RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 NUP160Q12769 1436 aa23.95■■□□□ 1.42
GPC5-201ENST00000377067 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.94■■□□□ 1.42
GPC5-201ENST00000377067 SMC5Q8IY18 1101 aa23.94■■□□□ 1.42
GPC5-201ENST00000377067 NGEFQ8N5V2 710 aa23.94■■□□□ 1.42
GPC5-201ENST00000377067 SYNMO15061 1565 aa23.93■■□□□ 1.42
GPC5-201ENST00000377067 FTSJ3Q8IY81 847 aaKnown RBP23.93■■□□□ 1.42
GPC5-201ENST00000377067 TNNT2P45379 298 aaPredicted RBP23.93■■□□□ 1.42
GPC5-201ENST00000377067 ANP32BQ92688 251 aaKnown RBP23.93■■□□□ 1.42
GPC5-201ENST00000377067 TCP11L2Q8N4U5 519 aa23.92■■□□□ 1.42
GPC5-201ENST00000377067 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
GPC5-201ENST00000377067 NPC1L1Q9UHC9 1359 aa23.91■■□□□ 1.42
GPC5-201ENST00000377067 CD2BP2O95400 341 aaKnown RBP23.91■■□□□ 1.42
GPC5-201ENST00000377067 SSFA2P28290 1259 aa23.91■■□□□ 1.42
GPC5-201ENST00000377067 CIZ1Q9ULV3 898 aaPredicted RBP23.91■■□□□ 1.42
GPC5-201ENST00000377067 SNX21Q969T3 373 aa23.9■■□□□ 1.42
GPC5-201ENST00000377067 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
GPC5-201ENST00000377067 DDX49Q9Y6V7 483 aaKnown RBP23.88■■□□□ 1.41
GPC5-201ENST00000377067 A0A0U1RQG5 324 aaPredicted RBP23.88■■□□□ 1.41
GPC5-201ENST00000377067 RBM25P49756 843 aaKnown RBP23.88■■□□□ 1.41
GPC5-201ENST00000377067 XPCQ01831 940 aaPredicted RBP23.88■■□□□ 1.41
GPC5-201ENST00000377067 DZIP1LQ8IYY4 767 aaKnown RBP23.88■■□□□ 1.41
GPC5-201ENST00000377067 RNF17Q9BXT8 1623 aaKnown RBP23.87■■□□□ 1.41
GPC5-201ENST00000377067 ZKSCAN2Q63HK3 967 aa23.87■■□□□ 1.41
GPC5-201ENST00000377067 MAGI1Q96QZ7 1491 aaPredicted RBP23.86■■□□□ 1.41
GPC5-201ENST00000377067 UQCRHLA0A096LP55 91 aa23.85■■□□□ 1.41
GPC5-201ENST00000377067 UQCRHP07919 91 aa23.85■■□□□ 1.41
GPC5-201ENST00000377067 RUNDC1Q96C34 613 aa23.85■■□□□ 1.41
GPC5-201ENST00000377067 MRC2Q9UBG0 1479 aa23.85■■□□□ 1.41
GPC5-201ENST00000377067 RBM42Q9BTD8 480 aaKnown RBP23.85■■□□□ 1.41
GPC5-201ENST00000377067 ITPRIPQ8IWB1 547 aa23.85■■□□□ 1.41
GPC5-201ENST00000377067 NCLP19338 710 aaKnown RBP23.83■■□□□ 1.41
GPC5-201ENST00000377067 LNPKQ9C0E8 428 aa23.83■■□□□ 1.41
GPC5-201ENST00000377067 MYOM1P52179 1685 aa23.83■■□□□ 1.41
GPC5-201ENST00000377067 PTMSP20962 102 aa23.82■■□□□ 1.4
GPC5-201ENST00000377067 PRDM10Q9NQV6 1147 aa23.82■■□□□ 1.4
GPC5-201ENST00000377067 KIF2CQ99661 725 aa23.82■■□□□ 1.4
GPC5-201ENST00000377067 SCAF11Q99590 1463 aaKnown RBP23.82■■□□□ 1.4
GPC5-201ENST00000377067 GOLGA6L22H0YM25 854 aa23.82■■□□□ 1.4
GPC5-201ENST00000377067 TERF1P54274 439 aa23.82■■□□□ 1.4
GPC5-201ENST00000377067 GAS2L2Q8NHY3 880 aa23.82■■□□□ 1.4
GPC5-201ENST00000377067 HDAC1Q13547 482 aaPredicted RBP23.81■■□□□ 1.4
GPC5-201ENST00000377067 WDR63Q8IWG1 891 aa23.81■■□□□ 1.4
GPC5-201ENST00000377067 MAP7D2Q96T17 732 aa23.81■■□□□ 1.4
GPC5-201ENST00000377067 KLHL40Q2TBA0 621 aa23.8■■□□□ 1.4
GPC5-201ENST00000377067 POLR3AO14802 1390 aaPredicted RBP23.8■■□□□ 1.4
GPC5-201ENST00000377067 TSR2Q969E8 191 aaKnown RBP23.8■■□□□ 1.4
GPC5-201ENST00000377067 SMC4Q9NTJ3 1288 aa23.8■■□□□ 1.4
GPC5-201ENST00000377067 ARHGEF5Q12774 1597 aa23.8■■□□□ 1.4
GPC5-201ENST00000377067 IQGAP1P46940 1657 aa23.79■■□□□ 1.4
GPC5-201ENST00000377067 BAG4O95429 457 aaKnown RBP23.79■■□□□ 1.4
GPC5-201ENST00000377067 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.79■■□□□ 1.4
GPC5-201ENST00000377067 K7ELQ4 463 aaPredicted RBP23.79■■□□□ 1.4
GPC5-201ENST00000377067 TRIM27P14373 513 aa23.79■■□□□ 1.4
GPC5-201ENST00000377067 CAVIN1Q6NZI2 390 aaKnown RBP23.79■■□□□ 1.4
GPC5-201ENST00000377067 PHF23Q9BUL5 403 aaPredicted RBP23.79■■□□□ 1.4
GPC5-201ENST00000377067 RBSNQ9H1K0 784 aa23.77■■□□□ 1.4
GPC5-201ENST00000377067 ZHX1Q9UKY1 873 aaPredicted RBP23.77■■□□□ 1.4
GPC5-201ENST00000377067 NOL7Q9UMY1 257 aaKnown RBP23.77■■□□□ 1.4
GPC5-201ENST00000377067 MCTP1Q6DN14 999 aa23.76■■□□□ 1.39
GPC5-201ENST00000377067 ATP10BO94823 1461 aa23.76■■□□□ 1.39
GPC5-201ENST00000377067 MORC1Q86VD1 984 aa23.76■■□□□ 1.39
GPC5-201ENST00000377067 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
GPC5-201ENST00000377067 UNC13BO14795 1591 aa23.74■■□□□ 1.39
GPC5-201ENST00000377067 SCAPERQ9BY12 1400 aa23.74■■□□□ 1.39
GPC5-201ENST00000377067 MADDQ8WXG6 1647 aa23.74■■□□□ 1.39
GPC5-201ENST00000377067 ZNF500O60304 480 aaPredicted RBP23.74■■□□□ 1.39
GPC5-201ENST00000377067 DDX19BQ9UMR2 479 aa23.74■■□□□ 1.39
GPC5-201ENST00000377067 SAMD9LQ8IVG5 1584 aa23.74■■□□□ 1.39
GPC5-201ENST00000377067 ZSCAN23Q3MJ62 389 aa23.73■■□□□ 1.39
GPC5-201ENST00000377067 ZBTB7CA1YPR0 619 aa23.73■■□□□ 1.39
GPC5-201ENST00000377067 IQSEC2Q5JU85 1478 aa23.72■■□□□ 1.39
GPC5-201ENST00000377067 EXOSC9Q06265 439 aaKnown RBP23.72■■□□□ 1.39
GPC5-201ENST00000377067 TMEM57Q8N5G2 664 aa23.72■■□□□ 1.39
GPC5-201ENST00000377067 IBTKQ9P2D0 1353 aaPredicted RBP23.72■■□□□ 1.39
GPC5-201ENST00000377067 ZNF445P59923 1031 aa23.72■■□□□ 1.39
GPC5-201ENST00000377067 FBLN2P98095 1184 aa23.72■■□□□ 1.39
GPC5-201ENST00000377067 SMAP1Q8IYB5 467 aaPredicted RBP23.72■■□□□ 1.39
GPC5-201ENST00000377067 SSH1Q8WYL5 1049 aa23.72■■□□□ 1.39
GPC5-201ENST00000377067 PRIM1P49642 420 aaKnown RBP23.71■■□□□ 1.39
GPC5-201ENST00000377067 NUCB1Q02818 461 aa23.71■■□□□ 1.39
GPC5-201ENST00000377067 HS1BP3Q53T59 392 aa23.7■■□□□ 1.38
GPC5-201ENST00000377067 NOB1Q9ULX3 412 aaKnown RBP23.7■■□□□ 1.38
GPC5-201ENST00000377067 RBM27Q9P2N5 1060 aaKnown RBP23.7■■□□□ 1.38
GPC5-201ENST00000377067 KDM5AP29375 1690 aaKnown RBP23.69■■□□□ 1.38
GPC5-201ENST00000377067 ATF7IPQ6VMQ6 1270 aa23.69■■□□□ 1.38
GPC5-201ENST00000377067 CHD1LQ86WJ1 897 aa23.69■■□□□ 1.38
GPC5-201ENST00000377067 ATP10AO60312 1499 aa23.69■■□□□ 1.38
GPC5-201ENST00000377067 PDLIM2Q96JY6 352 aa23.69■■□□□ 1.38
GPC5-201ENST00000377067 ZKSCAN5Q9Y2L8 839 aa23.69■■□□□ 1.38
GPC5-201ENST00000377067 IQGAP3Q86VI3 1631 aa23.69■■□□□ 1.38
GPC5-201ENST00000377067 AK9Q5TCS8 1911 aa23.69■■□□□ 1.38
GPC5-201ENST00000377067 MTHFSP49914 203 aa23.68■■□□□ 1.38
GPC5-201ENST00000377067 RSPH4AQ5TD94 716 aa23.68■■□□□ 1.38
GPC5-201ENST00000377067 JPH4Q96JJ6 628 aa23.68■■□□□ 1.38
GPC5-201ENST00000377067 ABCA8O94911 1581 aa23.68■■□□□ 1.38
GPC5-201ENST00000377067 SYCP2Q9BX26 1530 aa23.68■■□□□ 1.38
GPC5-201ENST00000377067 DYNC1I1O14576 645 aa23.67■■□□□ 1.38
GPC5-201ENST00000377067 ERVK-7P63135 1459 aa23.67■■□□□ 1.38
GPC5-201ENST00000377067 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
GPC5-201ENST00000377067 TBC1D9Q6ZT07 1266 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms