RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 SAFB2Q14151 953 aaKnown RBP eCLIP16.05■□□□□ 0.16
TNFSF13B-201ENST00000375887 MYO3AQ8NEV4 1616 aa16.05■□□□□ 0.16
TNFSF13B-201ENST00000375887 TNNQ9UQP3 1299 aa16.05■□□□□ 0.16
TNFSF13B-201ENST00000375887 ADGRB3O60242 1522 aa16.05■□□□□ 0.16
TNFSF13B-201ENST00000375887 MTHFSP49914 203 aa16.04■□□□□ 0.16
TNFSF13B-201ENST00000375887 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
TNFSF13B-201ENST00000375887 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
TNFSF13B-201ENST00000375887 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
TNFSF13B-201ENST00000375887 LMTK2Q8IWU2 1503 aa16.04■□□□□ 0.16
TNFSF13B-201ENST00000375887 CGNL1Q0VF96 1302 aa16.03■□□□□ 0.16
TNFSF13B-201ENST00000375887 RUNDC1Q96C34 613 aa16.03■□□□□ 0.16
TNFSF13B-201ENST00000375887 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
TNFSF13B-201ENST00000375887 BCL2L13Q9BXK5 485 aa16.03■□□□□ 0.16
TNFSF13B-201ENST00000375887 RLBP1P12271 317 aa16.03■□□□□ 0.16
TNFSF13B-201ENST00000375887 RARSP54136 660 aaKnown RBP16.03■□□□□ 0.16
TNFSF13B-201ENST00000375887 ADGRB1O14514 1584 aa16.03■□□□□ 0.16
TNFSF13B-201ENST00000375887 ZNF518AQ6AHZ1 1483 aa16.02■□□□□ 0.16
TNFSF13B-201ENST00000375887 USP19O94966 1318 aa16.02■□□□□ 0.15
TNFSF13B-201ENST00000375887 SHPRHQ149N8 1683 aa16.02■□□□□ 0.15
TNFSF13B-201ENST00000375887 SEC24BO95487 1268 aa16.02■□□□□ 0.15
TNFSF13B-201ENST00000375887 SETBP1Q9Y6X0 1596 aa16.01■□□□□ 0.15
TNFSF13B-201ENST00000375887 CANXP27824 592 aaKnown RBP16.01■□□□□ 0.15
TNFSF13B-201ENST00000375887 IL27Q8NEV9 243 aa16.01■□□□□ 0.15
TNFSF13B-201ENST00000375887 ANO8Q9HCE9 1232 aaPredicted RBP16.01■□□□□ 0.15
TNFSF13B-201ENST00000375887 DAXXQ9UER7 740 aaPredicted RBP16■□□□□ 0.15
TNFSF13B-201ENST00000375887 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
TNFSF13B-201ENST00000375887 IQSEC2Q5JU85 1478 aa15.99■□□□□ 0.15
TNFSF13B-201ENST00000375887 FRMPD1Q5SYB0 1578 aa15.99■□□□□ 0.15
TNFSF13B-201ENST00000375887 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
TNFSF13B-201ENST00000375887 QRICH2Q9H0J4 1663 aa15.98■□□□□ 0.15
TNFSF13B-201ENST00000375887 PPLO60437 1756 aa15.97■□□□□ 0.15
TNFSF13B-201ENST00000375887 WDR63Q8IWG1 891 aa15.97■□□□□ 0.15
TNFSF13B-201ENST00000375887 CABP2Q9NPB3 220 aa15.97■□□□□ 0.15
TNFSF13B-201ENST00000375887 RTN4Q9NQC3 1192 aaKnown RBP15.96■□□□□ 0.15
TNFSF13B-201ENST00000375887 ZC3H13Q5T200 1668 aaKnown RBP15.96■□□□□ 0.15
TNFSF13B-201ENST00000375887 NINLQ9Y2I6 1382 aa15.95■□□□□ 0.14
TNFSF13B-201ENST00000375887 POGZQ7Z3K3 1410 aa15.95■□□□□ 0.14
TNFSF13B-201ENST00000375887 STK26Q9P289 416 aa15.95■□□□□ 0.14
TNFSF13B-201ENST00000375887 RPGRIP1LQ68CZ1 1315 aa15.95■□□□□ 0.14
TNFSF13B-201ENST00000375887 FRAT2O75474 233 aaPredicted RBP15.94■□□□□ 0.14
TNFSF13B-201ENST00000375887 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
TNFSF13B-201ENST00000375887 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
TNFSF13B-201ENST00000375887 CD109Q6YHK3 1445 aa15.94■□□□□ 0.14
TNFSF13B-201ENST00000375887 RAPGEF3O95398 923 aa15.94■□□□□ 0.14
TNFSF13B-201ENST00000375887 GSE1Q14687 1217 aa15.94■□□□□ 0.14
TNFSF13B-201ENST00000375887 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
TNFSF13B-201ENST00000375887 CFAP53Q96M91 514 aa15.93■□□□□ 0.14
TNFSF13B-201ENST00000375887 EVC2Q86UK5 1308 aa15.93■□□□□ 0.14
TNFSF13B-201ENST00000375887 MAPK8IP3Q9UPT6 1336 aa15.93■□□□□ 0.14
TNFSF13B-201ENST00000375887 MLH3Q9UHC1 1453 aa15.93■□□□□ 0.14
TNFSF13B-201ENST00000375887 TULP4Q9NRJ4 1543 aa15.93■□□□□ 0.14
TNFSF13B-201ENST00000375887 ABCC3O15438 1527 aa15.92■□□□□ 0.14
TNFSF13B-201ENST00000375887 ANKRD36BQ8N2N9 1353 aa15.92■□□□□ 0.14
TNFSF13B-201ENST00000375887 TSR2Q969E8 191 aaKnown RBP15.91■□□□□ 0.14
TNFSF13B-201ENST00000375887 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
TNFSF13B-201ENST00000375887 NPM1P06748 294 aaKnown RBP eCLIP15.9■□□□□ 0.14
TNFSF13B-201ENST00000375887 IDI1Q13907 227 aa15.9■□□□□ 0.14
TNFSF13B-201ENST00000375887 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
TNFSF13B-201ENST00000375887 SIGLEC1Q9BZZ2 1709 aa15.9■□□□□ 0.14
TNFSF13B-201ENST00000375887 GLI2P10070 1586 aa15.9■□□□□ 0.14
TNFSF13B-201ENST00000375887 PMFBP1Q8TBY8 1022 aa15.89■□□□□ 0.13
TNFSF13B-201ENST00000375887 PUS7Q96PZ0 661 aaKnown RBP15.89■□□□□ 0.13
TNFSF13B-201ENST00000375887 GGNBP2Q9H3C7 697 aa15.89■□□□□ 0.13
TNFSF13B-201ENST00000375887 USP32Q8NFA0 1604 aa15.89■□□□□ 0.13
TNFSF13B-201ENST00000375887 NLRP1Q9C000 1473 aa15.89■□□□□ 0.13
TNFSF13B-201ENST00000375887 HECW2Q9P2P5 1572 aa15.89■□□□□ 0.13
TNFSF13B-201ENST00000375887 MYH16Q9H6N6 1097 aa15.88■□□□□ 0.13
TNFSF13B-201ENST00000375887 PLEKHF1Q96S99 279 aa15.88■□□□□ 0.13
TNFSF13B-201ENST00000375887 BRPF3Q9ULD4 1205 aa15.88■□□□□ 0.13
TNFSF13B-201ENST00000375887 A0A1W2PP64 1363 aa15.87■□□□□ 0.13
TNFSF13B-201ENST00000375887 NEXMIFQ5QGS0 1516 aa15.87■□□□□ 0.13
TNFSF13B-201ENST00000375887 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
TNFSF13B-201ENST00000375887 MVPQ14764 893 aaKnown RBP15.86■□□□□ 0.13
TNFSF13B-201ENST00000375887 TRIM35Q9UPQ4 493 aa15.86■□□□□ 0.13
TNFSF13B-201ENST00000375887 ARHGEF28Q8N1W1 1705 aaKnown RBP15.86■□□□□ 0.13
TNFSF13B-201ENST00000375887 VIRMAQ69YN4 1812 aaKnown RBP15.86■□□□□ 0.13
TNFSF13B-201ENST00000375887 FBLN1P23142 703 aa15.85■□□□□ 0.13
TNFSF13B-201ENST00000375887 SRPK2P78362 688 aaKnown RBP15.85■□□□□ 0.13
TNFSF13B-201ENST00000375887 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
TNFSF13B-201ENST00000375887 AAMPQ13685 434 aa15.85■□□□□ 0.13
TNFSF13B-201ENST00000375887 NSD2O96028 1365 aa15.85■□□□□ 0.13
TNFSF13B-201ENST00000375887 TMPOP42166 694 aaKnown RBP15.85■□□□□ 0.13
TNFSF13B-201ENST00000375887 FYB1O15117 783 aa15.84■□□□□ 0.13
TNFSF13B-201ENST00000375887 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
TNFSF13B-201ENST00000375887 ZKSCAN2Q63HK3 967 aa15.84■□□□□ 0.13
TNFSF13B-201ENST00000375887 RWDD1Q9H446 243 aaPredicted RBP15.84■□□□□ 0.13
TNFSF13B-201ENST00000375887 CAMSAP1Q5T5Y3 1602 aa15.84■□□□□ 0.13
TNFSF13B-201ENST00000375887 ABCC11Q96J66 1382 aa15.84■□□□□ 0.13
TNFSF13B-201ENST00000375887 DZIP1LQ8IYY4 767 aaKnown RBP15.84■□□□□ 0.13
TNFSF13B-201ENST00000375887 SSH1Q8WYL5 1049 aa15.83■□□□□ 0.13
TNFSF13B-201ENST00000375887 MINK1Q8N4C8 1332 aaPredicted RBP15.83■□□□□ 0.13
TNFSF13B-201ENST00000375887 PIK3C2BO00750 1634 aa15.83■□□□□ 0.12
TNFSF13B-201ENST00000375887 TRIM27P14373 513 aa15.83■□□□□ 0.12
TNFSF13B-201ENST00000375887 SLKQ9H2G2 1235 aaPredicted RBP15.83■□□□□ 0.12
TNFSF13B-201ENST00000375887 ADGRB2O60241 1585 aa15.82■□□□□ 0.12
TNFSF13B-201ENST00000375887 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
TNFSF13B-201ENST00000375887 FTSJ3Q8IY81 847 aaKnown RBP15.82■□□□□ 0.12
TNFSF13B-201ENST00000375887 SMC4Q9NTJ3 1288 aa15.82■□□□□ 0.12
TNFSF13B-201ENST00000375887 PRAM1Q96QH2 718 aa15.81■□□□□ 0.12
TNFSF13B-201ENST00000375887 COL3A1P02461 1466 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms