RNA–Protein interactions for RNA: ENST00000379698.8

SH3KBP1-202, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH3KBP1, Length 2,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-202ENST00000379698 GSE1Q14687 1217 aa16.81■□□□□ 0.28
SH3KBP1-202ENST00000379698 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
SH3KBP1-202ENST00000379698 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
SH3KBP1-202ENST00000379698 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
SH3KBP1-202ENST00000379698 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
SH3KBP1-202ENST00000379698 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
SH3KBP1-202ENST00000379698 RPGRIP1LQ68CZ1 1315 aa16.8■□□□□ 0.28
SH3KBP1-202ENST00000379698 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
SH3KBP1-202ENST00000379698 ADGRB1O14514 1584 aa16.79■□□□□ 0.28
SH3KBP1-202ENST00000379698 TRAK1Q9UPV9 953 aa16.79■□□□□ 0.28
SH3KBP1-202ENST00000379698 COG6Q9Y2V7 657 aa16.79■□□□□ 0.28
SH3KBP1-202ENST00000379698 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
SH3KBP1-202ENST00000379698 PPLO60437 1756 aa16.79■□□□□ 0.28
SH3KBP1-202ENST00000379698 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
SH3KBP1-202ENST00000379698 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
SH3KBP1-202ENST00000379698 CCDC27Q2M243 656 aa16.78■□□□□ 0.28
SH3KBP1-202ENST00000379698 PANK1Q8TE04 598 aa16.78■□□□□ 0.28
SH3KBP1-202ENST00000379698 CFAP53Q96M91 514 aa16.78■□□□□ 0.28
SH3KBP1-202ENST00000379698 RARSP54136 660 aaKnown RBP16.78■□□□□ 0.28
SH3KBP1-202ENST00000379698 TCP11L2Q8N4U5 519 aa16.78■□□□□ 0.28
SH3KBP1-202ENST00000379698 PMFBP1Q8TBY8 1022 aa16.78■□□□□ 0.28
SH3KBP1-202ENST00000379698 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
SH3KBP1-202ENST00000379698 NPATQ14207 1427 aa16.77■□□□□ 0.27
SH3KBP1-202ENST00000379698 ZMYM3Q14202 1370 aa16.77■□□□□ 0.27
SH3KBP1-202ENST00000379698 NSD2O96028 1365 aa16.76■□□□□ 0.27
SH3KBP1-202ENST00000379698 FRAT1Q92837 279 aaPredicted RBP16.75■□□□□ 0.27
SH3KBP1-202ENST00000379698 NEUROD2Q15784 382 aa16.75■□□□□ 0.27
SH3KBP1-202ENST00000379698 USP19O94966 1318 aa16.75■□□□□ 0.27
SH3KBP1-202ENST00000379698 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
SH3KBP1-202ENST00000379698 MTHFSP49914 203 aa16.74■□□□□ 0.27
SH3KBP1-202ENST00000379698 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
SH3KBP1-202ENST00000379698 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
SH3KBP1-202ENST00000379698 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
SH3KBP1-202ENST00000379698 MYH16Q9H6N6 1097 aa16.73■□□□□ 0.27
SH3KBP1-202ENST00000379698 CFAP74Q9C0B2 1584 aa16.72■□□□□ 0.27
SH3KBP1-202ENST00000379698 BECN1Q14457 450 aa16.72■□□□□ 0.27
SH3KBP1-202ENST00000379698 ANKRD36BQ8N2N9 1353 aa16.72■□□□□ 0.27
SH3KBP1-202ENST00000379698 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
SH3KBP1-202ENST00000379698 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.27
SH3KBP1-202ENST00000379698 POGZQ7Z3K3 1410 aa16.71■□□□□ 0.27
SH3KBP1-202ENST00000379698 TMEM132EQ6IEE7 984 aa16.71■□□□□ 0.27
SH3KBP1-202ENST00000379698 FRMPD1Q5SYB0 1578 aa16.71■□□□□ 0.27
SH3KBP1-202ENST00000379698 GLI2P10070 1586 aa16.7■□□□□ 0.26
SH3KBP1-202ENST00000379698 GGT6Q6P531 493 aa16.69■□□□□ 0.26
SH3KBP1-202ENST00000379698 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
SH3KBP1-202ENST00000379698 FRAT2O75474 233 aaPredicted RBP16.69■□□□□ 0.26
SH3KBP1-202ENST00000379698 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
SH3KBP1-202ENST00000379698 PCDHB15Q9Y5E8 787 aa16.69■□□□□ 0.26
SH3KBP1-202ENST00000379698 ABCC3O15438 1527 aa16.69■□□□□ 0.26
SH3KBP1-202ENST00000379698 VGFO15240 615 aaPredicted RBP16.68■□□□□ 0.26
SH3KBP1-202ENST00000379698 UPF2Q9HAU5 1272 aaKnown RBP16.68■□□□□ 0.26
SH3KBP1-202ENST00000379698 RLBP1P12271 317 aa16.68■□□□□ 0.26
SH3KBP1-202ENST00000379698 ADGRB2O60241 1585 aa16.68■□□□□ 0.26
SH3KBP1-202ENST00000379698 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
SH3KBP1-202ENST00000379698 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
SH3KBP1-202ENST00000379698 SEC24BO95487 1268 aa16.67■□□□□ 0.26
SH3KBP1-202ENST00000379698 ARHGEF28Q8N1W1 1705 aaKnown RBP16.66■□□□□ 0.26
SH3KBP1-202ENST00000379698 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
SH3KBP1-202ENST00000379698 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
SH3KBP1-202ENST00000379698 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
SH3KBP1-202ENST00000379698 CD109Q6YHK3 1445 aa16.65■□□□□ 0.26
SH3KBP1-202ENST00000379698 CAMSAP1Q5T5Y3 1602 aa16.65■□□□□ 0.26
SH3KBP1-202ENST00000379698 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
SH3KBP1-202ENST00000379698 MVPQ14764 893 aaKnown RBP16.65■□□□□ 0.26
SH3KBP1-202ENST00000379698 ZKSCAN2Q63HK3 967 aa16.65■□□□□ 0.26
SH3KBP1-202ENST00000379698 PIK3C2BO00750 1634 aa16.65■□□□□ 0.26
SH3KBP1-202ENST00000379698 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.26
SH3KBP1-202ENST00000379698 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
SH3KBP1-202ENST00000379698 NEXMIFQ5QGS0 1516 aa16.64■□□□□ 0.25
SH3KBP1-202ENST00000379698 ABCC11Q96J66 1382 aa16.63■□□□□ 0.25
SH3KBP1-202ENST00000379698 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
SH3KBP1-202ENST00000379698 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
SH3KBP1-202ENST00000379698 DZIP1LQ8IYY4 767 aaKnown RBP16.62■□□□□ 0.25
SH3KBP1-202ENST00000379698 FTSJ3Q8IY81 847 aaKnown RBP16.62■□□□□ 0.25
SH3KBP1-202ENST00000379698 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
SH3KBP1-202ENST00000379698 BRPF3Q9ULD4 1205 aa16.61■□□□□ 0.25
SH3KBP1-202ENST00000379698 CABP2Q9NPB3 220 aa16.61■□□□□ 0.25
SH3KBP1-202ENST00000379698 ARHGAP31Q2M1Z3 1444 aa16.6■□□□□ 0.25
SH3KBP1-202ENST00000379698 SIGLEC1Q9BZZ2 1709 aa16.6■□□□□ 0.25
SH3KBP1-202ENST00000379698 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
SH3KBP1-202ENST00000379698 IL16Q14005 1332 aa16.59■□□□□ 0.25
SH3KBP1-202ENST00000379698 A0A1W2PP64 1363 aa16.59■□□□□ 0.25
SH3KBP1-202ENST00000379698 PLEKHF1Q96S99 279 aa16.59■□□□□ 0.25
SH3KBP1-202ENST00000379698 MED14O60244 1454 aa16.58■□□□□ 0.24
SH3KBP1-202ENST00000379698 TMPOP42166 694 aaKnown RBP16.58■□□□□ 0.24
SH3KBP1-202ENST00000379698 SMC4Q9NTJ3 1288 aa16.58■□□□□ 0.24
SH3KBP1-202ENST00000379698 ATAD2Q6PL18 1390 aa16.57■□□□□ 0.24
SH3KBP1-202ENST00000379698 HDAC1Q13547 482 aaPredicted RBP16.57■□□□□ 0.24
SH3KBP1-202ENST00000379698 DDX19BQ9UMR2 479 aa16.57■□□□□ 0.24
SH3KBP1-202ENST00000379698 COL3A1P02461 1466 aaPredicted RBP16.57■□□□□ 0.24
SH3KBP1-202ENST00000379698 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
SH3KBP1-202ENST00000379698 EXOSC9Q06265 439 aaKnown RBP16.56■□□□□ 0.24
SH3KBP1-202ENST00000379698 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
SH3KBP1-202ENST00000379698 TSR2Q969E8 191 aaKnown RBP16.56■□□□□ 0.24
SH3KBP1-202ENST00000379698 NEO1Q92859 1461 aa16.56■□□□□ 0.24
SH3KBP1-202ENST00000379698 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
SH3KBP1-202ENST00000379698 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
SH3KBP1-202ENST00000379698 SLKQ9H2G2 1235 aaPredicted RBP16.56■□□□□ 0.24
SH3KBP1-202ENST00000379698 SLC52A1Q9NWF4 448 aa16.56■□□□□ 0.24
SH3KBP1-202ENST00000379698 TERF2IPQ9NYB0 399 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms