RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 SKOR2Q2VWA4 1001 aaPredicted RBP17.31■□□□□ 0.36
KIF3A-201ENST00000378735 NPM1P06748 294 aaKnown RBP eCLIP17.31■□□□□ 0.36
KIF3A-201ENST00000378735 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
KIF3A-201ENST00000378735 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
KIF3A-201ENST00000378735 RWDD1Q9H446 243 aaPredicted RBP17.31■□□□□ 0.36
KIF3A-201ENST00000378735 PDZRN3Q9UPQ7 1066 aa17.31■□□□□ 0.36
KIF3A-201ENST00000378735 FANCAO15360 1455 aa17.3■□□□□ 0.36
KIF3A-201ENST00000378735 PANK1Q8TE04 598 aa17.3■□□□□ 0.36
KIF3A-201ENST00000378735 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
KIF3A-201ENST00000378735 C22orf23Q9BZE7 217 aa17.29■□□□□ 0.36
KIF3A-201ENST00000378735 CIZ1Q9ULV3 898 aaPredicted RBP17.29■□□□□ 0.36
KIF3A-201ENST00000378735 DDIT3P35638 169 aa17.29■□□□□ 0.36
KIF3A-201ENST00000378735 IQGAP3Q86VI3 1631 aa17.28■□□□□ 0.36
KIF3A-201ENST00000378735 ZFYVE16Q7Z3T8 1539 aa17.28■□□□□ 0.36
KIF3A-201ENST00000378735 MYOM1P52179 1685 aa17.28■□□□□ 0.36
KIF3A-201ENST00000378735 CCDC146Q8IYE0 955 aa17.28■□□□□ 0.36
KIF3A-201ENST00000378735 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
KIF3A-201ENST00000378735 RGL3Q3MIN7 710 aa17.27■□□□□ 0.36
KIF3A-201ENST00000378735 HSCBQ8IWL3 235 aa17.27■□□□□ 0.36
KIF3A-201ENST00000378735 TRAPPC8Q9Y2L5 1435 aa17.27■□□□□ 0.35
KIF3A-201ENST00000378735 MAP7D2Q96T17 732 aa17.27■□□□□ 0.35
KIF3A-201ENST00000378735 CCDC173Q0VFZ6 552 aa17.26■□□□□ 0.35
KIF3A-201ENST00000378735 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
KIF3A-201ENST00000378735 PPP1R9BQ96SB3 815 aa17.26■□□□□ 0.35
KIF3A-201ENST00000378735 SNX21Q969T3 373 aa17.25■□□□□ 0.35
KIF3A-201ENST00000378735 GBP4Q96PP9 640 aa17.25■□□□□ 0.35
KIF3A-201ENST00000378735 OFD1O75665 1012 aa17.24■□□□□ 0.35
KIF3A-201ENST00000378735 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
KIF3A-201ENST00000378735 KIAA1211Q6ZU35 1233 aa17.23■□□□□ 0.35
KIF3A-201ENST00000378735 SPRYD3Q8NCJ5 442 aa17.23■□□□□ 0.35
KIF3A-201ENST00000378735 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
KIF3A-201ENST00000378735 WWC1Q8IX03 1113 aa17.23■□□□□ 0.35
KIF3A-201ENST00000378735 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
KIF3A-201ENST00000378735 ZSCAN30Q86W11 494 aa17.23■□□□□ 0.35
KIF3A-201ENST00000378735 SMC5Q8IY18 1101 aa17.23■□□□□ 0.35
KIF3A-201ENST00000378735 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
KIF3A-201ENST00000378735 MADDQ8WXG6 1647 aa17.22■□□□□ 0.35
KIF3A-201ENST00000378735 DMRT2Q9Y5R5 561 aa17.22■□□□□ 0.35
KIF3A-201ENST00000378735 ATP7AQ04656 1500 aa17.22■□□□□ 0.35
KIF3A-201ENST00000378735 SCAF11Q99590 1463 aaKnown RBP17.21■□□□□ 0.35
KIF3A-201ENST00000378735 KDM5AP29375 1690 aaKnown RBP17.21■□□□□ 0.35
KIF3A-201ENST00000378735 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
KIF3A-201ENST00000378735 GAS2L3Q86XJ1 694 aa17.21■□□□□ 0.35
KIF3A-201ENST00000378735 STAC3Q96MF2 364 aa17.21■□□□□ 0.35
KIF3A-201ENST00000378735 SPAG9O60271 1321 aaKnown RBP17.21■□□□□ 0.35
KIF3A-201ENST00000378735 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.34
KIF3A-201ENST00000378735 KANK1Q14678 1352 aa17.21■□□□□ 0.34
KIF3A-201ENST00000378735 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
KIF3A-201ENST00000378735 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
KIF3A-201ENST00000378735 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
KIF3A-201ENST00000378735 HS1BP3Q53T59 392 aa17.2■□□□□ 0.34
KIF3A-201ENST00000378735 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
KIF3A-201ENST00000378735 RAB3GAP1Q15042 981 aa17.2■□□□□ 0.34
KIF3A-201ENST00000378735 SLC24A1O60721 1099 aa17.19■□□□□ 0.34
KIF3A-201ENST00000378735 GLI2P10070 1586 aa17.19■□□□□ 0.34
KIF3A-201ENST00000378735 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
KIF3A-201ENST00000378735 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
KIF3A-201ENST00000378735 NEO1Q92859 1461 aa17.18■□□□□ 0.34
KIF3A-201ENST00000378735 MFAP1P55081 439 aaKnown RBP17.18■□□□□ 0.34
KIF3A-201ENST00000378735 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
KIF3A-201ENST00000378735 CD109Q6YHK3 1445 aa17.18■□□□□ 0.34
KIF3A-201ENST00000378735 WDR63Q8IWG1 891 aa17.18■□□□□ 0.34
KIF3A-201ENST00000378735 ANP32BQ92688 251 aaKnown RBP17.18■□□□□ 0.34
KIF3A-201ENST00000378735 RLBP1P12271 317 aa17.17■□□□□ 0.34
KIF3A-201ENST00000378735 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
KIF3A-201ENST00000378735 MTERF4Q7Z6M4 381 aaKnown RBP17.16■□□□□ 0.34
KIF3A-201ENST00000378735 PRDM4Q9UKN5 801 aa17.16■□□□□ 0.34
KIF3A-201ENST00000378735 CEP152O94986 1710 aa17.16■□□□□ 0.34
KIF3A-201ENST00000378735 CLEC17AQ6ZS10 378 aa17.16■□□□□ 0.34
KIF3A-201ENST00000378735 ARHGAP31Q2M1Z3 1444 aa17.16■□□□□ 0.34
KIF3A-201ENST00000378735 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
KIF3A-201ENST00000378735 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
KIF3A-201ENST00000378735 IQSEC2Q5JU85 1478 aa17.16■□□□□ 0.34
KIF3A-201ENST00000378735 SPHKAPQ2M3C7 1700 aa17.16■□□□□ 0.34
KIF3A-201ENST00000378735 MAP3K4Q9Y6R4 1608 aa17.15■□□□□ 0.34
KIF3A-201ENST00000378735 MSNP26038 577 aaKnown RBP17.15■□□□□ 0.34
KIF3A-201ENST00000378735 NASPP49321 788 aaPredicted RBP17.15■□□□□ 0.34
KIF3A-201ENST00000378735 KIAA1210Q9ULL0 1709 aa17.14■□□□□ 0.33
KIF3A-201ENST00000378735 VWDEQ8N2E2 1590 aa17.14■□□□□ 0.33
KIF3A-201ENST00000378735 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
KIF3A-201ENST00000378735 SHPRHQ149N8 1683 aa17.14■□□□□ 0.33
KIF3A-201ENST00000378735 RIPK4P57078 832 aa17.13■□□□□ 0.33
KIF3A-201ENST00000378735 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
KIF3A-201ENST00000378735 KIDINS220Q9ULH0 1771 aa17.13■□□□□ 0.33
KIF3A-201ENST00000378735 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
KIF3A-201ENST00000378735 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
KIF3A-201ENST00000378735 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
KIF3A-201ENST00000378735 RUNDC1Q96C34 613 aa17.12■□□□□ 0.33
KIF3A-201ENST00000378735 GOLGA6L22H0YM25 854 aa17.11■□□□□ 0.33
KIF3A-201ENST00000378735 AFAP1Q8N556 730 aa17.11■□□□□ 0.33
KIF3A-201ENST00000378735 ZNF500O60304 480 aaPredicted RBP17.11■□□□□ 0.33
KIF3A-201ENST00000378735 KLHL40Q2TBA0 621 aa17.11■□□□□ 0.33
KIF3A-201ENST00000378735 HSP90AB1P08238 724 aaKnown RBP17.1■□□□□ 0.33
KIF3A-201ENST00000378735 TET3O43151 1660 aa17.1■□□□□ 0.33
KIF3A-201ENST00000378735 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
KIF3A-201ENST00000378735 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
KIF3A-201ENST00000378735 ZKSCAN2Q63HK3 967 aa17.09■□□□□ 0.33
KIF3A-201ENST00000378735 ZNF445P59923 1031 aa17.08■□□□□ 0.33
KIF3A-201ENST00000378735 NOL7Q9UMY1 257 aaKnown RBP17.08■□□□□ 0.33
KIF3A-201ENST00000378735 DZIP1LQ8IYY4 767 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms