RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 CDC42BPGQ6DT37 1551 aa21.34■■□□□ 1.01
VCX3B-201ENST00000381029 ATF3P18847 181 aa21.33■■□□□ 1.01
VCX3B-201ENST00000381029 ROBO1Q9Y6N7 1651 aa21.33■■□□□ 1
VCX3B-201ENST00000381029 TONSLQ96HA7 1378 aa21.33■■□□□ 1
VCX3B-201ENST00000381029 SOCS7O14512 581 aa21.32■■□□□ 1
VCX3B-201ENST00000381029 HSPA1LP34931 641 aa21.32■■□□□ 1
VCX3B-201ENST00000381029 PRAM1Q96QH2 718 aa21.32■■□□□ 1
VCX3B-201ENST00000381029 TRAK1Q9UPV9 953 aa21.32■■□□□ 1
VCX3B-201ENST00000381029 GPRASP1Q5JY77 1395 aa21.31■■□□□ 1
VCX3B-201ENST00000381029 ARHGEF28Q8N1W1 1705 aaKnown RBP21.3■■□□□ 1
VCX3B-201ENST00000381029 C1orf167Q5SNV9 1468 aa21.3■■□□□ 1
VCX3B-201ENST00000381029 SCAF1Q9H7N4 1312 aaKnown RBP21.29■■□□□ 1
VCX3B-201ENST00000381029 ADGRB2O60241 1585 aa21.28■■□□□ 1
VCX3B-201ENST00000381029 BRINP3Q76B58 766 aa21.28■■□□□ 1
VCX3B-201ENST00000381029 RALGAPBQ86X10 1494 aa21.26■□□□□ 0.99
VCX3B-201ENST00000381029 TIMELESSQ9UNS1 1208 aa21.25■□□□□ 0.99
VCX3B-201ENST00000381029 AHDC1Q5TGY3 1603 aaPredicted RBP21.24■□□□□ 0.99
VCX3B-201ENST00000381029 FMN2Q9NZ56 1722 aa21.24■□□□□ 0.99
VCX3B-201ENST00000381029 SAFB2Q14151 953 aaKnown RBP eCLIP21.23■□□□□ 0.99
VCX3B-201ENST00000381029 CCER1Q8TC90 406 aaPredicted RBP21.22■□□□□ 0.99
VCX3B-201ENST00000381029 POGKQ9P215 609 aa21.22■□□□□ 0.99
VCX3B-201ENST00000381029 ROCK2O75116 1388 aaKnown RBP21.22■□□□□ 0.99
VCX3B-201ENST00000381029 COL16A1Q07092 1604 aaPredicted RBP21.2■□□□□ 0.98
VCX3B-201ENST00000381029 ORAI2Q96SN7 254 aa21.2■□□□□ 0.98
VCX3B-201ENST00000381029 NHSL1Q5SYE7 1610 aa21.19■□□□□ 0.98
VCX3B-201ENST00000381029 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
VCX3B-201ENST00000381029 MINK1Q8N4C8 1332 aaPredicted RBP21.18■□□□□ 0.98
VCX3B-201ENST00000381029 HIRIP3Q9BW71 556 aaPredicted RBP21.17■□□□□ 0.98
VCX3B-201ENST00000381029 PRR36Q9H6K5 1346 aa21.16■□□□□ 0.98
VCX3B-201ENST00000381029 WASLO00401 505 aaPredicted RBP21.16■□□□□ 0.98
VCX3B-201ENST00000381029 ANKARQ7Z5J8 1434 aa21.15■□□□□ 0.98
VCX3B-201ENST00000381029 CENPJQ9HC77 1338 aaPredicted RBP21.15■□□□□ 0.98
VCX3B-201ENST00000381029 PHLPP1O60346 1717 aa21.15■□□□□ 0.98
VCX3B-201ENST00000381029 DDX17Q92841 729 aaKnown RBP21.14■□□□□ 0.97
VCX3B-201ENST00000381029 TULP4Q9NRJ4 1543 aa21.14■□□□□ 0.97
VCX3B-201ENST00000381029 NUTM2FA1L443 756 aa21.13■□□□□ 0.97
VCX3B-201ENST00000381029 SOS2Q07890 1332 aaPredicted RBP21.12■□□□□ 0.97
VCX3B-201ENST00000381029 CARD11Q9BXL7 1154 aa21.12■□□□□ 0.97
VCX3B-201ENST00000381029 ATP7BP35670 1465 aa21.12■□□□□ 0.97
VCX3B-201ENST00000381029 ESCO1Q5FWF5 840 aa21.11■□□□□ 0.97
VCX3B-201ENST00000381029 QRICH2Q9H0J4 1663 aa21.11■□□□□ 0.97
VCX3B-201ENST00000381029 RGPD8O14715 1765 aaPredicted RBP21.1■□□□□ 0.97
VCX3B-201ENST00000381029 PXDNQ92626 1479 aa21.1■□□□□ 0.97
VCX3B-201ENST00000381029 SBNO2Q9Y2G9 1366 aa21.1■□□□□ 0.97
VCX3B-201ENST00000381029 CDK19Q9BWU1 502 aa21.08■□□□□ 0.97
VCX3B-201ENST00000381029 EIF3AQ14152 1382 aaKnown RBP21.08■□□□□ 0.96
VCX3B-201ENST00000381029 KIF1AQ12756 1690 aa21.07■□□□□ 0.96
VCX3B-201ENST00000381029 JCADQ9P266 1359 aa21.07■□□□□ 0.96
VCX3B-201ENST00000381029 PHF8Q9UPP1 1060 aa21.06■□□□□ 0.96
VCX3B-201ENST00000381029 NPHP3Q7Z494 1330 aa21.05■□□□□ 0.96
VCX3B-201ENST00000381029 FOXO3O43524 673 aa21.05■□□□□ 0.96
VCX3B-201ENST00000381029 NUDT16Q96DE0 195 aaKnown RBP21.05■□□□□ 0.96
VCX3B-201ENST00000381029 TOPAZ1Q8N9V7 1692 aa21.04■□□□□ 0.96
VCX3B-201ENST00000381029 SHPRHQ149N8 1683 aa21.03■□□□□ 0.96
VCX3B-201ENST00000381029 TESK2Q96S53 571 aa21.03■□□□□ 0.96
VCX3B-201ENST00000381029 PNPLA6Q8IY17 1366 aa21.02■□□□□ 0.96
VCX3B-201ENST00000381029 LRRC59Q96AG4 307 aaKnown RBP21.02■□□□□ 0.96
VCX3B-201ENST00000381029 MED1Q15648 1581 aaPredicted RBP21.02■□□□□ 0.95
VCX3B-201ENST00000381029 CABP2Q9NPB3 220 aa21■□□□□ 0.95
VCX3B-201ENST00000381029 CCDC61Q9Y6R9 512 aa21■□□□□ 0.95
VCX3B-201ENST00000381029 POLR3AO14802 1390 aaPredicted RBP20.99■□□□□ 0.95
VCX3B-201ENST00000381029 PLEKHG3A1L390 1219 aa20.99■□□□□ 0.95
VCX3B-201ENST00000381029 XPCQ01831 940 aaPredicted RBP20.99■□□□□ 0.95
VCX3B-201ENST00000381029 PMFBP1Q8TBY8 1022 aa20.99■□□□□ 0.95
VCX3B-201ENST00000381029 USP47Q96K76 1375 aa20.98■□□□□ 0.95
VCX3B-201ENST00000381029 LRP6O75581 1613 aa20.98■□□□□ 0.95
VCX3B-201ENST00000381029 ST20-MTHFSA0A0A6YYL1 179 aa20.98■□□□□ 0.95
VCX3B-201ENST00000381029 EVC2Q86UK5 1308 aa20.98■□□□□ 0.95
VCX3B-201ENST00000381029 ITSN1Q15811 1721 aa20.98■□□□□ 0.95
VCX3B-201ENST00000381029 KRT28Q7Z3Y7 464 aa20.97■□□□□ 0.95
VCX3B-201ENST00000381029 SPATA31A6Q5VVP1 1343 aa20.97■□□□□ 0.95
VCX3B-201ENST00000381029 SPATA31A3Q5VYP0 1347 aa20.97■□□□□ 0.95
VCX3B-201ENST00000381029 TRPM3Q9HCF6 1732 aaPredicted RBP20.96■□□□□ 0.95
VCX3B-201ENST00000381029 COL22A1Q8NFW1 1626 aaPredicted RBP20.96■□□□□ 0.95
VCX3B-201ENST00000381029 SBNO1A3KN83 1393 aa20.96■□□□□ 0.95
VCX3B-201ENST00000381029 SRPK2P78362 688 aaKnown RBP20.95■□□□□ 0.94
VCX3B-201ENST00000381029 PPIP5K1Q6PFW1 1433 aa20.94■□□□□ 0.94
VCX3B-201ENST00000381029 ACEP12821 1306 aa20.93■□□□□ 0.94
VCX3B-201ENST00000381029 TNS3Q68CZ2 1445 aa20.93■□□□□ 0.94
VCX3B-201ENST00000381029 PUS7Q96PZ0 661 aaKnown RBP20.91■□□□□ 0.94
VCX3B-201ENST00000381029 ALS2Q96Q42 1657 aa20.9■□□□□ 0.94
VCX3B-201ENST00000381029 ATAD2Q6PL18 1390 aa20.9■□□□□ 0.94
VCX3B-201ENST00000381029 PSME1Q06323 249 aa20.9■□□□□ 0.94
VCX3B-201ENST00000381029 CABP1Q9NZU7 370 aa20.9■□□□□ 0.94
VCX3B-201ENST00000381029 SSH2Q76I76 1423 aa20.89■□□□□ 0.94
VCX3B-201ENST00000381029 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.93
VCX3B-201ENST00000381029 RGS17Q9UGC6 210 aaPredicted RBP20.88■□□□□ 0.93
VCX3B-201ENST00000381029 CPSF1Q10570 1443 aaKnown RBP20.87■□□□□ 0.93
VCX3B-201ENST00000381029 CD163L1Q9NR16 1453 aa20.87■□□□□ 0.93
VCX3B-201ENST00000381029 USP6P35125 1406 aa20.85■□□□□ 0.93
VCX3B-201ENST00000381029 ARHGEF10O15013 1369 aa20.85■□□□□ 0.93
VCX3B-201ENST00000381029 SLC24A1O60721 1099 aa20.84■□□□□ 0.93
VCX3B-201ENST00000381029 BRD4O60885 1362 aaPredicted RBP20.83■□□□□ 0.92
VCX3B-201ENST00000381029 NUTM2BA6NNL0 878 aaPredicted RBP20.82■□□□□ 0.92
VCX3B-201ENST00000381029 NUTM2EB1AL46 878 aaPredicted RBP20.82■□□□□ 0.92
VCX3B-201ENST00000381029 HSPA5P11021 654 aaKnown RBP20.82■□□□□ 0.92
VCX3B-201ENST00000381029 NUTM2AQ8IVF1 878 aaPredicted RBP20.82■□□□□ 0.92
VCX3B-201ENST00000381029 CRYBG1Q9Y4K1 1723 aa20.81■□□□□ 0.92
VCX3B-201ENST00000381029 AKAP12Q02952 1782 aa20.81■□□□□ 0.92
VCX3B-201ENST00000381029 ABCA3Q99758 1704 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms