENST00000381031 CLCN1P35523 988 aa17.5■□□□□ 0.39
TTC38-201ENST00000381031 ITPRIPQ8IWB1 547 aa17.5■□□□□ 0.39
TTC38-201ENST00000381031 USP32Q8NFA0 1604 aa17.5■□□□□ 0.39
TTC38-201ENST00000381031 EFCAB6Q5THR3 1501 aa17.5■□□□□ 0.39
TTC38-201ENST00000381031 DDIT3P35638 169 aa17.5■□□□□ 0.39
TTC38-201ENST00000381031 HDAC1Q13547 482 aaPredicted RBP17.5■□□□□ 0.39
TTC38-201ENST00000381031 NAP1L5Q96NT1 182 aaPredicted RBP17.5■□□□□ 0.39
TTC38-201ENST00000381031 NCOA3Q9Y6Q9 1424 aa17.49■□□□□ 0.39
TTC38-201ENST00000381031 ERBB4Q15303 1308 aa17.49■□□□□ 0.39
TTC38-201ENST00000381031 ADGRB1O14514 1584 aa17.49■□□□□ 0.39
TTC38-201ENST00000381031 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
TTC38-201ENST00000381031 CFAP53Q96M91 514 aa17.49■□□□□ 0.39
TTC38-201ENST00000381031 HSCBQ8IWL3 235 aa17.48■□□□□ 0.39
TTC38-201ENST00000381031 SMC5Q8IY18 1101 aa17.48■□□□□ 0.39
TTC38-201ENST00000381031 TMEM57Q8N5G2 664 aa17.48■□□□□ 0.39
TTC38-201ENST00000381031 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
TTC38-201ENST00000381031 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
TTC38-201ENST00000381031 ADGRB3O60242 1522 aa17.47■□□□□ 0.39
TTC38-201ENST00000381031 CFAP65Q6ZU64 1925 aaKnown RBP17.47■□□□□ 0.39
TTC38-201ENST00000381031 GRPEL1Q9HAV7 217 aa17.47■□□□□ 0.39
TTC38-201ENST00000381031 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
TTC38-201ENST00000381031 MRE11P49959 708 aa17.47■□□□□ 0.39
TTC38-201ENST00000381031 GAS2L3Q86XJ1 694 aa17.46■□□□□ 0.39
TTC38-201ENST00000381031 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.39
TTC38-201ENST00000381031 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
TTC38-201ENST00000381031 C14orf93Q9H972 538 aaKnown RBP17.45■□□□□ 0.38
TTC38-201ENST00000381031 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
TTC38-201ENST00000381031 DDX19BQ9UMR2 479 aa17.45■□□□□ 0.38
TTC38-201ENST00000381031 TULP4Q9NRJ4 1543 aa17.44■□□□□ 0.38
TTC38-201ENST00000381031 PPLO60437 1756 aa17.44■□□□□ 0.38
TTC38-201ENST00000381031 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
TTC38-201ENST00000381031 TMPOP42166 694 aaKnown RBP17.44■□□□□ 0.38
TTC38-201ENST00000381031 LNPKQ9C0E8 428 aa17.44■□□□□ 0.38
TTC38-201ENST00000381031 ZBTB40Q9NUA8 1239 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms