RNA–Protein interactions for RNA: ENST00000377999.5

CHD5-202, Transcript of chromodomain helicase DNA binding protein 5, humanhuman

TSL 2

Gene CHD5, Length 3,044 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5-202ENST00000377999 PTPRMP28827 1452 aa17.42■□□□□ 0.38
CHD5-202ENST00000377999 POLR3AO14802 1390 aaPredicted RBP17.41■□□□□ 0.38
CHD5-202ENST00000377999 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
CHD5-202ENST00000377999 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
CHD5-202ENST00000377999 APAF1O14727 1248 aa17.41■□□□□ 0.38
CHD5-202ENST00000377999 MLECQ14165 292 aa17.4■□□□□ 0.38
CHD5-202ENST00000377999 KIF13AQ9H1H9 1805 aa17.4■□□□□ 0.38
CHD5-202ENST00000377999 USP32Q8NFA0 1604 aa17.4■□□□□ 0.38
CHD5-202ENST00000377999 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.38
CHD5-202ENST00000377999 ANKRD36BQ8N2N9 1353 aa17.39■□□□□ 0.37
CHD5-202ENST00000377999 GOLGA2Q08379 1002 aa17.39■□□□□ 0.37
CHD5-202ENST00000377999 SHPRHQ149N8 1683 aa17.39■□□□□ 0.37
CHD5-202ENST00000377999 YTHDC2Q9H6S0 1430 aaKnown RBP17.39■□□□□ 0.37
CHD5-202ENST00000377999 ALKQ9UM73 1620 aa17.39■□□□□ 0.37
CHD5-202ENST00000377999 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
CHD5-202ENST00000377999 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
CHD5-202ENST00000377999 SLFN5Q08AF3 891 aa17.37■□□□□ 0.37
CHD5-202ENST00000377999 SPATA31D1Q6ZQQ2 1576 aa17.37■□□□□ 0.37
CHD5-202ENST00000377999 CGNL1Q0VF96 1302 aa17.37■□□□□ 0.37
CHD5-202ENST00000377999 TRMT2AQ8IZ69 625 aaKnown RBP17.37■□□□□ 0.37
CHD5-202ENST00000377999 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
CHD5-202ENST00000377999 A2ML1A8K2U0 1454 aa17.36■□□□□ 0.37
CHD5-202ENST00000377999 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
CHD5-202ENST00000377999 MINK1Q8N4C8 1332 aaPredicted RBP17.35■□□□□ 0.37
CHD5-202ENST00000377999 C20orf194Q5TEA3 1177 aa17.35■□□□□ 0.37
CHD5-202ENST00000377999 A0A1W2PP64 1363 aa17.35■□□□□ 0.37
CHD5-202ENST00000377999 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
CHD5-202ENST00000377999 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
CHD5-202ENST00000377999 MTHFSP49914 203 aa17.34■□□□□ 0.37
CHD5-202ENST00000377999 CRBNQ96SW2 442 aa17.33■□□□□ 0.37
CHD5-202ENST00000377999 MSH5O43196 834 aa17.33■□□□□ 0.36
CHD5-202ENST00000377999 POGKQ9P215 609 aa17.32■□□□□ 0.36
CHD5-202ENST00000377999 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
CHD5-202ENST00000377999 FANCIQ9NVI1 1328 aa17.31■□□□□ 0.36
CHD5-202ENST00000377999 RIMS2Q9UQ26 1411 aa17.31■□□□□ 0.36
CHD5-202ENST00000377999 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
CHD5-202ENST00000377999 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
CHD5-202ENST00000377999 NSD2O96028 1365 aa17.29■□□□□ 0.36
CHD5-202ENST00000377999 ZMYM3Q14202 1370 aa17.29■□□□□ 0.36
CHD5-202ENST00000377999 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
CHD5-202ENST00000377999 WAPLQ7Z5K2 1190 aa17.28■□□□□ 0.36
CHD5-202ENST00000377999 WWC1Q8IX03 1113 aa17.28■□□□□ 0.36
CHD5-202ENST00000377999 CDK19Q9BWU1 502 aa17.28■□□□□ 0.36
CHD5-202ENST00000377999 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.36
CHD5-202ENST00000377999 GGNBP2Q9H3C7 697 aa17.27■□□□□ 0.36
CHD5-202ENST00000377999 NKTRP30414 1462 aaKnown RBP17.27■□□□□ 0.36
CHD5-202ENST00000377999 IQSEC2Q5JU85 1478 aa17.27■□□□□ 0.35
CHD5-202ENST00000377999 E9PSI1 815 aa17.26■□□□□ 0.35
CHD5-202ENST00000377999 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
CHD5-202ENST00000377999 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
CHD5-202ENST00000377999 NLRP1Q9C000 1473 aa17.26■□□□□ 0.35
CHD5-202ENST00000377999 FYB1O15117 783 aa17.26■□□□□ 0.35
CHD5-202ENST00000377999 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
CHD5-202ENST00000377999 NEUROD2Q15784 382 aa17.25■□□□□ 0.35
CHD5-202ENST00000377999 TCP11L2Q8N4U5 519 aa17.25■□□□□ 0.35
CHD5-202ENST00000377999 NGEFQ8N5V2 710 aa17.25■□□□□ 0.35
CHD5-202ENST00000377999 CABP1Q9NZU7 370 aa17.24■□□□□ 0.35
CHD5-202ENST00000377999 BCAR3O75815 825 aa17.24■□□□□ 0.35
CHD5-202ENST00000377999 DLC1Q96QB1 1528 aa17.24■□□□□ 0.35
CHD5-202ENST00000377999 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
CHD5-202ENST00000377999 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
CHD5-202ENST00000377999 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
CHD5-202ENST00000377999 METP08581 1390 aa17.23■□□□□ 0.35
CHD5-202ENST00000377999 ANP32EQ9BTT0 268 aa17.23■□□□□ 0.35
CHD5-202ENST00000377999 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
CHD5-202ENST00000377999 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
CHD5-202ENST00000377999 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
CHD5-202ENST00000377999 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
CHD5-202ENST00000377999 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
CHD5-202ENST00000377999 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.34
CHD5-202ENST00000377999 MED14O60244 1454 aa17.19■□□□□ 0.34
CHD5-202ENST00000377999 HDGFL2Q7Z4V5 671 aaPredicted RBP17.18■□□□□ 0.34
CHD5-202ENST00000377999 TNRQ92752 1358 aa17.17■□□□□ 0.34
CHD5-202ENST00000377999 KDM2BQ8NHM5 1336 aa17.17■□□□□ 0.34
CHD5-202ENST00000377999 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
CHD5-202ENST00000377999 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
CHD5-202ENST00000377999 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
CHD5-202ENST00000377999 PLEKHF1Q96S99 279 aa17.16■□□□□ 0.34
CHD5-202ENST00000377999 ADGRB2O60241 1585 aa17.16■□□□□ 0.34
CHD5-202ENST00000377999 FBLN1P23142 703 aa17.16■□□□□ 0.34
CHD5-202ENST00000377999 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
CHD5-202ENST00000377999 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
CHD5-202ENST00000377999 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
CHD5-202ENST00000377999 KIF20BQ96Q89 1820 aa17.15■□□□□ 0.34
CHD5-202ENST00000377999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHD5-202ENST00000377999 UBR1Q8IWV7 1749 aa17.14■□□□□ 0.33
CHD5-202ENST00000377999 WASLO00401 505 aaPredicted RBP17.14■□□□□ 0.33
CHD5-202ENST00000377999 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
CHD5-202ENST00000377999 ATP7BP35670 1465 aa17.13■□□□□ 0.33
CHD5-202ENST00000377999 NCKAP5LQ9HCH0 1330 aa17.13■□□□□ 0.33
CHD5-202ENST00000377999 TMEM2Q9UHN6 1383 aa17.13■□□□□ 0.33
CHD5-202ENST00000377999 PNPLA6Q8IY17 1366 aa17.13■□□□□ 0.33
CHD5-202ENST00000377999 CPSF1Q10570 1443 aaKnown RBP17.11■□□□□ 0.33
CHD5-202ENST00000377999 CEBPAP49715 358 aaPredicted RBP17.11■□□□□ 0.33
CHD5-202ENST00000377999 TECPR2O15040 1411 aa17.11■□□□□ 0.33
CHD5-202ENST00000377999 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
CHD5-202ENST00000377999 PPIP5K1Q6PFW1 1433 aa17.11■□□□□ 0.33
CHD5-202ENST00000377999 RARSP54136 660 aaKnown RBP17.1■□□□□ 0.33
CHD5-202ENST00000377999 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
CHD5-202ENST00000377999 PDE4AP27815 886 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms