RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 FEZ1Q99689 392 aa5.73□□□□□ -1.49
PTCD2-202ENST00000380639 CIZ1Q9ULV3 898 aaPredicted RBP5.73□□□□□ -1.49
PTCD2-202ENST00000380639 FRMD3A2A2Y4 597 aa5.73□□□□□ -1.49
PTCD2-202ENST00000380639 RAB3IL1Q8TBN0 382 aa5.73□□□□□ -1.49
PTCD2-202ENST00000380639 RABGAP1Q9Y3P9 1069 aa5.73□□□□□ -1.49
PTCD2-202ENST00000380639 MATR3P43243 847 aaKnown RBP eCLIP5.73□□□□□ -1.49
PTCD2-202ENST00000380639 PMFBP1Q8TBY8 1022 aa5.73□□□□□ -1.49
PTCD2-202ENST00000380639 USP6NLQ92738 828 aa5.73□□□□□ -1.49
PTCD2-202ENST00000380639 BLVRAP53004 296 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 RBM10P98175 930 aaKnown RBP5.72□□□□□ -1.49
PTCD2-202ENST00000380639 GOLGA2Q08379 1002 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 TMCO4Q5TGY1 634 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 APLFQ8IW19 511 aaPredicted RBP5.72□□□□□ -1.49
PTCD2-202ENST00000380639 PCMTD1Q96MG8 357 aaPredicted RBP5.72□□□□□ -1.49
PTCD2-202ENST00000380639 UBE4AQ14139 1066 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 CCDC39Q9UFE4 941 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 FBXO2Q9UK22 296 aaPredicted RBP5.72□□□□□ -1.49
PTCD2-202ENST00000380639 DCAF8L1A6NGE4 600 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 FAM43AQ8N2R8 423 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 MAP9Q49MG5 647 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 CCDC50Q8IVM0 306 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 PLCB4Q15147 1175 aa5.72□□□□□ -1.49
PTCD2-202ENST00000380639 ZNF853P0CG23 659 aa5.71□□□□□ -1.49
PTCD2-202ENST00000380639 NOP2P46087 812 aaKnown RBP5.71□□□□□ -1.49
PTCD2-202ENST00000380639 SF3A1Q15459 793 aaKnown RBP5.71□□□□□ -1.49
PTCD2-202ENST00000380639 GBP7Q8N8V2 638 aaPredicted RBP5.71□□□□□ -1.49
PTCD2-202ENST00000380639 IWS1Q96ST2 819 aa5.71□□□□□ -1.49
PTCD2-202ENST00000380639 ATICP31939 592 aa5.71□□□□□ -1.49
PTCD2-202ENST00000380639 TAX1BP1Q86VP1 789 aa5.71□□□□□ -1.49
PTCD2-202ENST00000380639 ZFYP08048 801 aaPredicted RBP5.71□□□□□ -1.49
PTCD2-202ENST00000380639 RGS3P49796 1198 aa5.71□□□□□ -1.49
PTCD2-202ENST00000380639 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.71□□□□□ -1.5
PTCD2-202ENST00000380639 PPFIA3O75145 1194 aa5.71□□□□□ -1.5
PTCD2-202ENST00000380639 CALCOCO1Q9P1Z2 691 aa5.71□□□□□ -1.5
PTCD2-202ENST00000380639 R3HCC1Q9Y3T6 440 aaKnown RBP5.71□□□□□ -1.5
PTCD2-202ENST00000380639 LRRC23Q53EV4 343 aaPredicted RBP5.71□□□□□ -1.5
PTCD2-202ENST00000380639 RPUSD2Q8IZ73 545 aaKnown RBP5.71□□□□□ -1.5
PTCD2-202ENST00000380639 ERLIN2O94905 339 aa5.71□□□□□ -1.5
PTCD2-202ENST00000380639 MNAT1P51948 309 aa5.71□□□□□ -1.5
PTCD2-202ENST00000380639 TRERF1Q96PN7 1200 aa5.71□□□□□ -1.5
PTCD2-202ENST00000380639 GRIPAP1Q4V328 841 aa5.71□□□□□ -1.5
PTCD2-202ENST00000380639 HSPA5P11021 654 aaKnown RBP5.71□□□□□ -1.5
PTCD2-202ENST00000380639 GORABQ5T7V8 394 aa5.71□□□□□ -1.5
PTCD2-202ENST00000380639 TMF1P82094 1093 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 CCDC148Q8NFR7 591 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 STMN2Q93045 179 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 CTAGE1Q96RT6 745 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 PRR16Q569H4 304 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 GJC2Q5T442 439 aaPredicted RBP5.7□□□□□ -1.5
PTCD2-202ENST00000380639 NAA16Q6N069 864 aaPredicted RBP5.7□□□□□ -1.5
PTCD2-202ENST00000380639 A0A1B0GUL7 405 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 H3BQV1 296 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 NCAPGQ9BPX3 1015 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 CNPY4Q8N129 248 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 CEP83Q9Y592 693 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 NUCB1Q02818 461 aa5.7□□□□□ -1.5
PTCD2-202ENST00000380639 SPOUT1Q5T280 376 aaKnown RBP5.7□□□□□ -1.5
PTCD2-202ENST00000380639 BICDL2A1A5D9 508 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 GFAPP14136 432 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 STMN1P16949 149 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 VPS41P49754 854 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 FLOT2Q14254 428 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 RPGRQ92834 1020 aaKnown RBP5.69□□□□□ -1.5
PTCD2-202ENST00000380639 MAFGO15525 162 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 KIF5AQ12840 1032 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 MCM6Q14566 821 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 FMNL3Q8IVF7 1028 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 ATP6V1E1P36543 226 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 SKOR1P84550 965 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 AIMP1Q12904 312 aaKnown RBP5.69□□□□□ -1.5
PTCD2-202ENST00000380639 TSPYL2Q9H2G4 693 aaPredicted RBP5.69□□□□□ -1.5
PTCD2-202ENST00000380639 MAP2K1Q02750 393 aaPredicted RBP5.69□□□□□ -1.5
PTCD2-202ENST00000380639 DIXDC1Q155Q3 683 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 FILIP1LQ4L180 1135 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 LRCH2Q5VUJ6 765 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 EPB41L2O43491 1005 aaKnown RBP5.69□□□□□ -1.5
PTCD2-202ENST00000380639 CEBPZQ03701 1054 aaKnown RBP5.69□□□□□ -1.5
PTCD2-202ENST00000380639 SETDB1Q15047 1291 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 DPF3Q92784 378 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 PPP1R9BQ96SB3 815 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 DIAPH1O60610 1272 aaKnown RBP5.69□□□□□ -1.5
PTCD2-202ENST00000380639 HIP1RO75146 1068 aa5.69□□□□□ -1.5
PTCD2-202ENST00000380639 CHMP4BQ9H444 224 aaKnown RBP5.69□□□□□ -1.5
PTCD2-202ENST00000380639 DNAAF4Q8WXU2 420 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 VCXQ9H320 206 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 SERPINA10Q9UK55 444 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 PAIP2BQ9ULR5 123 aaKnown RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 ANKRD18BA2A2Z9 1011 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 DYTNA2CJ06 578 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 ZFYVE27Q5T4F4 411 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 RNF187Q5TA31 235 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 ARMCX6Q7L4S7 300 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 GRM1Q13255 1194 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 CEP57Q86XR8 500 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 MRFAP1L1Q96HT8 127 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 CSB-PGBD3P0DP91 1061 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 CCDC112Q8NEF3 446 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 ANKRD20A12PQ8NF67 263 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 FAM107BQ9H098 131 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms