RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 CLTCQ00610 1675 aaKnown RBP16.6■□□□□ 0.25
CEACAM1-205ENST00000377806 NLRP13Q86W25 1043 aa16.59■□□□□ 0.25
CEACAM1-205ENST00000377806 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
CEACAM1-205ENST00000377806 C3P01024 1663 aa16.57■□□□□ 0.24
CEACAM1-205ENST00000377806 FKBP8Q14318 412 aa16.57■□□□□ 0.24
CEACAM1-205ENST00000377806 CEBPAP49715 358 aaPredicted RBP16.56■□□□□ 0.24
CEACAM1-205ENST00000377806 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
CEACAM1-205ENST00000377806 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
CEACAM1-205ENST00000377806 SPATA31D1Q6ZQQ2 1576 aa16.55■□□□□ 0.24
CEACAM1-205ENST00000377806 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
CEACAM1-205ENST00000377806 MYO5BQ9ULV0 1848 aa16.55■□□□□ 0.24
CEACAM1-205ENST00000377806 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
CEACAM1-205ENST00000377806 FBXO31Q5XUX0 539 aaPredicted RBP16.54■□□□□ 0.24
CEACAM1-205ENST00000377806 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
CEACAM1-205ENST00000377806 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
CEACAM1-205ENST00000377806 ASXL1Q8IXJ9 1541 aa16.54■□□□□ 0.24
CEACAM1-205ENST00000377806 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
CEACAM1-205ENST00000377806 INSRP06213 1382 aa16.53■□□□□ 0.24
CEACAM1-205ENST00000377806 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
CEACAM1-205ENST00000377806 ARHGEF28Q8N1W1 1705 aaKnown RBP16.52■□□□□ 0.23
CEACAM1-205ENST00000377806 CDK11BP21127 795 aaKnown RBP16.51■□□□□ 0.23
CEACAM1-205ENST00000377806 TMEM132EQ6IEE7 984 aa16.51■□□□□ 0.23
CEACAM1-205ENST00000377806 NAP1L5Q96NT1 182 aaPredicted RBP16.51■□□□□ 0.23
CEACAM1-205ENST00000377806 TRAK1Q9UPV9 953 aa16.51■□□□□ 0.23
CEACAM1-205ENST00000377806 A0A0U1RQG5 324 aaPredicted RBP16.5■□□□□ 0.23
CEACAM1-205ENST00000377806 KNSTRNQ9Y448 316 aa16.5■□□□□ 0.23
CEACAM1-205ENST00000377806 NUTM2DQ5VT03 806 aaPredicted RBP16.49■□□□□ 0.23
CEACAM1-205ENST00000377806 ESF1Q9H501 851 aaKnown RBP16.49■□□□□ 0.23
CEACAM1-205ENST00000377806 BLMP54132 1417 aaPredicted RBP16.47■□□□□ 0.23
CEACAM1-205ENST00000377806 A2ML1A8K2U0 1454 aa16.47■□□□□ 0.23
CEACAM1-205ENST00000377806 ZMYM3Q14202 1370 aa16.47■□□□□ 0.23
CEACAM1-205ENST00000377806 PPP2R1AP30153 589 aa16.46■□□□□ 0.23
CEACAM1-205ENST00000377806 CARD14Q9BXL6 1004 aa16.46■□□□□ 0.23
CEACAM1-205ENST00000377806 TULP4Q9NRJ4 1543 aa16.46■□□□□ 0.23
CEACAM1-205ENST00000377806 PUS7Q96PZ0 661 aaKnown RBP16.45■□□□□ 0.22
CEACAM1-205ENST00000377806 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.45■□□□□ 0.22
CEACAM1-205ENST00000377806 TPRNQ4KMQ1 711 aa16.44■□□□□ 0.22
CEACAM1-205ENST00000377806 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
CEACAM1-205ENST00000377806 ALKQ9UM73 1620 aa16.43■□□□□ 0.22
CEACAM1-205ENST00000377806 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
CEACAM1-205ENST00000377806 HMGB1P09429 215 aaKnown RBP16.42■□□□□ 0.22
CEACAM1-205ENST00000377806 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
CEACAM1-205ENST00000377806 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
CEACAM1-205ENST00000377806 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
CEACAM1-205ENST00000377806 RNF123Q5XPI4 1314 aa16.4■□□□□ 0.22
CEACAM1-205ENST00000377806 YTHDC2Q9H6S0 1430 aaKnown RBP16.4■□□□□ 0.22
CEACAM1-205ENST00000377806 SETD1AO15047 1707 aaKnown RBP16.4■□□□□ 0.22
CEACAM1-205ENST00000377806 SETD1BQ9UPS6 1966 aaKnown RBP16.39■□□□□ 0.21
CEACAM1-205ENST00000377806 RIMS2Q9UQ26 1411 aa16.39■□□□□ 0.21
CEACAM1-205ENST00000377806 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
CEACAM1-205ENST00000377806 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
CEACAM1-205ENST00000377806 HSPA2P54652 639 aa16.38■□□□□ 0.21
CEACAM1-205ENST00000377806 SLC12A5Q9H2X9 1139 aa16.38■□□□□ 0.21
CEACAM1-205ENST00000377806 NSD3Q9BZ95 1437 aa16.38■□□□□ 0.21
CEACAM1-205ENST00000377806 SENP3-EIF4A1A0A087X0R7 540 aa16.37■□□□□ 0.21
CEACAM1-205ENST00000377806 RBM19Q9Y4C8 960 aaKnown RBP16.36■□□□□ 0.21
CEACAM1-205ENST00000377806 NRXN3Q9Y4C0 1643 aa16.36■□□□□ 0.21
CEACAM1-205ENST00000377806 DLC1Q96QB1 1528 aa16.36■□□□□ 0.21
CEACAM1-205ENST00000377806 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
CEACAM1-205ENST00000377806 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
CEACAM1-205ENST00000377806 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
CEACAM1-205ENST00000377806 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
CEACAM1-205ENST00000377806 KCNA4P22459 653 aa16.34■□□□□ 0.21
CEACAM1-205ENST00000377806 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
CEACAM1-205ENST00000377806 STK26Q9P289 416 aa16.33■□□□□ 0.21
CEACAM1-205ENST00000377806 TNRQ92752 1358 aa16.33■□□□□ 0.2
CEACAM1-205ENST00000377806 NINLQ9Y2I6 1382 aa16.33■□□□□ 0.2
CEACAM1-205ENST00000377806 ZNF142P52746 1687 aaPredicted RBP16.32■□□□□ 0.2
CEACAM1-205ENST00000377806 PRAM1Q96QH2 718 aa16.31■□□□□ 0.2
CEACAM1-205ENST00000377806 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
CEACAM1-205ENST00000377806 CEP170BQ9Y4F5 1589 aaPredicted RBP16.31■□□□□ 0.2
CEACAM1-205ENST00000377806 POLR3AO14802 1390 aaPredicted RBP16.31■□□□□ 0.2
CEACAM1-205ENST00000377806 UBR1Q8IWV7 1749 aa16.3■□□□□ 0.2
CEACAM1-205ENST00000377806 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
CEACAM1-205ENST00000377806 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
CEACAM1-205ENST00000377806 SAFB2Q14151 953 aaKnown RBP eCLIP16.29■□□□□ 0.2
CEACAM1-205ENST00000377806 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
CEACAM1-205ENST00000377806 NSD2O96028 1365 aa16.29■□□□□ 0.2
CEACAM1-205ENST00000377806 ATAD2Q6PL18 1390 aa16.29■□□□□ 0.2
CEACAM1-205ENST00000377806 WDR43Q15061 677 aaKnown RBP eCLIP16.28■□□□□ 0.2
CEACAM1-205ENST00000377806 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
CEACAM1-205ENST00000377806 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.28■□□□□ 0.2
CEACAM1-205ENST00000377806 IPO4Q8TEX9 1081 aaKnown RBP16.28■□□□□ 0.2
CEACAM1-205ENST00000377806 PPP4R2Q9NY27 417 aa16.28■□□□□ 0.2
CEACAM1-205ENST00000377806 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.2
CEACAM1-205ENST00000377806 ZNF521Q96K83 1311 aa16.27■□□□□ 0.2
CEACAM1-205ENST00000377806 STRCQ7RTU9 1775 aa16.27■□□□□ 0.19
CEACAM1-205ENST00000377806 A0A1W2PP64 1363 aa16.27■□□□□ 0.19
CEACAM1-205ENST00000377806 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.19
CEACAM1-205ENST00000377806 MINK1Q8N4C8 1332 aaPredicted RBP16.26■□□□□ 0.19
CEACAM1-205ENST00000377806 CDCA7LQ96GN5 454 aa16.26■□□□□ 0.19
CEACAM1-205ENST00000377806 SHPRHQ149N8 1683 aa16.26■□□□□ 0.19
CEACAM1-205ENST00000377806 METP08581 1390 aa16.26■□□□□ 0.19
CEACAM1-205ENST00000377806 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
CEACAM1-205ENST00000377806 KNDC1Q76NI1 1749 aa16.26■□□□□ 0.19
CEACAM1-205ENST00000377806 ARID3AQ99856 593 aa16.26■□□□□ 0.19
CEACAM1-205ENST00000377806 POGKQ9P215 609 aa16.26■□□□□ 0.19
CEACAM1-205ENST00000377806 MORC1Q86VD1 984 aa16.25■□□□□ 0.19
CEACAM1-205ENST00000377806 TECPR2O15040 1411 aa16.25■□□□□ 0.19
CEACAM1-205ENST00000377806 NLRP1Q9C000 1473 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms