RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ANTXR1Q9H6X2 564 aa23.02■■□□□ 1.28
GNE-201ENST00000377902 DEPDC5O75140 1603 aa23.02■■□□□ 1.28
GNE-201ENST00000377902 SHPRHQ149N8 1683 aa23.02■■□□□ 1.28
GNE-201ENST00000377902 KIAA1210Q9ULL0 1709 aa23.02■■□□□ 1.28
GNE-201ENST00000377902 PMFBP1Q8TBY8 1022 aa23.02■■□□□ 1.28
GNE-201ENST00000377902 ARXQ96QS3 562 aa23.02■■□□□ 1.28
GNE-201ENST00000377902 NINLQ9Y2I6 1382 aa23.02■■□□□ 1.28
GNE-201ENST00000377902 TBC1D2Q9BYX2 928 aa23.01■■□□□ 1.27
GNE-201ENST00000377902 TBC1D32Q96NH3 1257 aa23■■□□□ 1.27
GNE-201ENST00000377902 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
GNE-201ENST00000377902 EIF5BO60841 1220 aaKnown RBP22.98■■□□□ 1.27
GNE-201ENST00000377902 NOS1P29475 1434 aa22.98■■□□□ 1.27
GNE-201ENST00000377902 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
GNE-201ENST00000377902 MYOM2P54296 1465 aa22.97■■□□□ 1.27
GNE-201ENST00000377902 ATP7AQ04656 1500 aa22.97■■□□□ 1.27
GNE-201ENST00000377902 UPF2Q9HAU5 1272 aaKnown RBP22.96■■□□□ 1.27
GNE-201ENST00000377902 VWDEQ8N2E2 1590 aa22.96■■□□□ 1.27
GNE-201ENST00000377902 IQSEC2Q5JU85 1478 aa22.96■■□□□ 1.27
GNE-201ENST00000377902 MROH2AA6NES4 1674 aa22.96■■□□□ 1.27
GNE-201ENST00000377902 WDR63Q8IWG1 891 aa22.96■■□□□ 1.27
GNE-201ENST00000377902 TSR2Q969E8 191 aaKnown RBP22.96■■□□□ 1.27
GNE-201ENST00000377902 NUTM2DQ5VT03 806 aaPredicted RBP22.95■■□□□ 1.26
GNE-201ENST00000377902 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
GNE-201ENST00000377902 RWDD1Q9H446 243 aaPredicted RBP22.95■■□□□ 1.26
GNE-201ENST00000377902 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
GNE-201ENST00000377902 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
GNE-201ENST00000377902 KIF1BO60333 1816 aa22.92■■□□□ 1.26
GNE-201ENST00000377902 MROH1Q8NDA8 1641 aa22.92■■□□□ 1.26
GNE-201ENST00000377902 MVPQ14764 893 aaKnown RBP22.92■■□□□ 1.26
GNE-201ENST00000377902 FANCAO15360 1455 aa22.92■■□□□ 1.26
GNE-201ENST00000377902 FAM43AQ8N2R8 423 aa22.92■■□□□ 1.26
GNE-201ENST00000377902 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
GNE-201ENST00000377902 SBNO2Q9Y2G9 1366 aa22.91■■□□□ 1.26
GNE-201ENST00000377902 GZF1Q9H116 711 aaPredicted RBP22.91■■□□□ 1.26
GNE-201ENST00000377902 MFAP1P55081 439 aaKnown RBP22.9■■□□□ 1.26
GNE-201ENST00000377902 FTSJ3Q8IY81 847 aaKnown RBP22.9■■□□□ 1.26
GNE-201ENST00000377902 ZNF518AQ6AHZ1 1483 aa22.9■■□□□ 1.26
GNE-201ENST00000377902 INO80Q9ULG1 1556 aaPredicted RBP22.89■■□□□ 1.25
GNE-201ENST00000377902 IFT172Q9UG01 1749 aa22.88■■□□□ 1.25
GNE-201ENST00000377902 ZKSCAN2Q63HK3 967 aa22.88■■□□□ 1.25
GNE-201ENST00000377902 DZIP1LQ8IYY4 767 aaKnown RBP22.88■■□□□ 1.25
GNE-201ENST00000377902 CFAP53Q96M91 514 aa22.88■■□□□ 1.25
GNE-201ENST00000377902 MYH16Q9H6N6 1097 aa22.88■■□□□ 1.25
GNE-201ENST00000377902 MYO3AQ8NEV4 1616 aa22.88■■□□□ 1.25
GNE-201ENST00000377902 NRXN1Q9ULB1 1477 aa22.88■■□□□ 1.25
GNE-201ENST00000377902 SAFB2Q14151 953 aaKnown RBP eCLIP22.88■■□□□ 1.25
GNE-201ENST00000377902 C14orf93Q9H972 538 aaKnown RBP22.88■■□□□ 1.25
GNE-201ENST00000377902 CCDC27Q2M243 656 aa22.87■■□□□ 1.25
GNE-201ENST00000377902 RRAGDQ9NQL2 400 aaPredicted RBP22.87■■□□□ 1.25
GNE-201ENST00000377902 UHRF1BP1LA0JNW5 1464 aa22.86■■□□□ 1.25
GNE-201ENST00000377902 EXOSC9Q06265 439 aaKnown RBP22.86■■□□□ 1.25
GNE-201ENST00000377902 AAMPQ13685 434 aa22.86■■□□□ 1.25
GNE-201ENST00000377902 SMC4Q9NTJ3 1288 aa22.86■■□□□ 1.25
GNE-201ENST00000377902 ADGRL1O94910 1474 aa22.86■■□□□ 1.25
GNE-201ENST00000377902 PPRC1Q5VV67 1664 aaKnown RBP22.86■■□□□ 1.25
GNE-201ENST00000377902 NEURL4Q96JN8 1562 aa22.85■■□□□ 1.25
GNE-201ENST00000377902 EFCAB6Q5THR3 1501 aa22.85■■□□□ 1.25
GNE-201ENST00000377902 C22orf23Q9BZE7 217 aa22.85■■□□□ 1.25
GNE-201ENST00000377902 CABP2Q9NPB3 220 aa22.85■■□□□ 1.25
GNE-201ENST00000377902 TRIM27P14373 513 aa22.85■■□□□ 1.25
GNE-201ENST00000377902 QRICH2Q9H0J4 1663 aa22.84■■□□□ 1.25
GNE-201ENST00000377902 U2SURPO15042 1029 aaKnown RBP22.84■■□□□ 1.25
GNE-201ENST00000377902 ITPRIPQ8IWB1 547 aa22.84■■□□□ 1.25
GNE-201ENST00000377902 GGT6Q6P531 493 aa22.83■■□□□ 1.25
GNE-201ENST00000377902 SSH1Q8WYL5 1049 aa22.83■■□□□ 1.24
GNE-201ENST00000377902 MCM4P33991 863 aa22.82■■□□□ 1.24
GNE-201ENST00000377902 PANK2Q9BZ23 570 aa22.82■■□□□ 1.24
GNE-201ENST00000377902 XRCC6P12956 609 aaKnown RBP eCLIP22.81■■□□□ 1.24
GNE-201ENST00000377902 ARAP3Q8WWN8 1544 aa22.81■■□□□ 1.24
GNE-201ENST00000377902 NOB1Q9ULX3 412 aaKnown RBP22.8■■□□□ 1.24
GNE-201ENST00000377902 ADGRB1O14514 1584 aa22.8■■□□□ 1.24
GNE-201ENST00000377902 GGNBP2Q9H3C7 697 aa22.79■■□□□ 1.24
GNE-201ENST00000377902 TRIM35Q9UPQ4 493 aa22.79■■□□□ 1.24
GNE-201ENST00000377902 ADGRB3O60242 1522 aa22.79■■□□□ 1.24
GNE-201ENST00000377902 L1TD1Q5T7N2 865 aaKnown RBP22.79■■□□□ 1.24
GNE-201ENST00000377902 ABCA9Q8IUA7 1624 aa22.79■■□□□ 1.24
GNE-201ENST00000377902 ZC3H13Q5T200 1668 aaKnown RBP22.78■■□□□ 1.24
GNE-201ENST00000377902 SETBP1Q9Y6X0 1596 aa22.78■■□□□ 1.24
GNE-201ENST00000377902 ZMYM3Q14202 1370 aa22.78■■□□□ 1.24
GNE-201ENST00000377902 CD109Q6YHK3 1445 aa22.78■■□□□ 1.24
GNE-201ENST00000377902 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.24
GNE-201ENST00000377902 PLEKHF1Q96S99 279 aa22.77■■□□□ 1.24
GNE-201ENST00000377902 TMEM57Q8N5G2 664 aa22.77■■□□□ 1.24
GNE-201ENST00000377902 NPATQ14207 1427 aa22.76■■□□□ 1.23
GNE-201ENST00000377902 ATF7IPQ6VMQ6 1270 aa22.76■■□□□ 1.23
GNE-201ENST00000377902 GOLGA6L3A6NEY3 463 aa22.75■■□□□ 1.23
GNE-201ENST00000377902 EVC2Q86UK5 1308 aa22.75■■□□□ 1.23
GNE-201ENST00000377902 HDAC1Q13547 482 aaPredicted RBP22.74■■□□□ 1.23
GNE-201ENST00000377902 CHMP5Q9NZZ3 219 aa22.74■■□□□ 1.23
GNE-201ENST00000377902 STK26Q9P289 416 aa22.74■■□□□ 1.23
GNE-201ENST00000377902 ANKRD36BQ8N2N9 1353 aa22.74■■□□□ 1.23
GNE-201ENST00000377902 KIDINS220Q9ULH0 1771 aa22.73■■□□□ 1.23
GNE-201ENST00000377902 TRAK2O60296 914 aa22.73■■□□□ 1.23
GNE-201ENST00000377902 RSPH6AQ9H0K4 717 aa22.73■■□□□ 1.23
GNE-201ENST00000377902 FSD2A1L4K1 749 aa22.73■■□□□ 1.23
GNE-201ENST00000377902 DDX19BQ9UMR2 479 aa22.73■■□□□ 1.23
GNE-201ENST00000377902 TULP4Q9NRJ4 1543 aa22.72■■□□□ 1.23
GNE-201ENST00000377902 PPLO60437 1756 aa22.72■■□□□ 1.23
GNE-201ENST00000377902 LNPKQ9C0E8 428 aa22.72■■□□□ 1.23
GNE-201ENST00000377902 RIPK4P57078 832 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms