RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
EIF3CL-201ENST00000380876 NUTM2DQ5VT03 806 aaPredicted RBP16.98■□□□□ 0.31
EIF3CL-201ENST00000380876 RBM10P98175 930 aaKnown RBP16.97■□□□□ 0.31
EIF3CL-201ENST00000380876 SAFB2Q14151 953 aaKnown RBP eCLIP16.97■□□□□ 0.31
EIF3CL-201ENST00000380876 IFT140Q96RY7 1462 aa16.96■□□□□ 0.31
EIF3CL-201ENST00000380876 TMEM132EQ6IEE7 984 aa16.96■□□□□ 0.31
EIF3CL-201ENST00000380876 TRIM27P14373 513 aa16.96■□□□□ 0.31
EIF3CL-201ENST00000380876 NCLP19338 710 aaKnown RBP16.96■□□□□ 0.31
EIF3CL-201ENST00000380876 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
EIF3CL-201ENST00000380876 C1orf115Q9H7X2 142 aa16.96■□□□□ 0.31
EIF3CL-201ENST00000380876 SCAF11Q99590 1463 aaKnown RBP16.96■□□□□ 0.31
EIF3CL-201ENST00000380876 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
EIF3CL-201ENST00000380876 SSH1Q8WYL5 1049 aa16.95■□□□□ 0.3
EIF3CL-201ENST00000380876 NOB1Q9ULX3 412 aaKnown RBP16.95■□□□□ 0.3
EIF3CL-201ENST00000380876 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
EIF3CL-201ENST00000380876 SYNJ2O15056 1496 aa16.95■□□□□ 0.3
EIF3CL-201ENST00000380876 DDX11L8A8MPP1 907 aa16.94■□□□□ 0.3
EIF3CL-201ENST00000380876 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
EIF3CL-201ENST00000380876 ABCA8O94911 1581 aa16.94■□□□□ 0.3
EIF3CL-201ENST00000380876 ABCC2Q92887 1545 aa16.93■□□□□ 0.3
EIF3CL-201ENST00000380876 NUP160Q12769 1436 aa16.93■□□□□ 0.3
EIF3CL-201ENST00000380876 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
EIF3CL-201ENST00000380876 RRP9O43818 475 aaKnown RBP16.93■□□□□ 0.3
EIF3CL-201ENST00000380876 SSFA2P28290 1259 aa16.93■□□□□ 0.3
EIF3CL-201ENST00000380876 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
EIF3CL-201ENST00000380876 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
EIF3CL-201ENST00000380876 RTEL1-TNFRSF6BF6WH68 1400 aa16.91■□□□□ 0.3
EIF3CL-201ENST00000380876 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
EIF3CL-201ENST00000380876 CDC42BPBQ9Y5S2 1711 aa16.9■□□□□ 0.3
EIF3CL-201ENST00000380876 NINLQ9Y2I6 1382 aa16.9■□□□□ 0.3
EIF3CL-201ENST00000380876 ANKRD45Q5TZF3 282 aa16.9■□□□□ 0.3
EIF3CL-201ENST00000380876 SYNMO15061 1565 aa16.89■□□□□ 0.29
EIF3CL-201ENST00000380876 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
EIF3CL-201ENST00000380876 KIF3BO15066 747 aa16.89■□□□□ 0.29
EIF3CL-201ENST00000380876 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.29
EIF3CL-201ENST00000380876 WDR63Q8IWG1 891 aa16.89■□□□□ 0.29
EIF3CL-201ENST00000380876 CHAMP1Q96JM3 812 aa16.89■□□□□ 0.29
EIF3CL-201ENST00000380876 GBP4Q96PP9 640 aa16.88■□□□□ 0.29
EIF3CL-201ENST00000380876 DDX49Q9Y6V7 483 aaKnown RBP16.88■□□□□ 0.29
EIF3CL-201ENST00000380876 ERVK-7P63135 1459 aa16.87■□□□□ 0.29
EIF3CL-201ENST00000380876 LAMC1P11047 1609 aa16.87■□□□□ 0.29
EIF3CL-201ENST00000380876 FOXD4L5Q5VV16 416 aaPredicted RBP16.87■□□□□ 0.29
EIF3CL-201ENST00000380876 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
EIF3CL-201ENST00000380876 FOXD4L4Q8WXT5 416 aaPredicted RBP16.87■□□□□ 0.29
EIF3CL-201ENST00000380876 CFAP53Q96M91 514 aa16.87■□□□□ 0.29
EIF3CL-201ENST00000380876 POLR3AO14802 1390 aaPredicted RBP16.87■□□□□ 0.29
EIF3CL-201ENST00000380876 NASPP49321 788 aaPredicted RBP16.86■□□□□ 0.29
EIF3CL-201ENST00000380876 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
EIF3CL-201ENST00000380876 NPC1L1Q9UHC9 1359 aa16.86■□□□□ 0.29
EIF3CL-201ENST00000380876 FAM13BQ9NYF5 915 aa16.85■□□□□ 0.29
EIF3CL-201ENST00000380876 MADDQ8WXG6 1647 aa16.85■□□□□ 0.29
EIF3CL-201ENST00000380876 MYOM1P52179 1685 aa16.85■□□□□ 0.29
EIF3CL-201ENST00000380876 DDX19BQ9UMR2 479 aa16.85■□□□□ 0.29
EIF3CL-201ENST00000380876 FBLN1P23142 703 aa16.84■□□□□ 0.29
EIF3CL-201ENST00000380876 GGNBP2Q9H3C7 697 aa16.84■□□□□ 0.29
EIF3CL-201ENST00000380876 SPAG9O60271 1321 aaKnown RBP16.84■□□□□ 0.29
EIF3CL-201ENST00000380876 MCTP1Q6DN14 999 aa16.84■□□□□ 0.29
EIF3CL-201ENST00000380876 NGEFQ8N5V2 710 aa16.84■□□□□ 0.29
EIF3CL-201ENST00000380876 R3HCC1Q9Y3T6 440 aaKnown RBP16.84■□□□□ 0.29
EIF3CL-201ENST00000380876 RAB3GAP1Q15042 981 aa16.83■□□□□ 0.29
EIF3CL-201ENST00000380876 UGGT1Q9NYU2 1555 aa16.83■□□□□ 0.29
EIF3CL-201ENST00000380876 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.29
EIF3CL-201ENST00000380876 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
EIF3CL-201ENST00000380876 KIF2CQ99661 725 aa16.83■□□□□ 0.28
EIF3CL-201ENST00000380876 CABP2Q9NPB3 220 aa16.83■□□□□ 0.28
EIF3CL-201ENST00000380876 TTC37Q6PGP7 1564 aa16.83■□□□□ 0.28
EIF3CL-201ENST00000380876 UNC13BO14795 1591 aa16.83■□□□□ 0.28
EIF3CL-201ENST00000380876 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
EIF3CL-201ENST00000380876 APBB1O00213 710 aa16.83■□□□□ 0.28
EIF3CL-201ENST00000380876 CAVIN1Q6NZI2 390 aaKnown RBP16.83■□□□□ 0.28
EIF3CL-201ENST00000380876 CHD1LQ86WJ1 897 aa16.83■□□□□ 0.28
EIF3CL-201ENST00000380876 DDIT3P35638 169 aa16.82■□□□□ 0.28
EIF3CL-201ENST00000380876 PKP1Q13835 747 aa16.82■□□□□ 0.28
EIF3CL-201ENST00000380876 MPNDQ8N594 471 aa16.82■□□□□ 0.28
EIF3CL-201ENST00000380876 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
EIF3CL-201ENST00000380876 IQGAP1P46940 1657 aa16.82■□□□□ 0.28
EIF3CL-201ENST00000380876 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
EIF3CL-201ENST00000380876 SMC5Q8IY18 1101 aa16.82■□□□□ 0.28
EIF3CL-201ENST00000380876 THUMPD2Q9BTF0 503 aaKnown RBP16.82■□□□□ 0.28
EIF3CL-201ENST00000380876 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 AK9Q5TCS8 1911 aa16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 MSNP26038 577 aaKnown RBP16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 RIPK4P57078 832 aa16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 XPCQ01831 940 aaPredicted RBP16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 ATP10AO60312 1499 aa16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 TBC1D9Q6ZT07 1266 aa16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 ZBTB40Q9NUA8 1239 aa16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
EIF3CL-201ENST00000380876 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
EIF3CL-201ENST00000380876 ANP32BQ92688 251 aaKnown RBP16.8■□□□□ 0.28
EIF3CL-201ENST00000380876 MAST1Q9Y2H9 1570 aa16.8■□□□□ 0.28
EIF3CL-201ENST00000380876 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
EIF3CL-201ENST00000380876 NUCB1Q02818 461 aa16.8■□□□□ 0.28
EIF3CL-201ENST00000380876 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
EIF3CL-201ENST00000380876 KDM5AP29375 1690 aaKnown RBP16.79■□□□□ 0.28
EIF3CL-201ENST00000380876 AAMPQ13685 434 aa16.79■□□□□ 0.28
EIF3CL-201ENST00000380876 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
EIF3CL-201ENST00000380876 K7ELQ4 463 aaPredicted RBP16.79■□□□□ 0.28
EIF3CL-201ENST00000380876 STK26Q9P289 416 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms