RNA–Protein interactions for RNA: ENST00000376227.3

CCDC22-201, Transcript of coiled-coil domain containing 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC22, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC22-201ENST00000376227 WDR63Q8IWG1 891 aa19.54■□□□□ 0.72
CCDC22-201ENST00000376227 PUS7Q96PZ0 661 aaKnown RBP19.53■□□□□ 0.72
CCDC22-201ENST00000376227 IGHDP01880 384 aa19.53■□□□□ 0.72
CCDC22-201ENST00000376227 SLC4A3P48751 1232 aa19.53■□□□□ 0.72
CCDC22-201ENST00000376227 USP32Q8NFA0 1604 aa19.53■□□□□ 0.72
CCDC22-201ENST00000376227 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
CCDC22-201ENST00000376227 PMFBP1Q8TBY8 1022 aa19.52■□□□□ 0.72
CCDC22-201ENST00000376227 SLC12A5Q9H2X9 1139 aa19.52■□□□□ 0.72
CCDC22-201ENST00000376227 QRICH2Q9H0J4 1663 aa19.52■□□□□ 0.72
CCDC22-201ENST00000376227 NPATQ14207 1427 aa19.52■□□□□ 0.72
CCDC22-201ENST00000376227 TCP11L2Q8N4U5 519 aa19.52■□□□□ 0.71
CCDC22-201ENST00000376227 COG6Q9Y2V7 657 aa19.52■□□□□ 0.71
CCDC22-201ENST00000376227 CCDC27Q2M243 656 aa19.51■□□□□ 0.71
CCDC22-201ENST00000376227 SHPRHQ149N8 1683 aa19.51■□□□□ 0.71
CCDC22-201ENST00000376227 ZC3H13Q5T200 1668 aaKnown RBP19.51■□□□□ 0.71
CCDC22-201ENST00000376227 ADGRB1O14514 1584 aa19.51■□□□□ 0.71
CCDC22-201ENST00000376227 IQSEC2Q5JU85 1478 aa19.51■□□□□ 0.71
CCDC22-201ENST00000376227 NSD2O96028 1365 aa19.51■□□□□ 0.71
CCDC22-201ENST00000376227 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
CCDC22-201ENST00000376227 FRAT1Q92837 279 aaPredicted RBP19.51■□□□□ 0.71
CCDC22-201ENST00000376227 RARSP54136 660 aaKnown RBP19.5■□□□□ 0.71
CCDC22-201ENST00000376227 NEUROD2Q15784 382 aa19.5■□□□□ 0.71
CCDC22-201ENST00000376227 PANK1Q8TE04 598 aa19.5■□□□□ 0.71
CCDC22-201ENST00000376227 PPLO60437 1756 aa19.5■□□□□ 0.71
CCDC22-201ENST00000376227 GSE1Q14687 1217 aa19.5■□□□□ 0.71
CCDC22-201ENST00000376227 PHF23Q9BUL5 403 aaPredicted RBP19.5■□□□□ 0.71
CCDC22-201ENST00000376227 CFAP74Q9C0B2 1584 aa19.49■□□□□ 0.71
CCDC22-201ENST00000376227 EVC2Q86UK5 1308 aa19.49■□□□□ 0.71
CCDC22-201ENST00000376227 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
CCDC22-201ENST00000376227 MTHFSP49914 203 aa19.48■□□□□ 0.71
CCDC22-201ENST00000376227 GGT6Q6P531 493 aa19.48■□□□□ 0.71
CCDC22-201ENST00000376227 MYH16Q9H6N6 1097 aa19.48■□□□□ 0.71
CCDC22-201ENST00000376227 MLH3Q9UHC1 1453 aa19.48■□□□□ 0.71
CCDC22-201ENST00000376227 POGZQ7Z3K3 1410 aa19.47■□□□□ 0.71
CCDC22-201ENST00000376227 RRP7AQ9Y3A4 280 aaKnown RBP19.47■□□□□ 0.71
CCDC22-201ENST00000376227 ZMYM3Q14202 1370 aa19.47■□□□□ 0.71
CCDC22-201ENST00000376227 ANKRD36BQ8N2N9 1353 aa19.46■□□□□ 0.71
CCDC22-201ENST00000376227 TMEM132EQ6IEE7 984 aa19.46■□□□□ 0.71
CCDC22-201ENST00000376227 VGFO15240 615 aaPredicted RBP19.45■□□□□ 0.7
CCDC22-201ENST00000376227 BECN1Q14457 450 aa19.45■□□□□ 0.7
CCDC22-201ENST00000376227 HECW2Q9P2P5 1572 aa19.44■□□□□ 0.7
CCDC22-201ENST00000376227 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
CCDC22-201ENST00000376227 UPF2Q9HAU5 1272 aaKnown RBP19.43■□□□□ 0.7
CCDC22-201ENST00000376227 FRMPD1Q5SYB0 1578 aa19.43■□□□□ 0.7
CCDC22-201ENST00000376227 CD109Q6YHK3 1445 aa19.43■□□□□ 0.7
CCDC22-201ENST00000376227 RWDD1Q9H446 243 aaPredicted RBP19.42■□□□□ 0.7
CCDC22-201ENST00000376227 ABCC3O15438 1527 aa19.42■□□□□ 0.7
CCDC22-201ENST00000376227 CT47B1P0C2W7 299 aaPredicted RBP19.42■□□□□ 0.7
CCDC22-201ENST00000376227 GLI2P10070 1586 aa19.41■□□□□ 0.7
CCDC22-201ENST00000376227 U2AF1L5P0DN76 240 aaPredicted RBP19.41■□□□□ 0.7
CCDC22-201ENST00000376227 U2AF1Q01081 240 aaKnown RBP eCLIP19.41■□□□□ 0.7
CCDC22-201ENST00000376227 USP19O94966 1318 aa19.39■□□□□ 0.7
CCDC22-201ENST00000376227 TULP4Q9NRJ4 1543 aa19.38■□□□□ 0.69
CCDC22-201ENST00000376227 RLBP1P12271 317 aa19.37■□□□□ 0.69
CCDC22-201ENST00000376227 ZKSCAN2Q63HK3 967 aa19.37■□□□□ 0.69
CCDC22-201ENST00000376227 PCDHB15Q9Y5E8 787 aa19.37■□□□□ 0.69
CCDC22-201ENST00000376227 CAMSAP1Q5T5Y3 1602 aa19.37■□□□□ 0.69
CCDC22-201ENST00000376227 FTSJ3Q8IY81 847 aaKnown RBP19.36■□□□□ 0.69
CCDC22-201ENST00000376227 IL27Q8NEV9 243 aa19.36■□□□□ 0.69
CCDC22-201ENST00000376227 BCL2L13Q9BXK5 485 aa19.36■□□□□ 0.69
CCDC22-201ENST00000376227 MVPQ14764 893 aaKnown RBP19.36■□□□□ 0.69
CCDC22-201ENST00000376227 ADGRB2O60241 1585 aa19.36■□□□□ 0.69
CCDC22-201ENST00000376227 ARHGEF28Q8N1W1 1705 aaKnown RBP19.35■□□□□ 0.69
CCDC22-201ENST00000376227 FRAT2O75474 233 aaPredicted RBP19.35■□□□□ 0.69
CCDC22-201ENST00000376227 NEXMIFQ5QGS0 1516 aa19.35■□□□□ 0.69
CCDC22-201ENST00000376227 PDZRN3Q9UPQ7 1066 aa19.35■□□□□ 0.69
CCDC22-201ENST00000376227 PIK3C2BO00750 1634 aa19.34■□□□□ 0.69
CCDC22-201ENST00000376227 ABCC11Q96J66 1382 aa19.34■□□□□ 0.69
CCDC22-201ENST00000376227 DZIP1LQ8IYY4 767 aaKnown RBP19.34■□□□□ 0.69
CCDC22-201ENST00000376227 CABP2Q9NPB3 220 aa19.34■□□□□ 0.69
CCDC22-201ENST00000376227 SEC24BO95487 1268 aa19.33■□□□□ 0.69
CCDC22-201ENST00000376227 ZFYVE9O95405 1425 aa19.33■□□□□ 0.68
CCDC22-201ENST00000376227 ARHGAP31Q2M1Z3 1444 aa19.32■□□□□ 0.68
CCDC22-201ENST00000376227 CFAP65Q6ZU64 1925 aaKnown RBP19.32■□□□□ 0.68
CCDC22-201ENST00000376227 TNNQ9UQP3 1299 aa19.31■□□□□ 0.68
CCDC22-201ENST00000376227 ATAD2Q6PL18 1390 aa19.31■□□□□ 0.68
CCDC22-201ENST00000376227 SRPK2P78362 688 aaKnown RBP19.31■□□□□ 0.68
CCDC22-201ENST00000376227 NUTM2DQ5VT03 806 aaPredicted RBP19.31■□□□□ 0.68
CCDC22-201ENST00000376227 PNNQ9H307 717 aaKnown RBP19.31■□□□□ 0.68
CCDC22-201ENST00000376227 SLC52A1Q9NWF4 448 aa19.31■□□□□ 0.68
CCDC22-201ENST00000376227 TERF2IPQ9NYB0 399 aa19.31■□□□□ 0.68
CCDC22-201ENST00000376227 NLRP1Q9C000 1473 aa19.31■□□□□ 0.68
CCDC22-201ENST00000376227 A0A1W2PP64 1363 aa19.3■□□□□ 0.68
CCDC22-201ENST00000376227 NEO1Q92859 1461 aa19.3■□□□□ 0.68
CCDC22-201ENST00000376227 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
CCDC22-201ENST00000376227 IL16Q14005 1332 aa19.3■□□□□ 0.68
CCDC22-201ENST00000376227 TBC1D32Q96NH3 1257 aa19.3■□□□□ 0.68
CCDC22-201ENST00000376227 SMC4Q9NTJ3 1288 aa19.3■□□□□ 0.68
CCDC22-201ENST00000376227 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
CCDC22-201ENST00000376227 TMPOP42166 694 aaKnown RBP19.28■□□□□ 0.68
CCDC22-201ENST00000376227 SIGLEC1Q9BZZ2 1709 aa19.28■□□□□ 0.68
CCDC22-201ENST00000376227 PLEKHF1Q96S99 279 aa19.28■□□□□ 0.68
CCDC22-201ENST00000376227 MED14O60244 1454 aa19.27■□□□□ 0.68
CCDC22-201ENST00000376227 SAFB2Q14151 953 aaKnown RBP eCLIP19.27■□□□□ 0.68
CCDC22-201ENST00000376227 EXOSC9Q06265 439 aaKnown RBP19.26■□□□□ 0.67
CCDC22-201ENST00000376227 IDI1Q13907 227 aa19.26■□□□□ 0.67
CCDC22-201ENST00000376227 TSR2Q969E8 191 aaKnown RBP19.26■□□□□ 0.67
CCDC22-201ENST00000376227 HDAC1Q13547 482 aaPredicted RBP19.25■□□□□ 0.67
CCDC22-201ENST00000376227 GGNBP2Q9H3C7 697 aa19.25■□□□□ 0.67
CCDC22-201ENST00000376227 STK26Q9P289 416 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms