RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 NINLQ9Y2I6 1382 aa24.86■■□□□ 1.57
PPP1R3F-202ENST00000376188 EXOC6Q8TAG9 804 aa24.86■■□□□ 1.57
PPP1R3F-202ENST00000376188 NSD2O96028 1365 aa24.85■■□□□ 1.57
PPP1R3F-202ENST00000376188 SHPRHQ149N8 1683 aa24.85■■□□□ 1.57
PPP1R3F-202ENST00000376188 DUSP27Q5VZP5 1158 aa24.84■■□□□ 1.57
PPP1R3F-202ENST00000376188 SPATA31D1Q6ZQQ2 1576 aa24.84■■□□□ 1.57
PPP1R3F-202ENST00000376188 FBXO31Q5XUX0 539 aaPredicted RBP24.84■■□□□ 1.57
PPP1R3F-202ENST00000376188 PTPRMP28827 1452 aa24.83■■□□□ 1.57
PPP1R3F-202ENST00000376188 KIF13AQ9H1H9 1805 aa24.83■■□□□ 1.56
PPP1R3F-202ENST00000376188 ARHGEF40Q8TER5 1519 aa24.82■■□□□ 1.56
PPP1R3F-202ENST00000376188 CCDC146Q8IYE0 955 aa24.82■■□□□ 1.56
PPP1R3F-202ENST00000376188 ALKQ9UM73 1620 aa24.81■■□□□ 1.56
PPP1R3F-202ENST00000376188 YTHDC2Q9H6S0 1430 aaKnown RBP24.81■■□□□ 1.56
PPP1R3F-202ENST00000376188 APAF1O14727 1248 aa24.8■■□□□ 1.56
PPP1R3F-202ENST00000376188 SLFN5Q08AF3 891 aa24.8■■□□□ 1.56
PPP1R3F-202ENST00000376188 STAG3Q9UJ98 1225 aa24.79■■□□□ 1.56
PPP1R3F-202ENST00000376188 STK26Q9P289 416 aa24.77■■□□□ 1.56
PPP1R3F-202ENST00000376188 ATAD2Q6PL18 1390 aa24.77■■□□□ 1.56
PPP1R3F-202ENST00000376188 TRMT2AQ8IZ69 625 aaKnown RBP24.77■■□□□ 1.56
PPP1R3F-202ENST00000376188 CABP2Q9NPB3 220 aa24.77■■□□□ 1.56
PPP1R3F-202ENST00000376188 A2ML1A8K2U0 1454 aa24.75■■□□□ 1.55
PPP1R3F-202ENST00000376188 PLIN1O60240 522 aa24.75■■□□□ 1.55
PPP1R3F-202ENST00000376188 SAFB2Q14151 953 aaKnown RBP eCLIP24.74■■□□□ 1.55
PPP1R3F-202ENST00000376188 NKTRP30414 1462 aaKnown RBP24.74■■□□□ 1.55
PPP1R3F-202ENST00000376188 E9PSI1 815 aa24.73■■□□□ 1.55
PPP1R3F-202ENST00000376188 CFAP53Q96M91 514 aa24.73■■□□□ 1.55
PPP1R3F-202ENST00000376188 ANKRD26Q9UPS8 1709 aa24.73■■□□□ 1.55
PPP1R3F-202ENST00000376188 ABCC11Q96J66 1382 aa24.73■■□□□ 1.55
PPP1R3F-202ENST00000376188 SRPK2P78362 688 aaKnown RBP24.73■■□□□ 1.55
PPP1R3F-202ENST00000376188 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.72■■□□□ 1.55
PPP1R3F-202ENST00000376188 PRAM1Q96QH2 718 aa24.72■■□□□ 1.55
PPP1R3F-202ENST00000376188 POGKQ9P215 609 aa24.72■■□□□ 1.55
PPP1R3F-202ENST00000376188 A0A1W2PP64 1363 aa24.72■■□□□ 1.55
PPP1R3F-202ENST00000376188 DLC1Q96QB1 1528 aa24.72■■□□□ 1.55
PPP1R3F-202ENST00000376188 TNNT2P45379 298 aaPredicted RBP24.72■■□□□ 1.55
PPP1R3F-202ENST00000376188 ANP32EQ9BTT0 268 aa24.72■■□□□ 1.55
PPP1R3F-202ENST00000376188 SETD1AO15047 1707 aaKnown RBP24.71■■□□□ 1.55
PPP1R3F-202ENST00000376188 CRBNQ96SW2 442 aa24.71■■□□□ 1.55
PPP1R3F-202ENST00000376188 MTHFSP49914 203 aa24.7■■□□□ 1.54
PPP1R3F-202ENST00000376188 RIMS2Q9UQ26 1411 aa24.69■■□□□ 1.54
PPP1R3F-202ENST00000376188 RUNDC1Q96C34 613 aa24.68■■□□□ 1.54
PPP1R3F-202ENST00000376188 TERF2IPQ9NYB0 399 aa24.68■■□□□ 1.54
PPP1R3F-202ENST00000376188 MINK1Q8N4C8 1332 aaPredicted RBP24.68■■□□□ 1.54
PPP1R3F-202ENST00000376188 IQSEC2Q5JU85 1478 aa24.68■■□□□ 1.54
PPP1R3F-202ENST00000376188 MED14O60244 1454 aa24.67■■□□□ 1.54
PPP1R3F-202ENST00000376188 SENP3Q9H4L4 574 aaPredicted RBP24.66■■□□□ 1.54
PPP1R3F-202ENST00000376188 MLECQ14165 292 aa24.65■■□□□ 1.54
PPP1R3F-202ENST00000376188 SPINK5Q9NQ38 1064 aaPredicted RBP24.65■■□□□ 1.54
PPP1R3F-202ENST00000376188 WWC1Q8IX03 1113 aa24.64■■□□□ 1.54
PPP1R3F-202ENST00000376188 CD163L1Q9NR16 1453 aa24.64■■□□□ 1.54
PPP1R3F-202ENST00000376188 TCERG1O14776 1098 aaKnown RBP24.63■■□□□ 1.53
PPP1R3F-202ENST00000376188 KIF20BQ96Q89 1820 aa24.63■■□□□ 1.53
PPP1R3F-202ENST00000376188 MSH5O43196 834 aa24.62■■□□□ 1.53
PPP1R3F-202ENST00000376188 C20orf194Q5TEA3 1177 aa24.62■■□□□ 1.53
PPP1R3F-202ENST00000376188 ESF1Q9H501 851 aaKnown RBP24.62■■□□□ 1.53
PPP1R3F-202ENST00000376188 NCBP3Q53F19 620 aaKnown RBP24.62■■□□□ 1.53
PPP1R3F-202ENST00000376188 NRXN3Q9Y4C0 1643 aa24.61■■□□□ 1.53
PPP1R3F-202ENST00000376188 ZMYM3Q14202 1370 aa24.6■■□□□ 1.53
PPP1R3F-202ENST00000376188 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.6■■□□□ 1.53
PPP1R3F-202ENST00000376188 HDGFL2Q7Z4V5 671 aaPredicted RBP24.6■■□□□ 1.53
PPP1R3F-202ENST00000376188 CDK19Q9BWU1 502 aa24.6■■□□□ 1.53
PPP1R3F-202ENST00000376188 NLRP1Q9C000 1473 aa24.59■■□□□ 1.53
PPP1R3F-202ENST00000376188 TCP11L2Q8N4U5 519 aa24.59■■□□□ 1.53
PPP1R3F-202ENST00000376188 PHF23Q9BUL5 403 aaPredicted RBP24.59■■□□□ 1.53
PPP1R3F-202ENST00000376188 DMRT2Q9Y5R5 561 aa24.59■■□□□ 1.53
PPP1R3F-202ENST00000376188 ADGRB2O60241 1585 aa24.58■■□□□ 1.53
PPP1R3F-202ENST00000376188 CCDC27Q2M243 656 aa24.58■■□□□ 1.53
PPP1R3F-202ENST00000376188 KNDC1Q76NI1 1749 aa24.56■■□□□ 1.52
PPP1R3F-202ENST00000376188 ATP7BP35670 1465 aa24.56■■□□□ 1.52
PPP1R3F-202ENST00000376188 MS4A1P11836 297 aa24.56■■□□□ 1.52
PPP1R3F-202ENST00000376188 WDR63Q8IWG1 891 aa24.56■■□□□ 1.52
PPP1R3F-202ENST00000376188 FYB1O15117 783 aa24.55■■□□□ 1.52
PPP1R3F-202ENST00000376188 GGNBP2Q9H3C7 697 aa24.55■■□□□ 1.52
PPP1R3F-202ENST00000376188 COL3A1P02461 1466 aaPredicted RBP24.55■■□□□ 1.52
PPP1R3F-202ENST00000376188 U2AF1L5P0DN76 240 aaPredicted RBP24.53■■□□□ 1.52
PPP1R3F-202ENST00000376188 HDGFP51858 240 aaKnown RBP24.53■■□□□ 1.52
PPP1R3F-202ENST00000376188 U2AF1Q01081 240 aaKnown RBP eCLIP24.53■■□□□ 1.52
PPP1R3F-202ENST00000376188 NEUROD2Q15784 382 aa24.52■■□□□ 1.52
PPP1R3F-202ENST00000376188 CABP1Q9NZU7 370 aa24.52■■□□□ 1.52
PPP1R3F-202ENST00000376188 RRP7AQ9Y3A4 280 aaKnown RBP24.52■■□□□ 1.52
PPP1R3F-202ENST00000376188 TNRQ92752 1358 aa24.51■■□□□ 1.51
PPP1R3F-202ENST00000376188 KDM2BQ8NHM5 1336 aa24.51■■□□□ 1.51
PPP1R3F-202ENST00000376188 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
PPP1R3F-202ENST00000376188 UBR1Q8IWV7 1749 aa24.5■■□□□ 1.51
PPP1R3F-202ENST00000376188 BCAR3O75815 825 aa24.5■■□□□ 1.51
PPP1R3F-202ENST00000376188 ERICH6Q7L0X2 663 aa24.5■■□□□ 1.51
PPP1R3F-202ENST00000376188 WAPLQ7Z5K2 1190 aa24.5■■□□□ 1.51
PPP1R3F-202ENST00000376188 TECPR2O15040 1411 aa24.48■■□□□ 1.51
PPP1R3F-202ENST00000376188 ANP32AP39687 249 aaKnown RBP24.48■■□□□ 1.51
PPP1R3F-202ENST00000376188 PDE3AQ14432 1141 aa24.47■■□□□ 1.51
PPP1R3F-202ENST00000376188 FAM135BQ49AJ0 1406 aa24.47■■□□□ 1.51
PPP1R3F-202ENST00000376188 METP08581 1390 aa24.46■■□□□ 1.51
PPP1R3F-202ENST00000376188 CPS1P31327 1500 aa24.46■■□□□ 1.51
PPP1R3F-202ENST00000376188 SIRT1Q96EB6 747 aa24.46■■□□□ 1.51
PPP1R3F-202ENST00000376188 PNPLA6Q8IY17 1366 aa24.45■■□□□ 1.51
PPP1R3F-202ENST00000376188 MYH16Q9H6N6 1097 aa24.45■■□□□ 1.5
PPP1R3F-202ENST00000376188 WASLO00401 505 aaPredicted RBP24.43■■□□□ 1.5
PPP1R3F-202ENST00000376188 U2SURPO15042 1029 aaKnown RBP24.43■■□□□ 1.5
PPP1R3F-202ENST00000376188 PDE4AP27815 886 aa24.43■■□□□ 1.5
PPP1R3F-202ENST00000376188 CDC42BPGQ6DT37 1551 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms