RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 RRS1Q15050 365 aaKnown RBP15.9■□□□□ 0.14
CDX2-201ENST00000381020 MYO5CQ9NQX4 1742 aa15.89■□□□□ 0.13
CDX2-201ENST00000381020 DUSP27Q5VZP5 1158 aa15.88■□□□□ 0.13
CDX2-201ENST00000381020 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
CDX2-201ENST00000381020 MAST1Q9Y2H9 1570 aa15.88■□□□□ 0.13
CDX2-201ENST00000381020 SLC4A10Q6U841 1118 aa15.88■□□□□ 0.13
CDX2-201ENST00000381020 DZIP1LQ8IYY4 767 aaKnown RBP15.87■□□□□ 0.13
CDX2-201ENST00000381020 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
CDX2-201ENST00000381020 COL17A1Q9UMD9 1497 aaPredicted RBP15.87■□□□□ 0.13
CDX2-201ENST00000381020 GPRASP1Q5JY77 1395 aa15.86■□□□□ 0.13
CDX2-201ENST00000381020 NUDT16Q96DE0 195 aaKnown RBP15.86■□□□□ 0.13
CDX2-201ENST00000381020 UHRF1BP1LA0JNW5 1464 aa15.86■□□□□ 0.13
CDX2-201ENST00000381020 ZCCHC11Q5TAX3 1644 aaKnown RBP15.86■□□□□ 0.13
CDX2-201ENST00000381020 THUMPD2Q9BTF0 503 aaKnown RBP15.85■□□□□ 0.13
CDX2-201ENST00000381020 ATAD2Q6PL18 1390 aa15.85■□□□□ 0.13
CDX2-201ENST00000381020 NME9Q86XW9 330 aa15.85■□□□□ 0.13
CDX2-201ENST00000381020 RBM33Q96EV2 1170 aaKnown RBP15.84■□□□□ 0.13
CDX2-201ENST00000381020 NLRP6P59044 892 aa15.84■□□□□ 0.13
CDX2-201ENST00000381020 LMOD3Q0VAK6 560 aa15.84■□□□□ 0.13
CDX2-201ENST00000381020 CCDC61Q9Y6R9 512 aa15.84■□□□□ 0.13
CDX2-201ENST00000381020 ATP10AO60312 1499 aa15.84■□□□□ 0.13
CDX2-201ENST00000381020 CHMP4BQ9H444 224 aaKnown RBP15.84■□□□□ 0.13
CDX2-201ENST00000381020 UGGT1Q9NYU2 1555 aa15.84■□□□□ 0.13
CDX2-201ENST00000381020 NECTIN2Q92692 538 aa15.84■□□□□ 0.13
CDX2-201ENST00000381020 FAM161AQ3B820 660 aa15.83■□□□□ 0.12
CDX2-201ENST00000381020 SLKQ9H2G2 1235 aaPredicted RBP15.83■□□□□ 0.12
CDX2-201ENST00000381020 ADCY10Q96PN6 1610 aa15.83■□□□□ 0.12
CDX2-201ENST00000381020 ABCC1P33527 1531 aa15.83■□□□□ 0.12
CDX2-201ENST00000381020 MFAP1P55081 439 aaKnown RBP15.82■□□□□ 0.12
CDX2-201ENST00000381020 EMILIN1Q9Y6C2 1016 aa15.82■□□□□ 0.12
CDX2-201ENST00000381020 TMPOP42166 694 aaKnown RBP15.82■□□□□ 0.12
CDX2-201ENST00000381020 NPATQ14207 1427 aa15.81■□□□□ 0.12
CDX2-201ENST00000381020 SULT6B1Q6IMI4 303 aa15.81■□□□□ 0.12
CDX2-201ENST00000381020 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
CDX2-201ENST00000381020 PLEKHH1Q9ULM0 1364 aa15.8■□□□□ 0.12
CDX2-201ENST00000381020 FYB1O15117 783 aa15.8■□□□□ 0.12
CDX2-201ENST00000381020 KDM5CP41229 1560 aa15.8■□□□□ 0.12
CDX2-201ENST00000381020 CDC42BPBQ9Y5S2 1711 aa15.8■□□□□ 0.12
CDX2-201ENST00000381020 ASXL1Q8IXJ9 1541 aa15.79■□□□□ 0.12
CDX2-201ENST00000381020 LRPPRCP42704 1394 aaKnown RBP15.79■□□□□ 0.12
CDX2-201ENST00000381020 POGZQ7Z3K3 1410 aa15.79■□□□□ 0.12
CDX2-201ENST00000381020 YEATS2Q9ULM3 1422 aa15.79■□□□□ 0.12
CDX2-201ENST00000381020 NCKAP5LQ9HCH0 1330 aa15.79■□□□□ 0.12
CDX2-201ENST00000381020 STK31Q9BXU1 1019 aa15.79■□□□□ 0.12
CDX2-201ENST00000381020 WDR63Q8IWG1 891 aa15.79■□□□□ 0.12
CDX2-201ENST00000381020 THEMISQ8N1K5 641 aaPredicted RBP15.79■□□□□ 0.12
CDX2-201ENST00000381020 WASLO00401 505 aaPredicted RBP15.78■□□□□ 0.12
CDX2-201ENST00000381020 PSME1Q06323 249 aa15.78■□□□□ 0.12
CDX2-201ENST00000381020 ANKRD45Q5TZF3 282 aa15.78■□□□□ 0.12
CDX2-201ENST00000381020 EIF2AK4Q9P2K8 1649 aaKnown RBP15.78■□□□□ 0.12
CDX2-201ENST00000381020 CSB-PGBD3P0DP91 1061 aa15.78■□□□□ 0.12
CDX2-201ENST00000381020 DDX19BQ9UMR2 479 aa15.78■□□□□ 0.12
CDX2-201ENST00000381020 PDE3AQ14432 1141 aa15.77■□□□□ 0.12
CDX2-201ENST00000381020 GNAI1P63096 354 aa15.77■□□□□ 0.11
CDX2-201ENST00000381020 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.11
CDX2-201ENST00000381020 DCTN1Q14203 1278 aa15.77■□□□□ 0.11
CDX2-201ENST00000381020 ABTB2Q8N961 1025 aa15.77■□□□□ 0.11
CDX2-201ENST00000381020 NOB1Q9ULX3 412 aaKnown RBP15.76■□□□□ 0.11
CDX2-201ENST00000381020 LNPKQ9C0E8 428 aa15.76■□□□□ 0.11
CDX2-201ENST00000381020 MSH5O43196 834 aa15.75■□□□□ 0.11
CDX2-201ENST00000381020 RARSP54136 660 aaKnown RBP15.75■□□□□ 0.11
CDX2-201ENST00000381020 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
CDX2-201ENST00000381020 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
CDX2-201ENST00000381020 OS9Q13438 667 aaPredicted RBP15.74■□□□□ 0.11
CDX2-201ENST00000381020 MAGI2Q86UL8 1455 aa15.74■□□□□ 0.11
CDX2-201ENST00000381020 DEKP35659 375 aaKnown RBP15.74■□□□□ 0.11
CDX2-201ENST00000381020 C1orf115Q9H7X2 142 aa15.74■□□□□ 0.11
CDX2-201ENST00000381020 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
CDX2-201ENST00000381020 BACH2Q9BYV9 841 aa15.74■□□□□ 0.11
CDX2-201ENST00000381020 AMOTL2Q9Y2J4 779 aa15.74■□□□□ 0.11
CDX2-201ENST00000381020 KDM5DQ9BY66 1539 aa15.73■□□□□ 0.11
CDX2-201ENST00000381020 FCHSD2O94868 740 aa15.73■□□□□ 0.11
CDX2-201ENST00000381020 ESCO1Q5FWF5 840 aa15.73■□□□□ 0.11
CDX2-201ENST00000381020 KIF16BQ96L93 1317 aa15.73■□□□□ 0.11
CDX2-201ENST00000381020 EIF2S2P20042 333 aaKnown RBP15.72■□□□□ 0.11
CDX2-201ENST00000381020 SSH1Q8WYL5 1049 aa15.72■□□□□ 0.11
CDX2-201ENST00000381020 RTN4Q9NQC3 1192 aaKnown RBP15.72■□□□□ 0.11
CDX2-201ENST00000381020 ANKRD36BQ8N2N9 1353 aa15.72■□□□□ 0.11
CDX2-201ENST00000381020 XPCQ01831 940 aaPredicted RBP15.72■□□□□ 0.11
CDX2-201ENST00000381020 TWISTNBQ3B726 338 aaPredicted RBP15.72■□□□□ 0.11
CDX2-201ENST00000381020 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
CDX2-201ENST00000381020 ZFYVE16Q7Z3T8 1539 aa15.71■□□□□ 0.11
CDX2-201ENST00000381020 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
CDX2-201ENST00000381020 HSP90AB1P08238 724 aaKnown RBP15.71■□□□□ 0.1
CDX2-201ENST00000381020 CASC1Q6TDU7 716 aa15.71■□□□□ 0.1
CDX2-201ENST00000381020 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.1
CDX2-201ENST00000381020 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.1
CDX2-201ENST00000381020 TNNQ9UQP3 1299 aa15.7■□□□□ 0.1
CDX2-201ENST00000381020 A0A1W2PP64 1363 aa15.7■□□□□ 0.1
CDX2-201ENST00000381020 ATF7IPQ6VMQ6 1270 aa15.7■□□□□ 0.1
CDX2-201ENST00000381020 MIS18AQ9NYP9 233 aa15.7■□□□□ 0.1
CDX2-201ENST00000381020 CROCC2H7BZ55 1655 aa15.7■□□□□ 0.1
CDX2-201ENST00000381020 PTPRTO14522 1441 aa15.69■□□□□ 0.1
CDX2-201ENST00000381020 HSCBQ8IWL3 235 aa15.69■□□□□ 0.1
CDX2-201ENST00000381020 RIMS2Q9UQ26 1411 aa15.69■□□□□ 0.1
CDX2-201ENST00000381020 PRDM15P57071 1507 aaPredicted RBP15.68■□□□□ 0.1
CDX2-201ENST00000381020 NFE2L2Q16236 605 aa15.68■□□□□ 0.1
CDX2-201ENST00000381020 ZMYM3Q14202 1370 aa15.68■□□□□ 0.1
CDX2-201ENST00000381020 TNRQ92752 1358 aa15.68■□□□□ 0.1
CDX2-201ENST00000381020 MCM10Q7L590 875 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms