RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 NLRP1Q9C000 1473 aa17.02■□□□□ 0.32
CLCN6-206ENST00000376496 PPP2R1AP30153 589 aa17.02■□□□□ 0.32
CLCN6-206ENST00000376496 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.32
CLCN6-206ENST00000376496 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.31
CLCN6-206ENST00000376496 HDGFP51858 240 aaKnown RBP17.02■□□□□ 0.31
CLCN6-206ENST00000376496 LRPPRCP42704 1394 aaKnown RBP17.02■□□□□ 0.31
CLCN6-206ENST00000376496 CDK19Q9BWU1 502 aa17.01■□□□□ 0.31
CLCN6-206ENST00000376496 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
CLCN6-206ENST00000376496 ADAMTS13Q76LX8 1427 aa16.99■□□□□ 0.31
CLCN6-206ENST00000376496 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
CLCN6-206ENST00000376496 ABCC11Q96J66 1382 aa16.97■□□□□ 0.31
CLCN6-206ENST00000376496 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
CLCN6-206ENST00000376496 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
CLCN6-206ENST00000376496 THEMISQ8N1K5 641 aaPredicted RBP16.96■□□□□ 0.3
CLCN6-206ENST00000376496 CABP1Q9NZU7 370 aa16.95■□□□□ 0.3
CLCN6-206ENST00000376496 PLEKHG1Q9ULL1 1385 aa16.95■□□□□ 0.3
CLCN6-206ENST00000376496 A0A1W2PP64 1363 aa16.94■□□□□ 0.3
CLCN6-206ENST00000376496 ROBO2Q9HCK4 1378 aa16.94■□□□□ 0.3
CLCN6-206ENST00000376496 NUTM2FA1L443 756 aa16.93■□□□□ 0.3
CLCN6-206ENST00000376496 MORC1Q86VD1 984 aa16.93■□□□□ 0.3
CLCN6-206ENST00000376496 DLC1Q96QB1 1528 aa16.93■□□□□ 0.3
CLCN6-206ENST00000376496 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
CLCN6-206ENST00000376496 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
CLCN6-206ENST00000376496 PTPRUQ92729 1446 aa16.92■□□□□ 0.3
CLCN6-206ENST00000376496 ARHGAP23Q9P227 1491 aa16.92■□□□□ 0.3
CLCN6-206ENST00000376496 ADAMTS8Q9UP79 889 aa16.92■□□□□ 0.3
CLCN6-206ENST00000376496 ADAMTSL3P82987 1691 aa16.92■□□□□ 0.3
CLCN6-206ENST00000376496 SUPT16HQ9Y5B9 1047 aaKnown RBP16.91■□□□□ 0.3
CLCN6-206ENST00000376496 SLIT1O75093 1534 aa16.91■□□□□ 0.3
CLCN6-206ENST00000376496 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
CLCN6-206ENST00000376496 CEP170BQ9Y4F5 1589 aaPredicted RBP16.91■□□□□ 0.3
CLCN6-206ENST00000376496 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
CLCN6-206ENST00000376496 FKBP8Q14318 412 aa16.9■□□□□ 0.3
CLCN6-206ENST00000376496 ATAD2Q6PL18 1390 aa16.9■□□□□ 0.3
CLCN6-206ENST00000376496 WASLO00401 505 aaPredicted RBP16.9■□□□□ 0.3
CLCN6-206ENST00000376496 CGNL1Q0VF96 1302 aa16.9■□□□□ 0.3
CLCN6-206ENST00000376496 AMOTL2Q9Y2J4 779 aa16.9■□□□□ 0.3
CLCN6-206ENST00000376496 CD163L1Q9NR16 1453 aa16.89■□□□□ 0.29
CLCN6-206ENST00000376496 IRX6P78412 446 aaPredicted RBP16.89■□□□□ 0.29
CLCN6-206ENST00000376496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLCN6-206ENST00000376496 MED14O60244 1454 aa16.87■□□□□ 0.29
CLCN6-206ENST00000376496 WDR43Q15061 677 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLCN6-206ENST00000376496 TERF2IPQ9NYB0 399 aa16.87■□□□□ 0.29
CLCN6-206ENST00000376496 TECPR2O15040 1411 aa16.87■□□□□ 0.29
CLCN6-206ENST00000376496 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
CLCN6-206ENST00000376496 CPS1P31327 1500 aa16.86■□□□□ 0.29
CLCN6-206ENST00000376496 NUDT16Q96DE0 195 aaKnown RBP16.86■□□□□ 0.29
CLCN6-206ENST00000376496 RBM33Q96EV2 1170 aaKnown RBP16.86■□□□□ 0.29
CLCN6-206ENST00000376496 KNDC1Q76NI1 1749 aa16.85■□□□□ 0.29
CLCN6-206ENST00000376496 PRR36Q9H6K5 1346 aa16.85■□□□□ 0.29
CLCN6-206ENST00000376496 FAM135BQ49AJ0 1406 aa16.85■□□□□ 0.29
CLCN6-206ENST00000376496 HDGFL2Q7Z4V5 671 aaPredicted RBP16.85■□□□□ 0.29
CLCN6-206ENST00000376496 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
CLCN6-206ENST00000376496 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.84■□□□□ 0.29
CLCN6-206ENST00000376496 FBLN1P23142 703 aa16.84■□□□□ 0.29
CLCN6-206ENST00000376496 FYB1O15117 783 aa16.84■□□□□ 0.29
CLCN6-206ENST00000376496 MTHFSP49914 203 aa16.83■□□□□ 0.29
CLCN6-206ENST00000376496 PPIP5K1Q6PFW1 1433 aa16.83■□□□□ 0.29
CLCN6-206ENST00000376496 KCNA6P17658 529 aa16.83■□□□□ 0.28
CLCN6-206ENST00000376496 NINLQ9Y2I6 1382 aa16.82■□□□□ 0.28
CLCN6-206ENST00000376496 ANKLE2Q86XL3 938 aa16.82■□□□□ 0.28
CLCN6-206ENST00000376496 SIRT1Q96EB6 747 aa16.82■□□□□ 0.28
CLCN6-206ENST00000376496 CDCA7LQ96GN5 454 aa16.81■□□□□ 0.28
CLCN6-206ENST00000376496 ZRANB1Q9UGI0 708 aa16.81■□□□□ 0.28
CLCN6-206ENST00000376496 USP32Q8NFA0 1604 aa16.81■□□□□ 0.28
CLCN6-206ENST00000376496 BLMP54132 1417 aaPredicted RBP16.81■□□□□ 0.28
CLCN6-206ENST00000376496 NEFLP07196 543 aa16.8■□□□□ 0.28
CLCN6-206ENST00000376496 CCDC61Q9Y6R9 512 aa16.79■□□□□ 0.28
CLCN6-206ENST00000376496 NME9Q86XW9 330 aa16.78■□□□□ 0.28
CLCN6-206ENST00000376496 SETD1BQ9UPS6 1966 aaKnown RBP16.78■□□□□ 0.28
CLCN6-206ENST00000376496 NUDCQ9Y266 331 aa16.78■□□□□ 0.28
CLCN6-206ENST00000376496 ATP7BP35670 1465 aa16.77■□□□□ 0.28
CLCN6-206ENST00000376496 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
CLCN6-206ENST00000376496 PMFBP1Q8TBY8 1022 aa16.76■□□□□ 0.27
CLCN6-206ENST00000376496 ZNF142P52746 1687 aaPredicted RBP16.76■□□□□ 0.27
CLCN6-206ENST00000376496 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
CLCN6-206ENST00000376496 NSD2O96028 1365 aa16.75■□□□□ 0.27
CLCN6-206ENST00000376496 APAF1O14727 1248 aa16.75■□□□□ 0.27
CLCN6-206ENST00000376496 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
CLCN6-206ENST00000376496 CPSF1Q10570 1443 aaKnown RBP16.74■□□□□ 0.27
CLCN6-206ENST00000376496 ACEP12821 1306 aa16.73■□□□□ 0.27
CLCN6-206ENST00000376496 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
CLCN6-206ENST00000376496 DIP2AQ14689 1571 aa16.72■□□□□ 0.27
CLCN6-206ENST00000376496 XRN1Q8IZH2 1706 aaKnown RBP16.72■□□□□ 0.27
CLCN6-206ENST00000376496 PTCH1Q13635 1447 aa16.72■□□□□ 0.27
CLCN6-206ENST00000376496 KIF20BQ96Q89 1820 aa16.72■□□□□ 0.27
CLCN6-206ENST00000376496 NKTRP30414 1462 aaKnown RBP16.72■□□□□ 0.27
CLCN6-206ENST00000376496 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
CLCN6-206ENST00000376496 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
CLCN6-206ENST00000376496 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
CLCN6-206ENST00000376496 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
CLCN6-206ENST00000376496 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
CLCN6-206ENST00000376496 RGPD8O14715 1765 aaPredicted RBP16.7■□□□□ 0.26
CLCN6-206ENST00000376496 HSPA2P54652 639 aa16.7■□□□□ 0.26
CLCN6-206ENST00000376496 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
CLCN6-206ENST00000376496 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
CLCN6-206ENST00000376496 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
CLCN6-206ENST00000376496 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLCN6-206ENST00000376496 NPHP4O75161 1426 aaPredicted RBP16.69■□□□□ 0.26
CLCN6-206ENST00000376496 ANKRD26Q9UPS8 1709 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms