RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 ATF3P18847 181 aa32.47■■■□□ 2.79
YIF1A-202ENST00000376899 TRAK1Q9UPV9 953 aa32.47■■■□□ 2.79
YIF1A-202ENST00000376899 PIP4K2BP78356 416 aa32.46■■■□□ 2.79
YIF1A-202ENST00000376899 ROBO1Q9Y6N7 1651 aa32.44■■■□□ 2.78
YIF1A-202ENST00000376899 RALGAPBQ86X10 1494 aa32.44■■■□□ 2.78
YIF1A-202ENST00000376899 PRAM1Q96QH2 718 aa32.44■■■□□ 2.78
YIF1A-202ENST00000376899 GPRASP1Q5JY77 1395 aa32.44■■■□□ 2.78
YIF1A-202ENST00000376899 MST1RQ04912 1400 aa32.43■■■□□ 2.78
YIF1A-202ENST00000376899 SLAIN2Q9P270 581 aa32.43■■■□□ 2.78
YIF1A-202ENST00000376899 ADGRB2O60241 1585 aa32.42■■■□□ 2.78
YIF1A-202ENST00000376899 SCAF1Q9H7N4 1312 aaKnown RBP32.41■■■□□ 2.78
YIF1A-202ENST00000376899 ROCK2O75116 1388 aaKnown RBP32.41■■■□□ 2.78
YIF1A-202ENST00000376899 FMN2Q9NZ56 1722 aa32.38■■■□□ 2.77
YIF1A-202ENST00000376899 POGKQ9P215 609 aa32.38■■■□□ 2.77
YIF1A-202ENST00000376899 C1orf167Q5SNV9 1468 aa32.35■■■□□ 2.77
YIF1A-202ENST00000376899 SAFB2Q14151 953 aaKnown RBP eCLIP32.33■■■□□ 2.77
YIF1A-202ENST00000376899 QRICH2Q9H0J4 1663 aa32.29■■■□□ 2.76
YIF1A-202ENST00000376899 AHDC1Q5TGY3 1603 aaPredicted RBP32.27■■■□□ 2.76
YIF1A-202ENST00000376899 BRINP3Q76B58 766 aa32.27■■■□□ 2.76
YIF1A-202ENST00000376899 HSPA1LP34931 641 aa32.26■■■□□ 2.75
YIF1A-202ENST00000376899 MINK1Q8N4C8 1332 aaPredicted RBP32.26■■■□□ 2.75
YIF1A-202ENST00000376899 CENPJQ9HC77 1338 aaPredicted RBP32.26■■■□□ 2.75
YIF1A-202ENST00000376899 NHSL1Q5SYE7 1610 aa32.25■■■□□ 2.75
YIF1A-202ENST00000376899 EIF3AQ14152 1382 aaKnown RBP32.24■■■□□ 2.75
YIF1A-202ENST00000376899 CARD11Q9BXL7 1154 aa32.24■■■□□ 2.75
YIF1A-202ENST00000376899 PHLPP1O60346 1717 aa32.23■■■□□ 2.75
YIF1A-202ENST00000376899 USP32Q8NFA0 1604 aa32.22■■■□□ 2.75
YIF1A-202ENST00000376899 RGPD8O14715 1765 aaPredicted RBP32.22■■■□□ 2.75
YIF1A-202ENST00000376899 ANKARQ7Z5J8 1434 aa32.21■■■□□ 2.75
YIF1A-202ENST00000376899 HIRIP3Q9BW71 556 aaPredicted RBP32.21■■■□□ 2.75
YIF1A-202ENST00000376899 TULP4Q9NRJ4 1543 aa32.21■■■□□ 2.75
YIF1A-202ENST00000376899 WASLO00401 505 aaPredicted RBP32.19■■■□□ 2.74
YIF1A-202ENST00000376899 COL16A1Q07092 1604 aaPredicted RBP32.18■■■□□ 2.74
YIF1A-202ENST00000376899 KIF1AQ12756 1690 aa32.18■■■□□ 2.74
YIF1A-202ENST00000376899 ORAI2Q96SN7 254 aa32.17■■■□□ 2.74
YIF1A-202ENST00000376899 NUTM2FA1L443 756 aa32.15■■■□□ 2.74
YIF1A-202ENST00000376899 SBNO2Q9Y2G9 1366 aa32.14■■■□□ 2.74
YIF1A-202ENST00000376899 ESCO1Q5FWF5 840 aa32.12■■■□□ 2.73
YIF1A-202ENST00000376899 ITSN1Q15811 1721 aa32.12■■■□□ 2.73
YIF1A-202ENST00000376899 ATP7BP35670 1465 aa32.11■■■□□ 2.73
YIF1A-202ENST00000376899 PRR36Q9H6K5 1346 aa32.11■■■□□ 2.73
YIF1A-202ENST00000376899 TOPAZ1Q8N9V7 1692 aa32.09■■■□□ 2.73
YIF1A-202ENST00000376899 CDK19Q9BWU1 502 aa32.08■■■□□ 2.73
YIF1A-202ENST00000376899 USP47Q96K76 1375 aa32.05■■■□□ 2.72
YIF1A-202ENST00000376899 DDX17Q92841 729 aaKnown RBP32.04■■■□□ 2.72
YIF1A-202ENST00000376899 PHF8Q9UPP1 1060 aa32.04■■■□□ 2.72
YIF1A-202ENST00000376899 SOS2Q07890 1332 aaPredicted RBP32.03■■■□□ 2.72
YIF1A-202ENST00000376899 NPHP3Q7Z494 1330 aa32.03■■■□□ 2.72
YIF1A-202ENST00000376899 PXDNQ92626 1479 aa32.03■■■□□ 2.72
YIF1A-202ENST00000376899 NUDT16Q96DE0 195 aaKnown RBP32.02■■■□□ 2.72
YIF1A-202ENST00000376899 SHPRHQ149N8 1683 aa32.02■■■□□ 2.72
YIF1A-202ENST00000376899 EVC2Q86UK5 1308 aa32.01■■■□□ 2.72
YIF1A-202ENST00000376899 JCADQ9P266 1359 aa31.99■■■□□ 2.71
YIF1A-202ENST00000376899 FOXO3O43524 673 aa31.99■■■□□ 2.71
YIF1A-202ENST00000376899 ST20-MTHFSA0A0A6YYL1 179 aa31.98■■■□□ 2.71
YIF1A-202ENST00000376899 SRPK2P78362 688 aaKnown RBP31.97■■■□□ 2.71
YIF1A-202ENST00000376899 TESK2Q96S53 571 aa31.96■■■□□ 2.71
YIF1A-202ENST00000376899 CCDC61Q9Y6R9 512 aa31.96■■■□□ 2.71
YIF1A-202ENST00000376899 CABP2Q9NPB3 220 aa31.95■■■□□ 2.71
YIF1A-202ENST00000376899 PMFBP1Q8TBY8 1022 aa31.94■■■□□ 2.7
YIF1A-202ENST00000376899 LRRC59Q96AG4 307 aaKnown RBP31.94■■■□□ 2.7
YIF1A-202ENST00000376899 TRPM3Q9HCF6 1732 aaPredicted RBP31.91■■■□□ 2.7
YIF1A-202ENST00000376899 PPIP5K1Q6PFW1 1433 aa31.91■■■□□ 2.7
YIF1A-202ENST00000376899 PLEKHG3A1L390 1219 aa31.9■■■□□ 2.7
YIF1A-202ENST00000376899 SLC24A1O60721 1099 aa31.9■■■□□ 2.7
YIF1A-202ENST00000376899 POLR3AO14802 1390 aaPredicted RBP31.9■■■□□ 2.7
YIF1A-202ENST00000376899 ATAD2Q6PL18 1390 aa31.89■■■□□ 2.7
YIF1A-202ENST00000376899 PNPLA6Q8IY17 1366 aa31.89■■■□□ 2.7
YIF1A-202ENST00000376899 MED1Q15648 1581 aaPredicted RBP31.89■■■□□ 2.7
YIF1A-202ENST00000376899 XPCQ01831 940 aaPredicted RBP31.88■■■□□ 2.69
YIF1A-202ENST00000376899 KRT28Q7Z3Y7 464 aa31.88■■■□□ 2.69
YIF1A-202ENST00000376899 COL22A1Q8NFW1 1626 aaPredicted RBP31.88■■■□□ 2.69
YIF1A-202ENST00000376899 SBNO1A3KN83 1393 aa31.87■■■□□ 2.69
YIF1A-202ENST00000376899 PUS7Q96PZ0 661 aaKnown RBP31.86■■■□□ 2.69
YIF1A-202ENST00000376899 SPATA31A6Q5VVP1 1343 aa31.85■■■□□ 2.69
YIF1A-202ENST00000376899 SPATA31A3Q5VYP0 1347 aa31.84■■■□□ 2.69
YIF1A-202ENST00000376899 PSME1Q06323 249 aa31.84■■■□□ 2.69
YIF1A-202ENST00000376899 NGDNQ8NEJ9 315 aaKnown RBP31.84■■■□□ 2.69
YIF1A-202ENST00000376899 TNS3Q68CZ2 1445 aa31.83■■■□□ 2.69
YIF1A-202ENST00000376899 ALS2Q96Q42 1657 aa31.83■■■□□ 2.69
YIF1A-202ENST00000376899 ACEP12821 1306 aa31.82■■■□□ 2.68
YIF1A-202ENST00000376899 EIF4G2P78344 907 aaKnown RBP eCLIP31.81■■■□□ 2.68
YIF1A-202ENST00000376899 DISP3Q9P2K9 1392 aa31.81■■■□□ 2.68
YIF1A-202ENST00000376899 CABP1Q9NZU7 370 aa31.8■■■□□ 2.68
YIF1A-202ENST00000376899 AKAP12Q02952 1782 aa31.8■■■□□ 2.68
YIF1A-202ENST00000376899 LRP6O75581 1613 aa31.78■■■□□ 2.68
YIF1A-202ENST00000376899 TMF1P82094 1093 aa31.78■■■□□ 2.68
YIF1A-202ENST00000376899 HSPA5P11021 654 aaKnown RBP31.76■■■□□ 2.67
YIF1A-202ENST00000376899 BRD4O60885 1362 aaPredicted RBP31.75■■■□□ 2.67
YIF1A-202ENST00000376899 ARHGEF10O15013 1369 aa31.74■■■□□ 2.67
YIF1A-202ENST00000376899 USP6P35125 1406 aa31.74■■■□□ 2.67
YIF1A-202ENST00000376899 MON2Q7Z3U7 1717 aa31.73■■■□□ 2.67
YIF1A-202ENST00000376899 CPSF1Q10570 1443 aaKnown RBP31.73■■■□□ 2.67
YIF1A-202ENST00000376899 NINLQ9Y2I6 1382 aa31.72■■■□□ 2.67
YIF1A-202ENST00000376899 ABCA3Q99758 1704 aa31.72■■■□□ 2.67
YIF1A-202ENST00000376899 CD163L1Q9NR16 1453 aa31.72■■■□□ 2.67
YIF1A-202ENST00000376899 NRKQ7Z2Y5 1582 aa31.7■■■□□ 2.67
YIF1A-202ENST00000376899 SSH2Q76I76 1423 aa31.69■■■□□ 2.66
YIF1A-202ENST00000376899 CDCA8Q53HL2 280 aa31.69■■■□□ 2.66
YIF1A-202ENST00000376899 CRYBG1Q9Y4K1 1723 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms