RNA–Protein interactions for RNA: ENST00000378292.7

TPM2-203, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM2, Length 2,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-203ENST00000378292 USP32Q8NFA0 1604 aa35.45■■■■□ 3.27
TPM2-203ENST00000378292 RIMS2Q9UQ26 1411 aa35.45■■■■□ 3.27
TPM2-203ENST00000378292 PRAM1Q96QH2 718 aa35.44■■■■□ 3.26
TPM2-203ENST00000378292 ANKRD36BQ8N2N9 1353 aa35.43■■■■□ 3.26
TPM2-203ENST00000378292 MORC1Q86VD1 984 aa35.42■■■■□ 3.26
TPM2-203ENST00000378292 POGKQ9P215 609 aa35.42■■■■□ 3.26
TPM2-203ENST00000378292 RCAN3Q9UKA8 241 aa35.42■■■■□ 3.26
TPM2-203ENST00000378292 CGNL1Q0VF96 1302 aa35.41■■■■□ 3.26
TPM2-203ENST00000378292 B4GALNT3Q6L9W6 998 aa35.39■■■■□ 3.26
TPM2-203ENST00000378292 SRPK2P78362 688 aaKnown RBP35.38■■■■□ 3.25
TPM2-203ENST00000378292 MINK1Q8N4C8 1332 aaPredicted RBP35.38■■■■□ 3.25
TPM2-203ENST00000378292 NINLQ9Y2I6 1382 aa35.37■■■■□ 3.25
TPM2-203ENST00000378292 POLR3AO14802 1390 aaPredicted RBP35.36■■■■□ 3.25
TPM2-203ENST00000378292 PLEKHH1Q9ULM0 1364 aa35.36■■■■□ 3.25
TPM2-203ENST00000378292 RRP1P56182 461 aaKnown RBP35.34■■■■□ 3.25
TPM2-203ENST00000378292 ATAD2Q6PL18 1390 aa35.32■■■■□ 3.25
TPM2-203ENST00000378292 TNNT2P45379 298 aaPredicted RBP35.32■■■■□ 3.25
TPM2-203ENST00000378292 CCDC146Q8IYE0 955 aa35.32■■■■□ 3.24
TPM2-203ENST00000378292 SETD1AO15047 1707 aaKnown RBP35.31■■■■□ 3.24
TPM2-203ENST00000378292 NSD2O96028 1365 aa35.3■■■■□ 3.24
TPM2-203ENST00000378292 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.3■■■■□ 3.24
TPM2-203ENST00000378292 TNRQ92752 1358 aa35.3■■■■□ 3.24
TPM2-203ENST00000378292 ZNF521Q96K83 1311 aa35.29■■■■□ 3.24
TPM2-203ENST00000378292 A0A1W2PP64 1363 aa35.29■■■■□ 3.24
TPM2-203ENST00000378292 DLC1Q96QB1 1528 aa35.28■■■■□ 3.24
TPM2-203ENST00000378292 NRXN3Q9Y4C0 1643 aa35.25■■■■□ 3.23
TPM2-203ENST00000378292 ABCC11Q96J66 1382 aa35.23■■■■□ 3.23
TPM2-203ENST00000378292 APAF1O14727 1248 aa35.23■■■■□ 3.23
TPM2-203ENST00000378292 CDK19Q9BWU1 502 aa35.23■■■■□ 3.23
TPM2-203ENST00000378292 GOLGA2Q08379 1002 aa35.22■■■■□ 3.23
TPM2-203ENST00000378292 SHPRHQ149N8 1683 aa35.22■■■■□ 3.23
TPM2-203ENST00000378292 TERF2IPQ9NYB0 399 aa35.21■■■■□ 3.23
TPM2-203ENST00000378292 MTHFSP49914 203 aa35.21■■■■□ 3.23
TPM2-203ENST00000378292 WAPLQ7Z5K2 1190 aa35.2■■■■□ 3.23
TPM2-203ENST00000378292 HDGFP51858 240 aaKnown RBP35.2■■■■□ 3.22
TPM2-203ENST00000378292 CD163L1Q9NR16 1453 aa35.19■■■■□ 3.22
TPM2-203ENST00000378292 DUSP27Q5VZP5 1158 aa35.18■■■■□ 3.22
TPM2-203ENST00000378292 CCDC136Q96JN2 1154 aa35.18■■■■□ 3.22
TPM2-203ENST00000378292 METP08581 1390 aa35.17■■■■□ 3.22
TPM2-203ENST00000378292 UBR1Q8IWV7 1749 aa35.15■■■■□ 3.22
TPM2-203ENST00000378292 CFAP53Q96M91 514 aa35.15■■■■□ 3.22
TPM2-203ENST00000378292 TMEM2Q9UHN6 1383 aa35.14■■■■□ 3.22
TPM2-203ENST00000378292 NGEFQ8N5V2 710 aa35.14■■■■□ 3.22
TPM2-203ENST00000378292 SLFN5Q08AF3 891 aa35.12■■■■□ 3.21
TPM2-203ENST00000378292 CABP1Q9NZU7 370 aa35.12■■■■□ 3.21
TPM2-203ENST00000378292 HDGFL2Q7Z4V5 671 aaPredicted RBP35.11■■■■□ 3.21
TPM2-203ENST00000378292 RBM19Q9Y4C8 960 aaKnown RBP35.11■■■■□ 3.21
TPM2-203ENST00000378292 EXOC6Q8TAG9 804 aa35.1■■■■□ 3.21
TPM2-203ENST00000378292 GGNBP2Q9H3C7 697 aa35.1■■■■□ 3.21
TPM2-203ENST00000378292 FYB1O15117 783 aa35.08■■■■□ 3.21
TPM2-203ENST00000378292 TRMT2AQ8IZ69 625 aaKnown RBP35.08■■■■□ 3.21
TPM2-203ENST00000378292 MED14O60244 1454 aa35.07■■■■□ 3.2
TPM2-203ENST00000378292 PLIN1O60240 522 aa35.06■■■■□ 3.2
TPM2-203ENST00000378292 NLRP1Q9C000 1473 aa35.06■■■■□ 3.2
TPM2-203ENST00000378292 TXNDC2Q86VQ3 553 aa35.06■■■■□ 3.2
TPM2-203ENST00000378292 ANKRD26Q9UPS8 1709 aa35.06■■■■□ 3.2
TPM2-203ENST00000378292 CEBPAP49715 358 aaPredicted RBP35.05■■■■□ 3.2
TPM2-203ENST00000378292 RUNDC1Q96C34 613 aa35.05■■■■□ 3.2
TPM2-203ENST00000378292 KNDC1Q76NI1 1749 aa35.04■■■■□ 3.2
TPM2-203ENST00000378292 SPINK5Q9NQ38 1064 aaPredicted RBP35.03■■■■□ 3.2
TPM2-203ENST00000378292 TECPR2O15040 1411 aa35.03■■■■□ 3.2
TPM2-203ENST00000378292 FAM135BQ49AJ0 1406 aa35.02■■■■□ 3.2
TPM2-203ENST00000378292 E9PSI1 815 aa35.01■■■■□ 3.2
TPM2-203ENST00000378292 SIRT1Q96EB6 747 aa35.01■■■■□ 3.2
TPM2-203ENST00000378292 ATP7BP35670 1465 aa35.01■■■■□ 3.19
TPM2-203ENST00000378292 WASLO00401 505 aaPredicted RBP35■■■■□ 3.19
TPM2-203ENST00000378292 WWC1Q8IX03 1113 aa34.99■■■■□ 3.19
TPM2-203ENST00000378292 DMRT2Q9Y5R5 561 aa34.98■■■■□ 3.19
TPM2-203ENST00000378292 CPS1P31327 1500 aa34.98■■■■□ 3.19
TPM2-203ENST00000378292 IQSEC2Q5JU85 1478 aa34.98■■■■□ 3.19
TPM2-203ENST00000378292 NKTRP30414 1462 aaKnown RBP34.97■■■■□ 3.19
TPM2-203ENST00000378292 C3P01024 1663 aa34.97■■■■□ 3.19
TPM2-203ENST00000378292 ADAMTS13Q76LX8 1427 aa34.96■■■■□ 3.19
TPM2-203ENST00000378292 KIF20BQ96Q89 1820 aa34.96■■■■□ 3.19
TPM2-203ENST00000378292 TCP11L2Q8N4U5 519 aa34.96■■■■□ 3.19
TPM2-203ENST00000378292 TRHP20396 242 aaPredicted RBP34.96■■■■□ 3.19
TPM2-203ENST00000378292 LTKP29376 864 aa34.95■■■■□ 3.19
TPM2-203ENST00000378292 PLEKHG1Q9ULL1 1385 aa34.94■■■■□ 3.18
TPM2-203ENST00000378292 U2AF1L5P0DN76 240 aaPredicted RBP34.94■■■■□ 3.18
TPM2-203ENST00000378292 U2AF1Q01081 240 aaKnown RBP eCLIP34.94■■■■□ 3.18
TPM2-203ENST00000378292 NEUROD2Q15784 382 aa34.93■■■■□ 3.18
TPM2-203ENST00000378292 RRP7AQ9Y3A4 280 aaKnown RBP34.92■■■■□ 3.18
TPM2-203ENST00000378292 FER1L4A9Z1Z3 1794 aa34.92■■■■□ 3.18
TPM2-203ENST00000378292 PPIP5K1Q6PFW1 1433 aa34.91■■■■□ 3.18
TPM2-203ENST00000378292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.91■■■■□ 3.18
TPM2-203ENST00000378292 COL3A1P02461 1466 aaPredicted RBP34.9■■■■□ 3.18
TPM2-203ENST00000378292 CRBNQ96SW2 442 aa34.9■■■■□ 3.18
TPM2-203ENST00000378292 PHF23Q9BUL5 403 aaPredicted RBP34.89■■■■□ 3.18
TPM2-203ENST00000378292 CPSF1Q10570 1443 aaKnown RBP34.89■■■■□ 3.18
TPM2-203ENST00000378292 ROBO2Q9HCK4 1378 aa34.88■■■■□ 3.17
TPM2-203ENST00000378292 C20orf194Q5TEA3 1177 aa34.88■■■■□ 3.17
TPM2-203ENST00000378292 NUDT16Q96DE0 195 aaKnown RBP34.88■■■■□ 3.17
TPM2-203ENST00000378292 PLPPR3Q6T4P5 718 aa34.87■■■■□ 3.17
TPM2-203ENST00000378292 EID1Q9Y6B2 187 aa34.86■■■■□ 3.17
TPM2-203ENST00000378292 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.85■■■■□ 3.17
TPM2-203ENST00000378292 CCDC27Q2M243 656 aa34.84■■■■□ 3.17
TPM2-203ENST00000378292 EDC4Q6P2E9 1401 aaKnown RBP34.84■■■■□ 3.17
TPM2-203ENST00000378292 CCDC61Q9Y6R9 512 aa34.84■■■■□ 3.17
TPM2-203ENST00000378292 U2SURPO15042 1029 aaKnown RBP34.83■■■■□ 3.17
TPM2-203ENST00000378292 SLIT1O75093 1534 aa34.82■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms