RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 HDGFP51858 240 aaKnown RBP19.72■□□□□ 0.75
RAB3IP-203ENST00000378809 ADAMTS8Q9UP79 889 aa19.72■□□□□ 0.75
RAB3IP-203ENST00000378809 CEBPAP49715 358 aaPredicted RBP19.71■□□□□ 0.75
RAB3IP-203ENST00000378809 BLMP54132 1417 aaPredicted RBP19.71■□□□□ 0.75
RAB3IP-203ENST00000378809 MORC1Q86VD1 984 aa19.7■□□□□ 0.74
RAB3IP-203ENST00000378809 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
RAB3IP-203ENST00000378809 TNNT2P45379 298 aaPredicted RBP19.69■□□□□ 0.74
RAB3IP-203ENST00000378809 INSRP06213 1382 aa19.69■□□□□ 0.74
RAB3IP-203ENST00000378809 ANKRD36BQ8N2N9 1353 aa19.69■□□□□ 0.74
RAB3IP-203ENST00000378809 WAPLQ7Z5K2 1190 aa19.67■□□□□ 0.74
RAB3IP-203ENST00000378809 ATAD2Q6PL18 1390 aa19.66■□□□□ 0.74
RAB3IP-203ENST00000378809 TMEM2Q9UHN6 1383 aa19.66■□□□□ 0.74
RAB3IP-203ENST00000378809 NINLQ9Y2I6 1382 aa19.65■□□□□ 0.74
RAB3IP-203ENST00000378809 CDK19Q9BWU1 502 aa19.65■□□□□ 0.74
RAB3IP-203ENST00000378809 METP08581 1390 aa19.64■□□□□ 0.73
RAB3IP-203ENST00000378809 PDE3BQ13370 1112 aa19.63■□□□□ 0.73
RAB3IP-203ENST00000378809 A0A1W2PP64 1363 aa19.63■□□□□ 0.73
RAB3IP-203ENST00000378809 PLEKHH1Q9ULM0 1364 aa19.63■□□□□ 0.73
RAB3IP-203ENST00000378809 TERF2IPQ9NYB0 399 aa19.63■□□□□ 0.73
RAB3IP-203ENST00000378809 ABCC11Q96J66 1382 aa19.62■□□□□ 0.73
RAB3IP-203ENST00000378809 DLC1Q96QB1 1528 aa19.62■□□□□ 0.73
RAB3IP-203ENST00000378809 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
RAB3IP-203ENST00000378809 SETD1AO15047 1707 aaKnown RBP19.62■□□□□ 0.73
RAB3IP-203ENST00000378809 UBR1Q8IWV7 1749 aa19.62■□□□□ 0.73
RAB3IP-203ENST00000378809 NLRP1Q9C000 1473 aa19.62■□□□□ 0.73
RAB3IP-203ENST00000378809 TXNDC2Q86VQ3 553 aa19.61■□□□□ 0.73
RAB3IP-203ENST00000378809 ERICH6BQ5W0A0 696 aa19.6■□□□□ 0.73
RAB3IP-203ENST00000378809 CCDC146Q8IYE0 955 aa19.6■□□□□ 0.73
RAB3IP-203ENST00000378809 CDCA7LQ96GN5 454 aa19.6■□□□□ 0.73
RAB3IP-203ENST00000378809 USP32Q8NFA0 1604 aa19.6■□□□□ 0.73
RAB3IP-203ENST00000378809 NSD2O96028 1365 aa19.59■□□□□ 0.73
RAB3IP-203ENST00000378809 HDGFL2Q7Z4V5 671 aaPredicted RBP19.59■□□□□ 0.73
RAB3IP-203ENST00000378809 CABP1Q9NZU7 370 aa19.58■□□□□ 0.73
RAB3IP-203ENST00000378809 POLR3AO14802 1390 aaPredicted RBP19.58■□□□□ 0.72
RAB3IP-203ENST00000378809 FER1L4A9Z1Z3 1794 aa19.57■□□□□ 0.72
RAB3IP-203ENST00000378809 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
RAB3IP-203ENST00000378809 C3P01024 1663 aa19.56■□□□□ 0.72
RAB3IP-203ENST00000378809 LTKP29376 864 aa19.56■□□□□ 0.72
RAB3IP-203ENST00000378809 MTHFSP49914 203 aa19.55■□□□□ 0.72
RAB3IP-203ENST00000378809 GGNBP2Q9H3C7 697 aa19.55■□□□□ 0.72
RAB3IP-203ENST00000378809 PPP4R2Q9NY27 417 aa19.55■□□□□ 0.72
RAB3IP-203ENST00000378809 CFAP53Q96M91 514 aa19.54■□□□□ 0.72
RAB3IP-203ENST00000378809 RCAN3Q9UKA8 241 aa19.54■□□□□ 0.72
RAB3IP-203ENST00000378809 PLEKHG1Q9ULL1 1385 aa19.54■□□□□ 0.72
RAB3IP-203ENST00000378809 WASLO00401 505 aaPredicted RBP19.53■□□□□ 0.72
RAB3IP-203ENST00000378809 CD163L1Q9NR16 1453 aa19.53■□□□□ 0.72
RAB3IP-203ENST00000378809 RNF123Q5XPI4 1314 aa19.53■□□□□ 0.72
RAB3IP-203ENST00000378809 APAF1O14727 1248 aa19.52■□□□□ 0.72
RAB3IP-203ENST00000378809 SLC26A8Q96RN1 970 aa19.52■□□□□ 0.72
RAB3IP-203ENST00000378809 ADAMTS13Q76LX8 1427 aa19.51■□□□□ 0.71
RAB3IP-203ENST00000378809 FAM135BQ49AJ0 1406 aa19.51■□□□□ 0.71
RAB3IP-203ENST00000378809 TECPR2O15040 1411 aa19.5■□□□□ 0.71
RAB3IP-203ENST00000378809 FYB1O15117 783 aa19.5■□□□□ 0.71
RAB3IP-203ENST00000378809 THEMISQ8N1K5 641 aaPredicted RBP19.5■□□□□ 0.71
RAB3IP-203ENST00000378809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.49■□□□□ 0.71
RAB3IP-203ENST00000378809 SIRT1Q96EB6 747 aa19.49■□□□□ 0.71
RAB3IP-203ENST00000378809 ROBO2Q9HCK4 1378 aa19.48■□□□□ 0.71
RAB3IP-203ENST00000378809 RRP1P56182 461 aaKnown RBP19.48■□□□□ 0.71
RAB3IP-203ENST00000378809 GOLGA2Q08379 1002 aa19.48■□□□□ 0.71
RAB3IP-203ENST00000378809 CPS1P31327 1500 aa19.48■□□□□ 0.71
RAB3IP-203ENST00000378809 KNDC1Q76NI1 1749 aa19.48■□□□□ 0.71
RAB3IP-203ENST00000378809 B4GALNT3Q6L9W6 998 aa19.47■□□□□ 0.71
RAB3IP-203ENST00000378809 PPIP5K1Q6PFW1 1433 aa19.47■□□□□ 0.71
RAB3IP-203ENST00000378809 ATP7BP35670 1465 aa19.46■□□□□ 0.71
RAB3IP-203ENST00000378809 NUDT16Q96DE0 195 aaKnown RBP19.46■□□□□ 0.71
RAB3IP-203ENST00000378809 SLIT1O75093 1534 aa19.46■□□□□ 0.71
RAB3IP-203ENST00000378809 ZNF521Q96K83 1311 aa19.45■□□□□ 0.7
RAB3IP-203ENST00000378809 ARHGAP23Q9P227 1491 aa19.44■□□□□ 0.7
RAB3IP-203ENST00000378809 SHPRHQ149N8 1683 aa19.44■□□□□ 0.7
RAB3IP-203ENST00000378809 CCDC61Q9Y6R9 512 aa19.44■□□□□ 0.7
RAB3IP-203ENST00000378809 NCKAP5LQ9HCH0 1330 aa19.44■□□□□ 0.7
RAB3IP-203ENST00000378809 U2AF1L5P0DN76 240 aaPredicted RBP19.43■□□□□ 0.7
RAB3IP-203ENST00000378809 U2AF1Q01081 240 aaKnown RBP eCLIP19.43■□□□□ 0.7
RAB3IP-203ENST00000378809 RUNDC1Q96C34 613 aa19.43■□□□□ 0.7
RAB3IP-203ENST00000378809 MED14O60244 1454 aa19.43■□□□□ 0.7
RAB3IP-203ENST00000378809 DUSP27Q5VZP5 1158 aa19.42■□□□□ 0.7
RAB3IP-203ENST00000378809 NEUROD2Q15784 382 aa19.42■□□□□ 0.7
RAB3IP-203ENST00000378809 NGEFQ8N5V2 710 aa19.41■□□□□ 0.7
RAB3IP-203ENST00000378809 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
RAB3IP-203ENST00000378809 AMOTL2Q9Y2J4 779 aa19.41■□□□□ 0.7
RAB3IP-203ENST00000378809 PTPRUQ92729 1446 aa19.4■□□□□ 0.7
RAB3IP-203ENST00000378809 RIMS1Q86UR5 1692 aaKnown RBP19.4■□□□□ 0.7
RAB3IP-203ENST00000378809 NUTM2FA1L443 756 aa19.4■□□□□ 0.7
RAB3IP-203ENST00000378809 U2SURPO15042 1029 aaKnown RBP19.4■□□□□ 0.7
RAB3IP-203ENST00000378809 SLFN5Q08AF3 891 aa19.4■□□□□ 0.7
RAB3IP-203ENST00000378809 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
RAB3IP-203ENST00000378809 TBX22Q9Y458 520 aa19.4■□□□□ 0.7
RAB3IP-203ENST00000378809 DNAJC5Q9H3Z4 198 aa19.39■□□□□ 0.69
RAB3IP-203ENST00000378809 CPSF1Q10570 1443 aaKnown RBP19.39■□□□□ 0.69
RAB3IP-203ENST00000378809 EDC4Q6P2E9 1401 aaKnown RBP19.39■□□□□ 0.69
RAB3IP-203ENST00000378809 ANKRD26Q9UPS8 1709 aa19.38■□□□□ 0.69
RAB3IP-203ENST00000378809 TCP11L2Q8N4U5 519 aa19.38■□□□□ 0.69
RAB3IP-203ENST00000378809 CCDC136Q96JN2 1154 aa19.38■□□□□ 0.69
RAB3IP-203ENST00000378809 KIF20BQ96Q89 1820 aa19.38■□□□□ 0.69
RAB3IP-203ENST00000378809 PRR36Q9H6K5 1346 aa19.38■□□□□ 0.69
RAB3IP-203ENST00000378809 PPM1GO15355 546 aaPredicted RBP19.37■□□□□ 0.69
RAB3IP-203ENST00000378809 CEP170BQ9Y4F5 1589 aaPredicted RBP19.37■□□□□ 0.69
RAB3IP-203ENST00000378809 E9PSI1 815 aa19.37■□□□□ 0.69
RAB3IP-203ENST00000378809 PLIN1O60240 522 aa19.37■□□□□ 0.69
RAB3IP-203ENST00000378809 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms