RNA–Protein interactions for RNA: ENST00000378389.5

PRDM16-202, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-202ENST00000378389 ORAI2Q96SN7 254 aa28.72■■■□□ 2.19
PRDM16-202ENST00000378389 COL22A1Q8NFW1 1626 aaPredicted RBP28.72■■■□□ 2.19
PRDM16-202ENST00000378389 PIK3C2GO75747 1445 aa28.71■■■□□ 2.19
PRDM16-202ENST00000378389 LRPPRCP42704 1394 aaKnown RBP28.71■■■□□ 2.19
PRDM16-202ENST00000378389 ABCC11Q96J66 1382 aa28.71■■■□□ 2.19
PRDM16-202ENST00000378389 UPF1Q92900 1129 aaKnown RBP eCLIP28.67■■■□□ 2.18
PRDM16-202ENST00000378389 NRXN1Q9ULB1 1477 aa28.66■■■□□ 2.18
PRDM16-202ENST00000378389 PXDNQ92626 1479 aa28.65■■■□□ 2.18
PRDM16-202ENST00000378389 C8orf37Q96NL8 207 aa28.63■■■□□ 2.17
PRDM16-202ENST00000378389 MYOM2P54296 1465 aa28.63■■■□□ 2.17
PRDM16-202ENST00000378389 NPHP3Q7Z494 1330 aa28.63■■■□□ 2.17
PRDM16-202ENST00000378389 RBM6P78332 1123 aaKnown RBP28.62■■■□□ 2.17
PRDM16-202ENST00000378389 RGL3Q3MIN7 710 aa28.62■■■□□ 2.17
PRDM16-202ENST00000378389 RGS12O14924 1447 aa28.61■■■□□ 2.17
PRDM16-202ENST00000378389 SIRT1Q96EB6 747 aa28.61■■■□□ 2.17
PRDM16-202ENST00000378389 YTHDC2Q9H6S0 1430 aaKnown RBP28.6■■■□□ 2.17
PRDM16-202ENST00000378389 QTRT2Q9H974 415 aaKnown RBP28.59■■■□□ 2.17
PRDM16-202ENST00000378389 FMN2Q9NZ56 1722 aa28.59■■■□□ 2.17
PRDM16-202ENST00000378389 FNBP4Q8N3X1 1017 aaPredicted RBP28.58■■■□□ 2.17
PRDM16-202ENST00000378389 WAPLQ7Z5K2 1190 aa28.57■■■□□ 2.16
PRDM16-202ENST00000378389 ESCO1Q5FWF5 840 aa28.56■■■□□ 2.16
PRDM16-202ENST00000378389 NGLY1Q96IV0 654 aa28.56■■■□□ 2.16
PRDM16-202ENST00000378389 PLEKHH1Q9ULM0 1364 aa28.56■■■□□ 2.16
PRDM16-202ENST00000378389 C14orf93Q9H972 538 aaKnown RBP28.55■■■□□ 2.16
PRDM16-202ENST00000378389 KIF1AQ12756 1690 aa28.54■■■□□ 2.16
PRDM16-202ENST00000378389 ADAMTS2O95450 1211 aa28.54■■■□□ 2.16
PRDM16-202ENST00000378389 TMEM132EQ6IEE7 984 aa28.54■■■□□ 2.16
PRDM16-202ENST00000378389 STK26Q9P289 416 aa28.54■■■□□ 2.16
PRDM16-202ENST00000378389 ATRNO75882 1429 aa28.52■■■□□ 2.16
PRDM16-202ENST00000378389 MARF1Q9Y4F3 1742 aaKnown RBP28.52■■■□□ 2.16
PRDM16-202ENST00000378389 FOXO3O43524 673 aa28.49■■■□□ 2.15
PRDM16-202ENST00000378389 USP21Q9UK80 565 aa28.48■■■□□ 2.15
PRDM16-202ENST00000378389 TRPC5Q9UL62 973 aaPredicted RBP28.48■■■□□ 2.15
PRDM16-202ENST00000378389 DLC1Q96QB1 1528 aa28.48■■■□□ 2.15
PRDM16-202ENST00000378389 RAB3GAP2Q9H2M9 1393 aa28.47■■■□□ 2.15
PRDM16-202ENST00000378389 DHX57Q6P158 1386 aaKnown RBP28.46■■■□□ 2.15
PRDM16-202ENST00000378389 BCL9LQ86UU0 1499 aa28.46■■■□□ 2.15
PRDM16-202ENST00000378389 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.44■■■□□ 2.14
PRDM16-202ENST00000378389 SPATA31A3Q5VYP0 1347 aa28.43■■■□□ 2.14
PRDM16-202ENST00000378389 ADGRB1O14514 1584 aa28.42■■■□□ 2.14
PRDM16-202ENST00000378389 CFAP70Q5T0N1 1121 aa28.42■■■□□ 2.14
PRDM16-202ENST00000378389 ADGRB2O60241 1585 aa28.41■■■□□ 2.14
PRDM16-202ENST00000378389 XPCQ01831 940 aaPredicted RBP28.4■■■□□ 2.14
PRDM16-202ENST00000378389 ATAD2Q6PL18 1390 aa28.39■■■□□ 2.14
PRDM16-202ENST00000378389 NUTM2FA1L443 756 aa28.39■■■□□ 2.14
PRDM16-202ENST00000378389 RGPD8O14715 1765 aaPredicted RBP28.39■■■□□ 2.13
PRDM16-202ENST00000378389 SLIT2O94813 1529 aa28.38■■■□□ 2.13
PRDM16-202ENST00000378389 ANKARQ7Z5J8 1434 aa28.37■■■□□ 2.13
PRDM16-202ENST00000378389 EP400Q96L91 3159 aa28.37■■■□□ 2.13
PRDM16-202ENST00000378389 USP32Q8NFA0 1604 aa28.36■■■□□ 2.13
PRDM16-202ENST00000378389 SBNO1A3KN83 1393 aa28.36■■■□□ 2.13
PRDM16-202ENST00000378389 TNS3Q68CZ2 1445 aa28.35■■■□□ 2.13
PRDM16-202ENST00000378389 HRCP23327 699 aa28.35■■■□□ 2.13
PRDM16-202ENST00000378389 KRT28Q7Z3Y7 464 aa28.34■■■□□ 2.13
PRDM16-202ENST00000378389 STAC3Q96MF2 364 aa28.34■■■□□ 2.13
PRDM16-202ENST00000378389 PRAM1Q96QH2 718 aa28.34■■■□□ 2.13
PRDM16-202ENST00000378389 PHF8Q9UPP1 1060 aa28.34■■■□□ 2.13
PRDM16-202ENST00000378389 GJD4Q96KN9 370 aaPredicted RBP28.3■■■□□ 2.12
PRDM16-202ENST00000378389 ABCA3Q99758 1704 aa28.29■■■□□ 2.12
PRDM16-202ENST00000378389 PSME1Q06323 249 aa28.29■■■□□ 2.12
PRDM16-202ENST00000378389 UNC5CLQ8IV45 518 aa28.29■■■□□ 2.12
PRDM16-202ENST00000378389 GLI3P10071 1580 aa28.28■■■□□ 2.12
PRDM16-202ENST00000378389 ARHGEF10O15013 1369 aa28.27■■■□□ 2.12
PRDM16-202ENST00000378389 RALGAPBQ86X10 1494 aa28.27■■■□□ 2.12
PRDM16-202ENST00000378389 NWD2Q9ULI1 1742 aa28.26■■■□□ 2.12
PRDM16-202ENST00000378389 TRPM3Q9HCF6 1732 aaPredicted RBP28.25■■■□□ 2.11
PRDM16-202ENST00000378389 EIF3AQ14152 1382 aaKnown RBP28.24■■■□□ 2.11
PRDM16-202ENST00000378389 POGKQ9P215 609 aa28.24■■■□□ 2.11
PRDM16-202ENST00000378389 TULP4Q9NRJ4 1543 aa28.23■■■□□ 2.11
PRDM16-202ENST00000378389 SAFB2Q14151 953 aaKnown RBP eCLIP28.22■■■□□ 2.11
PRDM16-202ENST00000378389 CCDC125Q86Z20 511 aa28.21■■■□□ 2.11
PRDM16-202ENST00000378389 PLCH1Q4KWH8 1693 aa28.21■■■□□ 2.11
PRDM16-202ENST00000378389 ALS2Q96Q42 1657 aa28.2■■■□□ 2.11
PRDM16-202ENST00000378389 SRCAPQ6ZRS2 3230 aa28.19■■■□□ 2.1
PRDM16-202ENST00000378389 DCAF11Q8TEB1 546 aa28.18■■■□□ 2.1
PRDM16-202ENST00000378389 TRAK1Q9UPV9 953 aa28.18■■■□□ 2.1
PRDM16-202ENST00000378389 PRR36Q9H6K5 1346 aa28.18■■■□□ 2.1
PRDM16-202ENST00000378389 VPS72Q15906 364 aa28.17■■■□□ 2.1
PRDM16-202ENST00000378389 ARHGEF28Q8N1W1 1705 aaKnown RBP28.17■■■□□ 2.1
PRDM16-202ENST00000378389 WASLO00401 505 aaPredicted RBP28.15■■■□□ 2.1
PRDM16-202ENST00000378389 ONECUT3O60422 494 aaPredicted RBP28.15■■■□□ 2.1
PRDM16-202ENST00000378389 CABLES1Q8TDN4 633 aa28.15■■■□□ 2.1
PRDM16-202ENST00000378389 PMFBP1Q8TBY8 1022 aa28.14■■■□□ 2.1
PRDM16-202ENST00000378389 BRWD3Q6RI45 1802 aa28.13■■■□□ 2.09
PRDM16-202ENST00000378389 KDM2AQ9Y2K7 1162 aa28.13■■■□□ 2.09
PRDM16-202ENST00000378389 NRAPQ86VF7 1730 aa28.12■■■□□ 2.09
PRDM16-202ENST00000378389 CRYBG1Q9Y4K1 1723 aa28.12■■■□□ 2.09
PRDM16-202ENST00000378389 MINK1Q8N4C8 1332 aaPredicted RBP28.12■■■□□ 2.09
PRDM16-202ENST00000378389 KIAA1210Q9ULL0 1709 aa28.12■■■□□ 2.09
PRDM16-202ENST00000378389 GPRASP1Q5JY77 1395 aa28.11■■■□□ 2.09
PRDM16-202ENST00000378389 HIRIP3Q9BW71 556 aaPredicted RBP28.11■■■□□ 2.09
PRDM16-202ENST00000378389 ATP7BP35670 1465 aa28.1■■■□□ 2.09
PRDM16-202ENST00000378389 ITSN1Q15811 1721 aa28.1■■■□□ 2.09
PRDM16-202ENST00000378389 HAP1P54257 671 aaPredicted RBP28.1■■■□□ 2.09
PRDM16-202ENST00000378389 BLMP54132 1417 aaPredicted RBP28.09■■■□□ 2.09
PRDM16-202ENST00000378389 FAM83GA6ND36 823 aa28.08■■■□□ 2.09
PRDM16-202ENST00000378389 COL14A1Q05707 1796 aaKnown RBP28.08■■■□□ 2.09
PRDM16-202ENST00000378389 SEPT12Q8IYM1 358 aa28.06■■■□□ 2.08
PRDM16-202ENST00000378389 LMOD2Q6P5Q4 547 aa28.05■■■□□ 2.08
PRDM16-202ENST00000378389 TOPAZ1Q8N9V7 1692 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms