RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 CCDC102AQ96A19 550 aa9.58□□□□□ -0.88
SNAPC3-201ENST00000380799 PRDM9Q9NQV7 894 aa9.58□□□□□ -0.88
SNAPC3-201ENST00000380799 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
SNAPC3-201ENST00000380799 PKD2L1Q9P0L9 805 aa9.57□□□□□ -0.88
SNAPC3-201ENST00000380799 USB1Q9BQ65 265 aaKnown RBP9.56□□□□□ -0.88
SNAPC3-201ENST00000380799 MMP16P51512 607 aa9.55□□□□□ -0.88
SNAPC3-201ENST00000380799 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
SNAPC3-201ENST00000380799 HOXA2O43364 376 aa9.53□□□□□ -0.88
SNAPC3-201ENST00000380799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNAPC3-201ENST00000380799 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
SNAPC3-201ENST00000380799 TOR4AQ9NXH8 423 aa9.52□□□□□ -0.89
SNAPC3-201ENST00000380799 DXOO77932 396 aaKnown RBP9.51□□□□□ -0.89
SNAPC3-201ENST00000380799 NUTM1Q86Y26 1132 aa9.51□□□□□ -0.89
SNAPC3-201ENST00000380799 TRIM32Q13049 653 aa9.5□□□□□ -0.89
SNAPC3-201ENST00000380799 CRIPAKQ8N1N5 446 aa9.5□□□□□ -0.89
SNAPC3-201ENST00000380799 WNT7AO00755 349 aa9.49□□□□□ -0.89
SNAPC3-201ENST00000380799 BCANQ96GW7 911 aa9.49□□□□□ -0.89
SNAPC3-201ENST00000380799 AAASQ9NRG9 546 aa9.49□□□□□ -0.89
SNAPC3-201ENST00000380799 TTC24A2A3L6 582 aaPredicted RBP9.48□□□□□ -0.89
SNAPC3-201ENST00000380799 AVPP01185 164 aa9.48□□□□□ -0.89
SNAPC3-201ENST00000380799 CTC1Q2NKJ3 1217 aa9.48□□□□□ -0.89
SNAPC3-201ENST00000380799 HLA-CQ95604 372 aa9.47□□□□□ -0.89
SNAPC3-201ENST00000380799 REPIN1Q9BWE0 567 aaKnown RBP9.47□□□□□ -0.89
SNAPC3-201ENST00000380799 ST8SIA5O15466 376 aa9.46□□□□□ -0.9
SNAPC3-201ENST00000380799 CCDC24Q8N4L8 307 aa9.46□□□□□ -0.9
SNAPC3-201ENST00000380799 ZNF775Q96BV0 537 aaPredicted RBP9.46□□□□□ -0.9
SNAPC3-201ENST00000380799 JUNDP17535 347 aa9.45□□□□□ -0.9
SNAPC3-201ENST00000380799 BARGINQ6ZT62 677 aa9.45□□□□□ -0.9
SNAPC3-201ENST00000380799 RETREG3Q86VR2 466 aa9.45□□□□□ -0.9
SNAPC3-201ENST00000380799 SNIP1Q8TAD8 396 aaKnown RBP9.45□□□□□ -0.9
SNAPC3-201ENST00000380799 AXIN1O15169 862 aa9.44□□□□□ -0.9
SNAPC3-201ENST00000380799 TTLL12Q14166 644 aaPredicted RBP9.44□□□□□ -0.9
SNAPC3-201ENST00000380799 ZMYND10O75800 440 aa9.43□□□□□ -0.9
SNAPC3-201ENST00000380799 FDX1P10109 184 aa9.43□□□□□ -0.9
SNAPC3-201ENST00000380799 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
SNAPC3-201ENST00000380799 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
SNAPC3-201ENST00000380799 WNT7BP56706 349 aa9.43□□□□□ -0.9
SNAPC3-201ENST00000380799 GUCA2AQ02747 115 aa9.43□□□□□ -0.9
SNAPC3-201ENST00000380799 MRGPRX2Q96LB1 330 aa9.42□□□□□ -0.9
SNAPC3-201ENST00000380799 POTECB2RU33 542 aa9.41□□□□□ -0.9
SNAPC3-201ENST00000380799 AMHR2Q16671 573 aa9.41□□□□□ -0.9
SNAPC3-201ENST00000380799 C6orf229H3BNL8 230 aa9.4□□□□□ -0.9
SNAPC3-201ENST00000380799 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
SNAPC3-201ENST00000380799 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
SNAPC3-201ENST00000380799 SYMPKQ92797 1274 aaKnown RBP9.39□□□□□ -0.91
SNAPC3-201ENST00000380799 NUDT12Q9BQG2 462 aa9.39□□□□□ -0.91
SNAPC3-201ENST00000380799 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
SNAPC3-201ENST00000380799 SMPD1P17405 629 aa9.38□□□□□ -0.91
SNAPC3-201ENST00000380799 DIXDC1Q155Q3 683 aa9.38□□□□□ -0.91
SNAPC3-201ENST00000380799 RC3H1Q5TC82 1133 aaKnown RBP9.38□□□□□ -0.91
SNAPC3-201ENST00000380799 SPDYE5A6NIY4 337 aa9.37□□□□□ -0.91
SNAPC3-201ENST00000380799 MS4A1P11836 297 aa9.37□□□□□ -0.91
SNAPC3-201ENST00000380799 PCDHGC3Q9UN70 934 aa9.37□□□□□ -0.91
SNAPC3-201ENST00000380799 CCNYL3P0C7X3 344 aa9.36□□□□□ -0.91
SNAPC3-201ENST00000380799 GIGYF2Q6Y7W6 1299 aaKnown RBP9.36□□□□□ -0.91
SNAPC3-201ENST00000380799 C11orf95C9JLR9 678 aaPredicted RBP9.35□□□□□ -0.91
SNAPC3-201ENST00000380799 GJA5P36382 358 aa9.35□□□□□ -0.91
SNAPC3-201ENST00000380799 SKOR1P84550 965 aa9.35□□□□□ -0.91
SNAPC3-201ENST00000380799 J3QL48 77 aa9.34□□□□□ -0.91
SNAPC3-201ENST00000380799 PTPRNQ16849 979 aa9.34□□□□□ -0.91
SNAPC3-201ENST00000380799 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
SNAPC3-201ENST00000380799 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
SNAPC3-201ENST00000380799 MOXD2PA6NHM9 499 aa9.33□□□□□ -0.92
SNAPC3-201ENST00000380799 MTMR2Q13614 643 aa9.33□□□□□ -0.92
SNAPC3-201ENST00000380799 EHBP1Q8NDI1 1231 aa9.33□□□□□ -0.92
SNAPC3-201ENST00000380799 GMPR2Q9P2T1 348 aaKnown RBP9.33□□□□□ -0.92
SNAPC3-201ENST00000380799 NDUFV2P19404 249 aa9.32□□□□□ -0.92
SNAPC3-201ENST00000380799 DESI1Q6ICB0 168 aa9.32□□□□□ -0.92
SNAPC3-201ENST00000380799 SENP2Q9HC62 589 aa9.32□□□□□ -0.92
SNAPC3-201ENST00000380799 PTCRAQ6ISU1 281 aaPredicted RBP9.31□□□□□ -0.92
SNAPC3-201ENST00000380799 PRR7Q8TB68 274 aa9.31□□□□□ -0.92
SNAPC3-201ENST00000380799 ATP13A2Q9NQ11 1180 aa9.31□□□□□ -0.92
SNAPC3-201ENST00000380799 ALDH1A1P00352 501 aa9.3□□□□□ -0.92
SNAPC3-201ENST00000380799 TREML4Q6UXN2 200 aa9.3□□□□□ -0.92
SNAPC3-201ENST00000380799 HPS1Q92902 700 aa9.3□□□□□ -0.92
SNAPC3-201ENST00000380799 AK7Q96M32 723 aa9.3□□□□□ -0.92
SNAPC3-201ENST00000380799 EVA1BQ9NVM1 165 aa9.3□□□□□ -0.92
SNAPC3-201ENST00000380799 TRIM66O15016 1216 aa9.29□□□□□ -0.92
SNAPC3-201ENST00000380799 PARP9Q8IXQ6 854 aa9.29□□□□□ -0.92
SNAPC3-201ENST00000380799 TBC1D2Q9BYX2 928 aa9.29□□□□□ -0.92
SNAPC3-201ENST00000380799 KCNH2Q12809 1159 aa9.28□□□□□ -0.92
SNAPC3-201ENST00000380799 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
SNAPC3-201ENST00000380799 UNC93B1Q9H1C4 597 aa9.28□□□□□ -0.92
SNAPC3-201ENST00000380799 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
SNAPC3-201ENST00000380799 SIAH2O43255 324 aa9.27□□□□□ -0.93
SNAPC3-201ENST00000380799 SH3BP2P78314 561 aa9.27□□□□□ -0.93
SNAPC3-201ENST00000380799 RSBN1LQ6PCB5 846 aaPredicted RBP9.27□□□□□ -0.93
SNAPC3-201ENST00000380799 TRIM47Q96LD4 638 aa9.26□□□□□ -0.93
SNAPC3-201ENST00000380799 SPTLC1O15269 473 aa9.25□□□□□ -0.93
SNAPC3-201ENST00000380799 ZBTB3Q9H5J0 574 aa9.25□□□□□ -0.93
SNAPC3-201ENST00000380799 PLEKHG3A1L390 1219 aa9.24□□□□□ -0.93
SNAPC3-201ENST00000380799 WFS1O76024 890 aa9.24□□□□□ -0.93
SNAPC3-201ENST00000380799 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
SNAPC3-201ENST00000380799 PRPF38BQ5VTL8 546 aaKnown RBP9.24□□□□□ -0.93
SNAPC3-201ENST00000380799 VARSP26640 1264 aaKnown RBP9.23□□□□□ -0.93
SNAPC3-201ENST00000380799 LYPD8Q6UX82 237 aa9.23□□□□□ -0.93
SNAPC3-201ENST00000380799 ZNF511Q8NB15 262 aa9.23□□□□□ -0.93
SNAPC3-201ENST00000380799 BAP1Q92560 729 aa9.23□□□□□ -0.93
SNAPC3-201ENST00000380799 CTHP32929 405 aa9.22□□□□□ -0.93
SNAPC3-201ENST00000380799 LINC01559Q495D7 138 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms