RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CIZ1Q9ULV3 898 aaPredicted RBP10.43□□□□□ -0.74
PTPRR-203ENST00000378778 TET3O43151 1660 aa10.43□□□□□ -0.74
PTPRR-203ENST00000378778 RRAGDQ9NQL2 400 aaPredicted RBP10.42□□□□□ -0.74
PTPRR-203ENST00000378778 ARHGAP5Q13017 1502 aa10.42□□□□□ -0.74
PTPRR-203ENST00000378778 SKOR2Q2VWA4 1001 aaPredicted RBP10.42□□□□□ -0.74
PTPRR-203ENST00000378778 CHMP7Q8WUX9 453 aaPredicted RBP10.42□□□□□ -0.74
PTPRR-203ENST00000378778 IQSEC2Q5JU85 1478 aa10.42□□□□□ -0.74
PTPRR-203ENST00000378778 RTEL1-TNFRSF6BF6WH68 1400 aa10.41□□□□□ -0.74
PTPRR-203ENST00000378778 SHPRHQ149N8 1683 aa10.41□□□□□ -0.74
PTPRR-203ENST00000378778 XRCC6P12956 609 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTPRR-203ENST00000378778 CANXP27824 592 aaKnown RBP10.41□□□□□ -0.74
PTPRR-203ENST00000378778 RGL3Q3MIN7 710 aa10.41□□□□□ -0.74
PTPRR-203ENST00000378778 TBC1D2Q9BYX2 928 aa10.41□□□□□ -0.74
PTPRR-203ENST00000378778 NCOA3Q9Y6Q9 1424 aa10.41□□□□□ -0.74
PTPRR-203ENST00000378778 APAF1O14727 1248 aa10.4□□□□□ -0.74
PTPRR-203ENST00000378778 HSP90AA1P07900 732 aaKnown RBP10.4□□□□□ -0.74
PTPRR-203ENST00000378778 ARAP3Q8WWN8 1544 aa10.4□□□□□ -0.74
PTPRR-203ENST00000378778 TPM2P07951 284 aa10.4□□□□□ -0.74
PTPRR-203ENST00000378778 REREQ9P2R6 1566 aa10.4□□□□□ -0.75
PTPRR-203ENST00000378778 BCAR3O75815 825 aa10.39□□□□□ -0.75
PTPRR-203ENST00000378778 SETBP1Q9Y6X0 1596 aa10.39□□□□□ -0.75
PTPRR-203ENST00000378778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTPRR-203ENST00000378778 SNX21Q969T3 373 aa10.39□□□□□ -0.75
PTPRR-203ENST00000378778 MAP3K4Q9Y6R4 1608 aa10.39□□□□□ -0.75
PTPRR-203ENST00000378778 TERF1P54274 439 aa10.38□□□□□ -0.75
PTPRR-203ENST00000378778 WWC1Q8IX03 1113 aa10.38□□□□□ -0.75
PTPRR-203ENST00000378778 RUNDC1Q96C34 613 aa10.38□□□□□ -0.75
PTPRR-203ENST00000378778 IFT172Q9UG01 1749 aa10.38□□□□□ -0.75
PTPRR-203ENST00000378778 VWDEQ8N2E2 1590 aa10.38□□□□□ -0.75
PTPRR-203ENST00000378778 RARSP54136 660 aaKnown RBP10.38□□□□□ -0.75
PTPRR-203ENST00000378778 CLTCL1P53675 1640 aa10.38□□□□□ -0.75
PTPRR-203ENST00000378778 ERVK-7P63135 1459 aa10.37□□□□□ -0.75
PTPRR-203ENST00000378778 TRAK2O60296 914 aa10.37□□□□□ -0.75
PTPRR-203ENST00000378778 SEC24BO95487 1268 aa10.37□□□□□ -0.75
PTPRR-203ENST00000378778 HSP90AA2PQ14568 343 aaPredicted RBP10.37□□□□□ -0.75
PTPRR-203ENST00000378778 PUS7Q96PZ0 661 aaKnown RBP10.37□□□□□ -0.75
PTPRR-203ENST00000378778 SLKQ9H2G2 1235 aaPredicted RBP10.37□□□□□ -0.75
PTPRR-203ENST00000378778 MYH16Q9H6N6 1097 aa10.37□□□□□ -0.75
PTPRR-203ENST00000378778 IBTKQ9P2D0 1353 aaPredicted RBP10.37□□□□□ -0.75
PTPRR-203ENST00000378778 KIF16BQ96L93 1317 aa10.37□□□□□ -0.75
PTPRR-203ENST00000378778 HDAC1Q13547 482 aaPredicted RBP10.37□□□□□ -0.75
PTPRR-203ENST00000378778 OSCARQ8IYS5 282 aa10.37□□□□□ -0.75
PTPRR-203ENST00000378778 PDZRN3Q9UPQ7 1066 aa10.37□□□□□ -0.75
PTPRR-203ENST00000378778 ADGRB2O60241 1585 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 ABCC1P33527 1531 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 HSCBQ8IWL3 235 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 GBP4Q96PP9 640 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
PTPRR-203ENST00000378778 NSD2O96028 1365 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 KIF1BO60333 1816 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 ARHGAP31Q2M1Z3 1444 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 NAP1L5Q96NT1 182 aaPredicted RBP10.36□□□□□ -0.75
PTPRR-203ENST00000378778 C22orf23Q9BZE7 217 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 GRPEL1Q9HAV7 217 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 COG6Q9Y2V7 657 aa10.36□□□□□ -0.75
PTPRR-203ENST00000378778 NRXN1Q9ULB1 1477 aa10.35□□□□□ -0.75
PTPRR-203ENST00000378778 ZC3H13Q5T200 1668 aaKnown RBP10.35□□□□□ -0.75
PTPRR-203ENST00000378778 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
PTPRR-203ENST00000378778 ESPNB1AK53 854 aa10.35□□□□□ -0.75
PTPRR-203ENST00000378778 DDIT3P35638 169 aa10.35□□□□□ -0.75
PTPRR-203ENST00000378778 RBM25P49756 843 aaKnown RBP10.35□□□□□ -0.75
PTPRR-203ENST00000378778 PLCH2O75038 1416 aa10.34□□□□□ -0.75
PTPRR-203ENST00000378778 INO80Q9ULG1 1556 aaPredicted RBP10.34□□□□□ -0.75
PTPRR-203ENST00000378778 MVPQ14764 893 aaKnown RBP10.34□□□□□ -0.75
PTPRR-203ENST00000378778 SMC5Q8IY18 1101 aa10.34□□□□□ -0.75
PTPRR-203ENST00000378778 PKNOX2Q96KN3 472 aa10.34□□□□□ -0.75
PTPRR-203ENST00000378778 ABCA6Q8N139 1617 aa10.34□□□□□ -0.75
PTPRR-203ENST00000378778 CCDC146Q8IYE0 955 aa10.34□□□□□ -0.75
PTPRR-203ENST00000378778 PANK1Q8TE04 598 aa10.34□□□□□ -0.75
PTPRR-203ENST00000378778 CHMP4BQ9H444 224 aaKnown RBP10.33□□□□□ -0.76
PTPRR-203ENST00000378778 HS1BP3Q53T59 392 aa10.33□□□□□ -0.76
PTPRR-203ENST00000378778 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
PTPRR-203ENST00000378778 CLEC17AQ6ZS10 378 aa10.33□□□□□ -0.76
PTPRR-203ENST00000378778 CFAP53Q96M91 514 aa10.33□□□□□ -0.76
PTPRR-203ENST00000378778 ZNF518AQ6AHZ1 1483 aa10.32□□□□□ -0.76
PTPRR-203ENST00000378778 TRIM44Q96DX7 344 aaPredicted RBP10.32□□□□□ -0.76
PTPRR-203ENST00000378778 MAP7D2Q96T17 732 aa10.32□□□□□ -0.76
PTPRR-203ENST00000378778 PCDHB15Q9Y5E8 787 aa10.32□□□□□ -0.76
PTPRR-203ENST00000378778 ABCC11Q96J66 1382 aa10.32□□□□□ -0.76
PTPRR-203ENST00000378778 CCDC173Q0VFZ6 552 aa10.32□□□□□ -0.76
PTPRR-203ENST00000378778 ZNF692Q9BU19 519 aaPredicted RBP10.32□□□□□ -0.76
PTPRR-203ENST00000378778 DDX19BQ9UMR2 479 aa10.32□□□□□ -0.76
PTPRR-203ENST00000378778 IL16Q14005 1332 aa10.32□□□□□ -0.76
PTPRR-203ENST00000378778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTPRR-203ENST00000378778 PPP1R9BQ96SB3 815 aa10.31□□□□□ -0.76
PTPRR-203ENST00000378778 PDCL3Q9H2J4 239 aa10.31□□□□□ -0.76
PTPRR-203ENST00000378778 FANCAO15360 1455 aa10.3□□□□□ -0.76
PTPRR-203ENST00000378778 ZFYVE16Q7Z3T8 1539 aa10.3□□□□□ -0.76
PTPRR-203ENST00000378778 EFCAB2Q5VUJ9 269 aa10.3□□□□□ -0.76
PTPRR-203ENST00000378778 DZIP1LQ8IYY4 767 aaKnown RBP10.3□□□□□ -0.76
PTPRR-203ENST00000378778 YEATS2Q9ULM3 1422 aa10.3□□□□□ -0.76
PTPRR-203ENST00000378778 GOLGA6L22H0YM25 854 aa10.29□□□□□ -0.76
PTPRR-203ENST00000378778 RAB3GAP1Q15042 981 aa10.29□□□□□ -0.76
PTPRR-203ENST00000378778 ANP32BQ92688 251 aaKnown RBP10.29□□□□□ -0.76
PTPRR-203ENST00000378778 ZNF428Q96B54 188 aa10.29□□□□□ -0.76
PTPRR-203ENST00000378778 UHRF1BP1LA0JNW5 1464 aa10.29□□□□□ -0.76
PTPRR-203ENST00000378778 PPRC1Q5VV67 1664 aaKnown RBP10.29□□□□□ -0.76
PTPRR-203ENST00000378778 LMTK2Q8IWU2 1503 aa10.29□□□□□ -0.76
PTPRR-203ENST00000378778 CFAP74Q9C0B2 1584 aa10.29□□□□□ -0.76
PTPRR-203ENST00000378778 TCP11L2Q8N4U5 519 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms