RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 PDCP20941 246 aa12.55□□□□□ -0.4
CCDC85C-201ENST00000380243 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
CCDC85C-201ENST00000380243 CCDC7Q96M83 1385 aa12.54□□□□□ -0.4
CCDC85C-201ENST00000380243 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
CCDC85C-201ENST00000380243 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
CCDC85C-201ENST00000380243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.54□□□□□ -0.4
CCDC85C-201ENST00000380243 NUP155O75694 1391 aa12.54□□□□□ -0.4
CCDC85C-201ENST00000380243 MARCH6O60337 910 aa12.54□□□□□ -0.4
CCDC85C-201ENST00000380243 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
CCDC85C-201ENST00000380243 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
CCDC85C-201ENST00000380243 KANK1Q14678 1352 aa12.54□□□□□ -0.4
CCDC85C-201ENST00000380243 SOX12O15370 315 aa12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 NBPF1Q3BBV0 1214 aa12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 PDZRN3Q9UPQ7 1066 aa12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 K7ELQ4 463 aaPredicted RBP12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 KIF18AQ8NI77 898 aa12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.43e-8■□□□□ 9.7
CCDC85C-201ENST00000380243 RB1CC1Q8TDY2 1594 aa12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 CCDC94Q9BW85 323 aaPredicted RBP12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 FIBPO43427 364 aa12.53□□□□□ -0.4
CCDC85C-201ENST00000380243 STK26Q9P289 416 aa12.52□□□□□ -0.4
CCDC85C-201ENST00000380243 NEK4P51957 841 aa12.52□□□□□ -0.4
CCDC85C-201ENST00000380243 MYO6Q9UM54 1294 aa12.52□□□□□ -0.41
CCDC85C-201ENST00000380243 TNMDQ9H2S6 317 aa12.52□□□□□ -0.41
CCDC85C-201ENST00000380243 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
CCDC85C-201ENST00000380243 TRIM29Q14134 588 aa12.52□□□□□ -0.41
CCDC85C-201ENST00000380243 CENPHQ9H3R5 247 aa12.52□□□□□ -0.41
CCDC85C-201ENST00000380243 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 KRT222Q8N1A0 295 aa12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 SAFB2Q14151 953 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 SYCE3A1L190 88 aa12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 WDR33Q9C0J8 1336 aaKnown RBP12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 SPAG9O60271 1321 aaKnown RBP12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 CCDC27Q2M243 656 aa12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 TTLL5Q6EMB2 1281 aa12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 CARMIL1Q5VZK9 1371 aa12.51□□□□□ -0.41
CCDC85C-201ENST00000380243 CPLX2Q6PUV4 134 aaKnown RBP12.5□□□□□ -0.41
CCDC85C-201ENST00000380243 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
CCDC85C-201ENST00000380243 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
CCDC85C-201ENST00000380243 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
CCDC85C-201ENST00000380243 AKNAQ7Z591 1439 aa12.49□□□□□ -0.41
CCDC85C-201ENST00000380243 CCDC102AQ96A19 550 aa12.49□□□□□ -0.41
CCDC85C-201ENST00000380243 IQCEQ6IPM2 695 aa12.49□□□□□ -0.41
CCDC85C-201ENST00000380243 ELL2O00472 640 aaPredicted RBP12.49□□□□□ -0.41
CCDC85C-201ENST00000380243 XRCC6P12956 609 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC85C-201ENST00000380243 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
CCDC85C-201ENST00000380243 ANKRD30AQ9BXX3 1397 aa12.49□□□□□ -0.41
CCDC85C-201ENST00000380243 TXLNBQ8N3L3 684 aa12.49□□□□□ -0.41
CCDC85C-201ENST00000380243 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
CCDC85C-201ENST00000380243 ZNF396Q96N95 335 aaPredicted RBP12.48□□□□□ -0.41
CCDC85C-201ENST00000380243 PPFIBP1Q86W92 1011 aa12.48□□□□□ -0.41
CCDC85C-201ENST00000380243 ADAMTS8Q9UP79 889 aa12.48□□□□□ -0.41
CCDC85C-201ENST00000380243 SMARCE1Q969G3 411 aa12.48□□□□□ -0.41
CCDC85C-201ENST00000380243 WASHC2AQ641Q2 1341 aa12.48□□□□□ -0.41
CCDC85C-201ENST00000380243 PSMA5P28066 241 aa12.48□□□□□ -0.41
CCDC85C-201ENST00000380243 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
CCDC85C-201ENST00000380243 FAM193AP78312 1265 aa12.47□□□□□ -0.41
CCDC85C-201ENST00000380243 PTPN14Q15678 1187 aa12.47□□□□□ -0.41
CCDC85C-201ENST00000380243 CCDC47Q96A33 483 aaKnown RBP12.47□□□□□ -0.41
CCDC85C-201ENST00000380243 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
CCDC85C-201ENST00000380243 TOMM22Q9NS69 142 aa12.47□□□□□ -0.41
CCDC85C-201ENST00000380243 FILIP1Q7Z7B0 1213 aa12.47□□□□□ -0.41
CCDC85C-201ENST00000380243 FOSBP53539 338 aa12.46□□□□□ -0.41
CCDC85C-201ENST00000380243 ODF2Q5BJF6 829 aa12.46□□□□□ -0.41
CCDC85C-201ENST00000380243 OFD1O75665 1012 aa12.46□□□□□ -0.41
CCDC85C-201ENST00000380243 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
CCDC85C-201ENST00000380243 CBFA2T2O43439 604 aa12.46□□□□□ -0.41
CCDC85C-201ENST00000380243 SAFBQ15424 915 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCDC85C-201ENST00000380243 LRRFIP1Q32MZ4 808 aaKnown RBP12.46□□□□□ -0.41
CCDC85C-201ENST00000380243 ERLIN2O94905 339 aa12.46□□□□□ -0.42
CCDC85C-201ENST00000380243 RSPH4AQ5TD94 716 aa12.46□□□□□ -0.42
CCDC85C-201ENST00000380243 MNAT1P51948 309 aa12.46□□□□□ -0.42
CCDC85C-201ENST00000380243 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
CCDC85C-201ENST00000380243 ERC2O15083 957 aa12.45□□□□□ -0.42
CCDC85C-201ENST00000380243 ROCK1Q13464 1354 aa12.45□□□□□ -0.42
CCDC85C-201ENST00000380243 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
CCDC85C-201ENST00000380243 HDGFP51858 240 aaKnown RBP12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 CCDC9Q9Y3X0 531 aaKnown RBP12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 SFPQP23246 707 aaKnown RBP eCLIP12.44□□□□□ -0.425e-6■■□□□ 12.5
CCDC85C-201ENST00000380243 CCDC183Q5T5S1 534 aa12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 TNPO1Q92973 898 aaKnown RBP12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 PAXBP1Q9Y5B6 917 aa12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 HS1BP3Q53T59 392 aa12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 MICALCLQ6ZW33 695 aa12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 FMNL2Q96PY5 1086 aa12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 NINLQ9Y2I6 1382 aa12.44□□□□□ -0.42
CCDC85C-201ENST00000380243 ZNHIT6Q9NWK9 470 aaKnown RBP12.43□□□□□ -0.42
CCDC85C-201ENST00000380243 BMS1Q14692 1282 aaKnown RBP12.43□□□□□ -0.42
CCDC85C-201ENST00000380243 SERPINC1P01008 464 aa12.43□□□□□ -0.42
CCDC85C-201ENST00000380243 TBC1D2Q9BYX2 928 aa12.43□□□□□ -0.42
CCDC85C-201ENST00000380243 NEFHP12036 1026 aa12.43□□□□□ -0.42
CCDC85C-201ENST00000380243 NEMFO60524 1076 aa12.43□□□□□ -0.42
CCDC85C-201ENST00000380243 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
CCDC85C-201ENST00000380243 GBP3Q9H0R5 595 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms