RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 NUTM2DQ5VT03 806 aaPredicted RBP17.67■□□□□ 0.42
PRDM16-203ENST00000378391 RUFY2Q8WXA3 655 aa17.67■□□□□ 0.42
PRDM16-203ENST00000378391 RUNDC1Q96C34 613 aa17.66■□□□□ 0.42
PRDM16-203ENST00000378391 CLSTN1O94985 981 aa17.65■□□□□ 0.42
PRDM16-203ENST00000378391 HOMEZQ8IX15 550 aa17.65■□□□□ 0.42
PRDM16-203ENST00000378391 COG3Q96JB2 828 aa17.65■□□□□ 0.42
PRDM16-203ENST00000378391 PLEKHH2Q8IVE3 1493 aa17.65■□□□□ 0.42
PRDM16-203ENST00000378391 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.65■□□□□ 0.42
PRDM16-203ENST00000378391 C22orf23Q9BZE7 217 aa17.65■□□□□ 0.42
PRDM16-203ENST00000378391 FAM13BQ9NYF5 915 aa17.65■□□□□ 0.42
PRDM16-203ENST00000378391 RASSF8Q8NHQ8 419 aa17.65■□□□□ 0.42
PRDM16-203ENST00000378391 DIAPH3Q9NSV4 1193 aa17.65■□□□□ 0.42
PRDM16-203ENST00000378391 ZKSCAN1P17029 563 aaPredicted RBP17.64■□□□□ 0.41
PRDM16-203ENST00000378391 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.41
PRDM16-203ENST00000378391 FOXD4L6Q3SYB3 417 aaPredicted RBP17.64■□□□□ 0.41
PRDM16-203ENST00000378391 FOXD4L3Q6VB84 417 aaPredicted RBP17.64■□□□□ 0.41
PRDM16-203ENST00000378391 EID1Q9Y6B2 187 aa17.64■□□□□ 0.41
PRDM16-203ENST00000378391 UBE2Q2Q8WVN8 375 aa17.63■□□□□ 0.41
PRDM16-203ENST00000378391 MRE11P49959 708 aa17.63■□□□□ 0.41
PRDM16-203ENST00000378391 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
PRDM16-203ENST00000378391 RALGAPBQ86X10 1494 aa17.62■□□□□ 0.41
PRDM16-203ENST00000378391 TEX14Q8IWB6 1497 aa17.62■□□□□ 0.41
PRDM16-203ENST00000378391 RIPK4P57078 832 aa17.62■□□□□ 0.41
PRDM16-203ENST00000378391 SLFN5Q08AF3 891 aa17.62■□□□□ 0.41
PRDM16-203ENST00000378391 CCDC66A2RUB6 948 aa17.62■□□□□ 0.41
PRDM16-203ENST00000378391 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
PRDM16-203ENST00000378391 LTV1Q96GA3 475 aaPredicted RBP17.6■□□□□ 0.41
PRDM16-203ENST00000378391 PDZRN3Q9UPQ7 1066 aa17.6■□□□□ 0.41
PRDM16-203ENST00000378391 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
PRDM16-203ENST00000378391 CREBRFQ8IUR6 639 aa17.59■□□□□ 0.41
PRDM16-203ENST00000378391 TOMM22Q9NS69 142 aa17.59■□□□□ 0.41
PRDM16-203ENST00000378391 GCC2Q8IWJ2 1684 aa17.59■□□□□ 0.41
PRDM16-203ENST00000378391 TEX35Q5T0J7 233 aa17.59■□□□□ 0.41
PRDM16-203ENST00000378391 GPS2Q13227 327 aa17.59■□□□□ 0.41
PRDM16-203ENST00000378391 CPLX2Q6PUV4 134 aaKnown RBP17.59■□□□□ 0.41
PRDM16-203ENST00000378391 LRRFIP1Q32MZ4 808 aaKnown RBP17.58■□□□□ 0.41
PRDM16-203ENST00000378391 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.41
PRDM16-203ENST00000378391 LNPKQ9C0E8 428 aa17.58■□□□□ 0.41
PRDM16-203ENST00000378391 TRAK2O60296 914 aa17.58■□□□□ 0.4
PRDM16-203ENST00000378391 TSR1Q2NL82 804 aaKnown RBP17.58■□□□□ 0.4
PRDM16-203ENST00000378391 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.4
PRDM16-203ENST00000378391 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.4
PRDM16-203ENST00000378391 MAP7D2Q96T17 732 aa17.58■□□□□ 0.4
PRDM16-203ENST00000378391 ANO2Q9NQ90 1003 aa17.58■□□□□ 0.4
PRDM16-203ENST00000378391 TPM1P09493 284 aa17.57■□□□□ 0.4
PRDM16-203ENST00000378391 GNAI1P63096 354 aa17.57■□□□□ 0.4
PRDM16-203ENST00000378391 PARD3Q8TEW0 1356 aa17.57■□□□□ 0.4
PRDM16-203ENST00000378391 TPD52L1Q16890 204 aaPredicted RBP17.56■□□□□ 0.4
PRDM16-203ENST00000378391 SPATA31E1Q6ZUB1 1445 aa17.56■□□□□ 0.4
PRDM16-203ENST00000378391 TEFQ10587 303 aa17.56■□□□□ 0.4
PRDM16-203ENST00000378391 RNF20Q5VTR2 975 aa17.56■□□□□ 0.4
PRDM16-203ENST00000378391 PTPRGP23470 1445 aa17.55■□□□□ 0.4
PRDM16-203ENST00000378391 MCTP1Q6DN14 999 aa17.55■□□□□ 0.4
PRDM16-203ENST00000378391 RRP12Q5JTH9 1297 aaKnown RBP17.55■□□□□ 0.4
PRDM16-203ENST00000378391 DISP3Q9P2K9 1392 aa17.55■□□□□ 0.4
PRDM16-203ENST00000378391 NINLQ9Y2I6 1382 aa17.55■□□□□ 0.4
PRDM16-203ENST00000378391 NEXNQ0ZGT2 675 aa17.54■□□□□ 0.4
PRDM16-203ENST00000378391 C8orf34Q49A92 452 aa17.54■□□□□ 0.4
PRDM16-203ENST00000378391 NUTM2FA1L443 756 aa17.54■□□□□ 0.4
PRDM16-203ENST00000378391 C9orf78Q9NZ63 289 aaPredicted RBP17.54■□□□□ 0.4
PRDM16-203ENST00000378391 MINK1Q8N4C8 1332 aaPredicted RBP17.54■□□□□ 0.4
PRDM16-203ENST00000378391 CCAR2Q8N163 923 aaKnown RBP17.54■□□□□ 0.4
PRDM16-203ENST00000378391 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
PRDM16-203ENST00000378391 SMC3Q9UQE7 1217 aa17.54■□□□□ 0.4
PRDM16-203ENST00000378391 CDC45O75419 566 aa17.53■□□□□ 0.4
PRDM16-203ENST00000378391 RDXP35241 583 aaKnown RBP17.53■□□□□ 0.4
PRDM16-203ENST00000378391 IFIT2P09913 472 aaKnown RBP17.53■□□□□ 0.4
PRDM16-203ENST00000378391 BICD2Q8TD16 824 aa17.53■□□□□ 0.4
PRDM16-203ENST00000378391 KDM6BO15054 1643 aa17.53■□□□□ 0.4
PRDM16-203ENST00000378391 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.4
PRDM16-203ENST00000378391 NASPP49321 788 aaPredicted RBP17.52■□□□□ 0.4
PRDM16-203ENST00000378391 AKAP17AQ02040 695 aaKnown RBP17.52■□□□□ 0.4
PRDM16-203ENST00000378391 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.4
PRDM16-203ENST00000378391 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
PRDM16-203ENST00000378391 MTERF4Q7Z6M4 381 aaKnown RBP17.52■□□□□ 0.4
PRDM16-203ENST00000378391 AEBP1Q8IUX7 1158 aa17.52■□□□□ 0.4
PRDM16-203ENST00000378391 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.4
PRDM16-203ENST00000378391 SYNE3Q6ZMZ3 975 aa17.52■□□□□ 0.39
PRDM16-203ENST00000378391 PZPP20742 1482 aa17.52■□□□□ 0.39
PRDM16-203ENST00000378391 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.39
PRDM16-203ENST00000378391 PES1O00541 588 aaKnown RBP17.51■□□□□ 0.39
PRDM16-203ENST00000378391 TAF3Q5VWG9 929 aa17.51■□□□□ 0.39
PRDM16-203ENST00000378391 KIF14Q15058 1648 aa17.51■□□□□ 0.39
PRDM16-203ENST00000378391 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
PRDM16-203ENST00000378391 CCDC70Q6NSX1 233 aa17.5■□□□□ 0.39
PRDM16-203ENST00000378391 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
PRDM16-203ENST00000378391 VPS37CA5D8V6 355 aaPredicted RBP17.5■□□□□ 0.39
PRDM16-203ENST00000378391 SASS6Q6UVJ0 657 aa17.5■□□□□ 0.39
PRDM16-203ENST00000378391 MAGI3Q5TCQ9 1506 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 MCM4P33991 863 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 CCDC39Q9UFE4 941 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
PRDM16-203ENST00000378391 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 CEP89Q96ST8 783 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 ARHGAP5Q13017 1502 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 CPLX1O14810 134 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 TRIM29Q14134 588 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 HSP90AB3PQ58FF7 597 aa17.49■□□□□ 0.39
PRDM16-203ENST00000378391 PLB1Q6P1J6 1458 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms