RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 MST1RQ04912 1400 aa6.88□□□□□ -1.31
C9orf72-203ENST00000380003 NGLY1Q96IV0 654 aa6.88□□□□□ -1.31
C9orf72-203ENST00000380003 PRAM1Q96QH2 718 aa6.88□□□□□ -1.31
C9orf72-203ENST00000380003 KIF1BO60333 1816 aa6.87□□□□□ -1.31
C9orf72-203ENST00000380003 AFF2P51816 1311 aa6.87□□□□□ -1.31
C9orf72-203ENST00000380003 SETD1AO15047 1707 aaKnown RBP6.87□□□□□ -1.31
C9orf72-203ENST00000380003 SETBP1Q9Y6X0 1596 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 COL16A1Q07092 1604 aaPredicted RBP6.86□□□□□ -1.31
C9orf72-203ENST00000380003 LRRC59Q96AG4 307 aaKnown RBP6.86□□□□□ -1.31
C9orf72-203ENST00000380003 MINK1Q8N4C8 1332 aaPredicted RBP6.86□□□□□ -1.31
C9orf72-203ENST00000380003 PIK3R4Q99570 1358 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 SPATA31E1Q6ZUB1 1445 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 ASXL1Q8IXJ9 1541 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 NALCNQ8IZF0 1738 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 NEUROD1Q13562 356 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 ADGRL3Q9HAR2 1447 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 C1orf167Q5SNV9 1468 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 SIN3AQ96ST3 1273 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 QTRT2Q9H974 415 aaKnown RBP6.86□□□□□ -1.31
C9orf72-203ENST00000380003 XRN1Q8IZH2 1706 aaKnown RBP6.85□□□□□ -1.31
C9orf72-203ENST00000380003 NUTM2GQ5VZR2 741 aa6.85□□□□□ -1.31
C9orf72-203ENST00000380003 POGKQ9P215 609 aa6.85□□□□□ -1.31
C9orf72-203ENST00000380003 RPGRIP1LQ68CZ1 1315 aa6.84□□□□□ -1.31
C9orf72-203ENST00000380003 RXRBP28702 533 aa6.84□□□□□ -1.31
C9orf72-203ENST00000380003 NBPF1Q3BBV0 1214 aa6.84□□□□□ -1.31
C9orf72-203ENST00000380003 DIP2AQ14689 1571 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 C14orf93Q9H972 538 aaKnown RBP6.83□□□□□ -1.32
C9orf72-203ENST00000380003 USP21Q9UK80 565 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 PNPLA6Q8IY17 1366 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 SPATA31A6Q5VVP1 1343 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 PAK3O75914 559 aaPredicted RBP6.83□□□□□ -1.32
C9orf72-203ENST00000380003 YTHDC2Q9H6S0 1430 aaKnown RBP6.83□□□□□ -1.32
C9orf72-203ENST00000380003 PPLO60437 1756 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 HAP1P54257 671 aaPredicted RBP6.82□□□□□ -1.32
C9orf72-203ENST00000380003 FAM182BQ5T319 152 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 PIK3C2GO75747 1445 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 ANKRD30BQ9BXX2 1392 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 ZNF772Q68DY9 489 aaPredicted RBP6.82□□□□□ -1.32
C9orf72-203ENST00000380003 SOS2Q07890 1332 aaPredicted RBP6.82□□□□□ -1.32
C9orf72-203ENST00000380003 PSME1Q06323 249 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 KRT28Q7Z3Y7 464 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 NCOA3Q9Y6Q9 1424 aa6.81□□□□□ -1.32
C9orf72-203ENST00000380003 CCDC9Q9Y3X0 531 aaKnown RBP6.81□□□□□ -1.32
C9orf72-203ENST00000380003 PTCH1Q13635 1447 aa6.81□□□□□ -1.32
C9orf72-203ENST00000380003 LRPPRCP42704 1394 aaKnown RBP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 UPF1Q92900 1129 aaKnown RBP eCLIP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 A0A0G2JS52 829 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 MYT1Q01538 1121 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 PHF8Q9UPP1 1060 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 DCCP43146 1447 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 NPHP3Q7Z494 1330 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 PRR36Q9H6K5 1346 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 DHX57Q6P158 1386 aaKnown RBP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 AHDC1Q5TGY3 1603 aaPredicted RBP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 USP35Q9P2H5 1018 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 RGPD8O14715 1765 aaPredicted RBP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 ABCC11Q96J66 1382 aa6.79□□□□□ -1.32
C9orf72-203ENST00000380003 ZBTB7CA1YPR0 619 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 SOX12O15370 315 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 CHRNA2Q15822 529 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 L3MBTL2Q969R5 705 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 NGDNQ8NEJ9 315 aaKnown RBP6.78□□□□□ -1.32
C9orf72-203ENST00000380003 CABP2Q9NPB3 220 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 RGS12O14924 1447 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 FAM83GA6ND36 823 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 ZC3H6P61129 1189 aaKnown RBP6.77□□□□□ -1.33
C9orf72-203ENST00000380003 RBM6P78332 1123 aaKnown RBP6.77□□□□□ -1.33
C9orf72-203ENST00000380003 SPATA31A3Q5VYP0 1347 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 NHSL1Q5SYE7 1610 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 PXDNQ92626 1479 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 CDK19Q9BWU1 502 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 WASLO00401 505 aaPredicted RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 SRPK2P78362 688 aaKnown RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 RNF216Q9NWF9 866 aaPredicted RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 BCL9LQ86UU0 1499 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 SHPRHQ149N8 1683 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 IFT172Q9UG01 1749 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 DEFB132Q7Z7B7 95 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 FNBP4Q8N3X1 1017 aaPredicted RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 NUDT16Q96DE0 195 aaKnown RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 STRN4Q9NRL3 753 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 BTG4Q9NY30 223 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 TRPC5Q9UL62 973 aaPredicted RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 FAM98CQ17RN3 349 aaKnown RBP6.75□□□□□ -1.33
C9orf72-203ENST00000380003 GJD4Q96KN9 370 aaPredicted RBP6.75□□□□□ -1.33
C9orf72-203ENST00000380003 TECPR2O15040 1411 aa6.75□□□□□ -1.33
C9orf72-203ENST00000380003 ADGRB1O14514 1584 aa6.74□□□□□ -1.33
C9orf72-203ENST00000380003 CDC42BPGQ6DT37 1551 aa6.74□□□□□ -1.33
C9orf72-203ENST00000380003 UNC5CLQ8IV45 518 aa6.74□□□□□ -1.33
C9orf72-203ENST00000380003 NRXN1Q9ULB1 1477 aa6.74□□□□□ -1.33
C9orf72-203ENST00000380003 ACIN1Q9UKV3 1341 aaKnown RBP6.73□□□□□ -1.33
C9orf72-203ENST00000380003 NBPF8Q3BBV2 869 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 MYOM2P54296 1465 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 ACEP12821 1306 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 POTEHQ6S545 545 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 ABTB2Q8N961 1025 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 CABP1Q9NZU7 370 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 CNKSR2Q8WXI2 1034 aa6.72□□□□□ -1.33
C9orf72-203ENST00000380003 PRDM11Q9NQV5 511 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms