RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 LRPPRCP42704 1394 aaKnown RBP26.1■■□□□ 1.77
SSU72-204ENST00000378726 C3P01024 1663 aa26.1■■□□□ 1.77
SSU72-204ENST00000378726 FER1L4A9Z1Z3 1794 aa26.09■■□□□ 1.77
SSU72-204ENST00000378726 PPP2R1AP30153 589 aa26.08■■□□□ 1.77
SSU72-204ENST00000378726 SRPK2P78362 688 aaKnown RBP26.08■■□□□ 1.77
SSU72-204ENST00000378726 ABCC11Q96J66 1382 aa26.07■■□□□ 1.76
SSU72-204ENST00000378726 METP08581 1390 aa26.07■■□□□ 1.76
SSU72-204ENST00000378726 LTKP29376 864 aa26.07■■□□□ 1.76
SSU72-204ENST00000378726 WAPLQ7Z5K2 1190 aa26.07■■□□□ 1.76
SSU72-204ENST00000378726 TXNDC2Q86VQ3 553 aa26.06■■□□□ 1.76
SSU72-204ENST00000378726 NRXN3Q9Y4C0 1643 aa26.05■■□□□ 1.76
SSU72-204ENST00000378726 SETD1AO15047 1707 aaKnown RBP26.04■■□□□ 1.76
SSU72-204ENST00000378726 EID1Q9Y6B2 187 aa26.03■■□□□ 1.76
SSU72-204ENST00000378726 CDK19Q9BWU1 502 aa26.02■■□□□ 1.76
SSU72-204ENST00000378726 DLC1Q96QB1 1528 aa26.02■■□□□ 1.76
SSU72-204ENST00000378726 THEMISQ8N1K5 641 aaPredicted RBP26.02■■□□□ 1.76
SSU72-204ENST00000378726 NSD3Q9BZ95 1437 aa26.02■■□□□ 1.76
SSU72-204ENST00000378726 PLEKHH1Q9ULM0 1364 aa26■■□□□ 1.75
SSU72-204ENST00000378726 IRX6P78412 446 aaPredicted RBP25.99■■□□□ 1.75
SSU72-204ENST00000378726 ANKRD36BQ8N2N9 1353 aa25.98■■□□□ 1.75
SSU72-204ENST00000378726 PLEKHG1Q9ULL1 1385 aa25.98■■□□□ 1.75
SSU72-204ENST00000378726 ATAD2Q6PL18 1390 aa25.98■■□□□ 1.75
SSU72-204ENST00000378726 SENP3-EIF4A1A0A087X0R7 540 aa25.98■■□□□ 1.75
SSU72-204ENST00000378726 SIRT1Q96EB6 747 aa25.98■■□□□ 1.75
SSU72-204ENST00000378726 NINLQ9Y2I6 1382 aa25.96■■□□□ 1.75
SSU72-204ENST00000378726 ADAMTS13Q76LX8 1427 aa25.96■■□□□ 1.75
SSU72-204ENST00000378726 CGNL1Q0VF96 1302 aa25.95■■□□□ 1.74
SSU72-204ENST00000378726 MORC1Q86VD1 984 aa25.94■■□□□ 1.74
SSU72-204ENST00000378726 SLC26A8Q96RN1 970 aa25.94■■□□□ 1.74
SSU72-204ENST00000378726 SLIT1O75093 1534 aa25.93■■□□□ 1.74
SSU72-204ENST00000378726 ARHGAP23Q9P227 1491 aa25.93■■□□□ 1.74
SSU72-204ENST00000378726 TERF2IPQ9NYB0 399 aa25.92■■□□□ 1.74
SSU72-204ENST00000378726 FAM135BQ49AJ0 1406 aa25.91■■□□□ 1.74
SSU72-204ENST00000378726 CABP1Q9NZU7 370 aa25.91■■□□□ 1.74
SSU72-204ENST00000378726 ADAMTS8Q9UP79 889 aa25.91■■□□□ 1.74
SSU72-204ENST00000378726 TECPR2O15040 1411 aa25.9■■□□□ 1.74
SSU72-204ENST00000378726 A0A1W2PP64 1363 aa25.9■■□□□ 1.74
SSU72-204ENST00000378726 WASLO00401 505 aaPredicted RBP25.9■■□□□ 1.74
SSU72-204ENST00000378726 WDR43Q15061 677 aaKnown RBP eCLIP25.89■■□□□ 1.74
SSU72-204ENST00000378726 RIMS1Q86UR5 1692 aaKnown RBP25.89■■□□□ 1.73
SSU72-204ENST00000378726 INSRP06213 1382 aa25.89■■□□□ 1.73
SSU72-204ENST00000378726 TNNT2P45379 298 aaPredicted RBP25.87■■□□□ 1.73
SSU72-204ENST00000378726 TBX22Q9Y458 520 aa25.87■■□□□ 1.73
SSU72-204ENST00000378726 HDGFL2Q7Z4V5 671 aaPredicted RBP25.87■■□□□ 1.73
SSU72-204ENST00000378726 MED14O60244 1454 aa25.87■■□□□ 1.73
SSU72-204ENST00000378726 SALL2Q9Y467 1007 aaPredicted RBP25.86■■□□□ 1.73
SSU72-204ENST00000378726 ROBO2Q9HCK4 1378 aa25.85■■□□□ 1.73
SSU72-204ENST00000378726 USP32Q8NFA0 1604 aa25.84■■□□□ 1.73
SSU72-204ENST00000378726 NSD2O96028 1365 aa25.83■■□□□ 1.73
SSU72-204ENST00000378726 KNDC1Q76NI1 1749 aa25.83■■□□□ 1.73
SSU72-204ENST00000378726 ADAMTSL3P82987 1691 aa25.83■■□□□ 1.72
SSU72-204ENST00000378726 CD163L1Q9NR16 1453 aa25.83■■□□□ 1.72
SSU72-204ENST00000378726 BLMP54132 1417 aaPredicted RBP25.83■■□□□ 1.72
SSU72-204ENST00000378726 CPS1P31327 1500 aa25.82■■□□□ 1.72
SSU72-204ENST00000378726 AMOTL2Q9Y2J4 779 aa25.82■■□□□ 1.72
SSU72-204ENST00000378726 NUDCQ9Y266 331 aa25.81■■□□□ 1.72
SSU72-204ENST00000378726 CEP170BQ9Y4F5 1589 aaPredicted RBP25.81■■□□□ 1.72
SSU72-204ENST00000378726 SMG6Q86US8 1419 aaKnown RBP25.8■■□□□ 1.72
SSU72-204ENST00000378726 PTPRUQ92729 1446 aa25.8■■□□□ 1.72
SSU72-204ENST00000378726 NUDT16Q96DE0 195 aaKnown RBP25.8■■□□□ 1.72
SSU72-204ENST00000378726 MSH5O43196 834 aa25.79■■□□□ 1.72
SSU72-204ENST00000378726 FYB1O15117 783 aa25.79■■□□□ 1.72
SSU72-204ENST00000378726 GGNBP2Q9H3C7 697 aa25.79■■□□□ 1.72
SSU72-204ENST00000378726 POLR3AO14802 1390 aaPredicted RBP25.78■■□□□ 1.72
SSU72-204ENST00000378726 ERICH6BQ5W0A0 696 aa25.78■■□□□ 1.72
SSU72-204ENST00000378726 MTHFSP49914 203 aa25.77■■□□□ 1.72
SSU72-204ENST00000378726 CCDC61Q9Y6R9 512 aa25.77■■□□□ 1.72
SSU72-204ENST00000378726 ANKLE2Q86XL3 938 aa25.76■■□□□ 1.71
SSU72-204ENST00000378726 PPP4R2Q9NY27 417 aa25.75■■□□□ 1.71
SSU72-204ENST00000378726 BCL11AQ9H165 835 aa25.75■■□□□ 1.71
SSU72-204ENST00000378726 PDE3BQ13370 1112 aa25.74■■□□□ 1.71
SSU72-204ENST00000378726 PPIP5K1Q6PFW1 1433 aa25.74■■□□□ 1.71
SSU72-204ENST00000378726 NCKAP5LQ9HCH0 1330 aa25.73■■□□□ 1.71
SSU72-204ENST00000378726 ATP7BP35670 1465 aa25.73■■□□□ 1.71
SSU72-204ENST00000378726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.71■■□□□ 1.71
SSU72-204ENST00000378726 SETD1BQ9UPS6 1966 aaKnown RBP25.71■■□□□ 1.71
SSU72-204ENST00000378726 CFAP53Q96M91 514 aa25.71■■□□□ 1.71
SSU72-204ENST00000378726 PRR36Q9H6K5 1346 aa25.7■■□□□ 1.7
SSU72-204ENST00000378726 FANCIQ9NVI1 1328 aa25.7■■□□□ 1.7
SSU72-204ENST00000378726 CCDC146Q8IYE0 955 aa25.69■■□□□ 1.7
SSU72-204ENST00000378726 DIP2AQ14689 1571 aa25.69■■□□□ 1.7
SSU72-204ENST00000378726 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.69■■□□□ 1.7
SSU72-204ENST00000378726 CPSF1Q10570 1443 aaKnown RBP25.69■■□□□ 1.7
SSU72-204ENST00000378726 CDCA7LQ96GN5 454 aa25.67■■□□□ 1.7
SSU72-204ENST00000378726 NUTM2FA1L443 756 aa25.66■■□□□ 1.7
SSU72-204ENST00000378726 PTCH1Q13635 1447 aa25.66■■□□□ 1.7
SSU72-204ENST00000378726 ZNF692Q9BU19 519 aaPredicted RBP25.65■■□□□ 1.7
SSU72-204ENST00000378726 KCNA6P17658 529 aa25.65■■□□□ 1.7
SSU72-204ENST00000378726 PIK3R4Q99570 1358 aa25.65■■□□□ 1.7
SSU72-204ENST00000378726 APAF1O14727 1248 aa25.63■■□□□ 1.69
SSU72-204ENST00000378726 B4GALNT3Q6L9W6 998 aa25.63■■□□□ 1.69
SSU72-204ENST00000378726 ZNF142P52746 1687 aaPredicted RBP25.63■■□□□ 1.69
SSU72-204ENST00000378726 ADGRB2O60241 1585 aa25.63■■□□□ 1.69
SSU72-204ENST00000378726 EDC4Q6P2E9 1401 aaKnown RBP25.63■■□□□ 1.69
SSU72-204ENST00000378726 PLEKHG3A1L390 1219 aa25.6■■□□□ 1.69
SSU72-204ENST00000378726 CDC42BPGQ6DT37 1551 aa25.59■■□□□ 1.69
SSU72-204ENST00000378726 NME9Q86XW9 330 aa25.59■■□□□ 1.69
SSU72-204ENST00000378726 ACEP12821 1306 aa25.57■■□□□ 1.68
SSU72-204ENST00000378726 ANKRD26Q9UPS8 1709 aa25.57■■□□□ 1.68
SSU72-204ENST00000378726 ZNF521Q96K83 1311 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms