RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 NEXMIFQ5QGS0 1516 aa24.36■■□□□ 1.49
CLIC1-208ENST00000375784 TRPC5Q9UL62 973 aaPredicted RBP24.36■■□□□ 1.49
CLIC1-208ENST00000375784 FNBP4Q8N3X1 1017 aaPredicted RBP24.35■■□□□ 1.49
CLIC1-208ENST00000375784 ORAI2Q96SN7 254 aa24.35■■□□□ 1.49
CLIC1-208ENST00000375784 LAMC1P11047 1609 aa24.35■■□□□ 1.49
CLIC1-208ENST00000375784 PTCH1Q13635 1447 aa24.33■■□□□ 1.49
CLIC1-208ENST00000375784 SPATA31E1Q6ZUB1 1445 aa24.31■■□□□ 1.48
CLIC1-208ENST00000375784 ZRANB1Q9UGI0 708 aa24.31■■□□□ 1.48
CLIC1-208ENST00000375784 ANKRD30BQ9BXX2 1392 aa24.3■■□□□ 1.48
CLIC1-208ENST00000375784 ROBO2Q9HCK4 1378 aa24.3■■□□□ 1.48
CLIC1-208ENST00000375784 SRCAPQ6ZRS2 3230 aa24.29■■□□□ 1.48
CLIC1-208ENST00000375784 ATRNO75882 1429 aa24.29■■□□□ 1.48
CLIC1-208ENST00000375784 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
CLIC1-208ENST00000375784 PIAS4Q8N2W9 510 aaPredicted RBP24.27■■□□□ 1.48
CLIC1-208ENST00000375784 CCDC125Q86Z20 511 aa24.25■■□□□ 1.47
CLIC1-208ENST00000375784 ADGRF5Q8IZF2 1346 aa24.24■■□□□ 1.47
CLIC1-208ENST00000375784 PRAG1Q86YV5 1406 aa24.24■■□□□ 1.47
CLIC1-208ENST00000375784 COL22A1Q8NFW1 1626 aaPredicted RBP24.23■■□□□ 1.47
CLIC1-208ENST00000375784 MYOM2P54296 1465 aa24.22■■□□□ 1.47
CLIC1-208ENST00000375784 BCL9LQ86UU0 1499 aa24.22■■□□□ 1.47
CLIC1-208ENST00000375784 PPLO60437 1756 aa24.21■■□□□ 1.47
CLIC1-208ENST00000375784 NPHP3Q7Z494 1330 aa24.2■■□□□ 1.46
CLIC1-208ENST00000375784 ESCO1Q5FWF5 840 aa24.19■■□□□ 1.46
CLIC1-208ENST00000375784 GJD4Q96KN9 370 aaPredicted RBP24.18■■□□□ 1.46
CLIC1-208ENST00000375784 PXDNQ92626 1479 aa24.16■■□□□ 1.46
CLIC1-208ENST00000375784 STAC3Q96MF2 364 aa24.16■■□□□ 1.46
CLIC1-208ENST00000375784 FOXO3O43524 673 aa24.14■■□□□ 1.45
CLIC1-208ENST00000375784 XPCQ01831 940 aaPredicted RBP24.13■■□□□ 1.45
CLIC1-208ENST00000375784 DCAF11Q8TEB1 546 aa24.13■■□□□ 1.45
CLIC1-208ENST00000375784 CDC42BPGQ6DT37 1551 aa24.12■■□□□ 1.45
CLIC1-208ENST00000375784 PIK3C2GO75747 1445 aa24.11■■□□□ 1.45
CLIC1-208ENST00000375784 C14orf93Q9H972 538 aaKnown RBP24.11■■□□□ 1.45
CLIC1-208ENST00000375784 KDM2AQ9Y2K7 1162 aa24.11■■□□□ 1.45
CLIC1-208ENST00000375784 LRPPRCP42704 1394 aaKnown RBP24.11■■□□□ 1.45
CLIC1-208ENST00000375784 IFT172Q9UG01 1749 aa24.1■■□□□ 1.45
CLIC1-208ENST00000375784 EP400Q96L91 3159 aa24.1■■□□□ 1.45
CLIC1-208ENST00000375784 UNC5CLQ8IV45 518 aa24.09■■□□□ 1.45
CLIC1-208ENST00000375784 TMEM132EQ6IEE7 984 aa24.08■■□□□ 1.45
CLIC1-208ENST00000375784 BLMP54132 1417 aaPredicted RBP24.08■■□□□ 1.44
CLIC1-208ENST00000375784 MARF1Q9Y4F3 1742 aaKnown RBP24.07■■□□□ 1.44
CLIC1-208ENST00000375784 MSH5O43196 834 aa24.07■■□□□ 1.44
CLIC1-208ENST00000375784 CFAP70Q5T0N1 1121 aa24.07■■□□□ 1.44
CLIC1-208ENST00000375784 STK26Q9P289 416 aa24.07■■□□□ 1.44
CLIC1-208ENST00000375784 RALGAPBQ86X10 1494 aa24.07■■□□□ 1.44
CLIC1-208ENST00000375784 NRXN1Q9ULB1 1477 aa24.07■■□□□ 1.44
CLIC1-208ENST00000375784 SLIT2O94813 1529 aa24.05■■□□□ 1.44
CLIC1-208ENST00000375784 NUTM2FA1L443 756 aa24.05■■□□□ 1.44
CLIC1-208ENST00000375784 WAPLQ7Z5K2 1190 aa24.04■■□□□ 1.44
CLIC1-208ENST00000375784 SPATA31A3Q5VYP0 1347 aa24.04■■□□□ 1.44
CLIC1-208ENST00000375784 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.04■■□□□ 1.44
CLIC1-208ENST00000375784 DHX57Q6P158 1386 aaKnown RBP24.03■■□□□ 1.44
CLIC1-208ENST00000375784 ABCC11Q96J66 1382 aa24.03■■□□□ 1.44
CLIC1-208ENST00000375784 GLI3P10071 1580 aa24.03■■□□□ 1.44
CLIC1-208ENST00000375784 DEFB132Q7Z7B7 95 aa24.02■■□□□ 1.44
CLIC1-208ENST00000375784 TECPR2O15040 1411 aa24.01■■□□□ 1.43
CLIC1-208ENST00000375784 YTHDC2Q9H6S0 1430 aaKnown RBP24■■□□□ 1.43
CLIC1-208ENST00000375784 SF3B2Q13435 895 aaKnown RBP23.99■■□□□ 1.43
CLIC1-208ENST00000375784 SEPT12Q8IYM1 358 aa23.99■■□□□ 1.43
CLIC1-208ENST00000375784 SIRT1Q96EB6 747 aa23.99■■□□□ 1.43
CLIC1-208ENST00000375784 KRT28Q7Z3Y7 464 aa23.97■■□□□ 1.43
CLIC1-208ENST00000375784 SIN3AQ96ST3 1273 aa23.97■■□□□ 1.43
CLIC1-208ENST00000375784 PLEKHH1Q9ULM0 1364 aa23.97■■□□□ 1.43
CLIC1-208ENST00000375784 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
CLIC1-208ENST00000375784 VPS72Q15906 364 aa23.96■■□□□ 1.43
CLIC1-208ENST00000375784 USP32Q8NFA0 1604 aa23.95■■□□□ 1.42
CLIC1-208ENST00000375784 ONECUT3O60422 494 aaPredicted RBP23.94■■□□□ 1.42
CLIC1-208ENST00000375784 HAP1P54257 671 aaPredicted RBP23.93■■□□□ 1.42
CLIC1-208ENST00000375784 BRWD3Q6RI45 1802 aa23.92■■□□□ 1.42
CLIC1-208ENST00000375784 KIF1AQ12756 1690 aa23.92■■□□□ 1.42
CLIC1-208ENST00000375784 KRT27Q7Z3Y8 459 aa23.91■■□□□ 1.42
CLIC1-208ENST00000375784 CABLES1Q8TDN4 633 aa23.91■■□□□ 1.42
CLIC1-208ENST00000375784 L3MBTL2Q969R5 705 aa23.91■■□□□ 1.42
CLIC1-208ENST00000375784 FMN2Q9NZ56 1722 aa23.9■■□□□ 1.42
CLIC1-208ENST00000375784 PSME1Q06323 249 aa23.9■■□□□ 1.42
CLIC1-208ENST00000375784 POGKQ9P215 609 aa23.9■■□□□ 1.42
CLIC1-208ENST00000375784 CCDC9Q9Y3X0 531 aaKnown RBP23.9■■□□□ 1.42
CLIC1-208ENST00000375784 TNS3Q68CZ2 1445 aa23.9■■□□□ 1.42
CLIC1-208ENST00000375784 PRAM1Q96QH2 718 aa23.89■■□□□ 1.41
CLIC1-208ENST00000375784 PHF8Q9UPP1 1060 aa23.89■■□□□ 1.41
CLIC1-208ENST00000375784 TRAK1Q9UPV9 953 aa23.89■■□□□ 1.41
CLIC1-208ENST00000375784 LRP5O75197 1615 aa23.88■■□□□ 1.41
CLIC1-208ENST00000375784 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
CLIC1-208ENST00000375784 PLEKHG5O94827 1062 aa23.86■■□□□ 1.41
CLIC1-208ENST00000375784 PCGF6Q9BYE7 350 aa23.86■■□□□ 1.41
CLIC1-208ENST00000375784 SBNO1A3KN83 1393 aa23.86■■□□□ 1.41
CLIC1-208ENST00000375784 ADGRB1O14514 1584 aa23.86■■□□□ 1.41
CLIC1-208ENST00000375784 SAFB2Q14151 953 aaKnown RBP eCLIP23.85■■□□□ 1.41
CLIC1-208ENST00000375784 FAM83GA6ND36 823 aa23.84■■□□□ 1.41
CLIC1-208ENST00000375784 BAG6P46379 1132 aa23.84■■□□□ 1.41
CLIC1-208ENST00000375784 LMOD2Q6P5Q4 547 aa23.84■■□□□ 1.41
CLIC1-208ENST00000375784 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
CLIC1-208ENST00000375784 ARHGEF10O15013 1369 aa23.83■■□□□ 1.41
CLIC1-208ENST00000375784 PSDA5PKW4 1024 aaPredicted RBP23.83■■□□□ 1.41
CLIC1-208ENST00000375784 NWD2Q9ULI1 1742 aa23.83■■□□□ 1.41
CLIC1-208ENST00000375784 PLCH1Q4KWH8 1693 aa23.83■■□□□ 1.4
CLIC1-208ENST00000375784 A0A0G2JS52 829 aa23.8■■□□□ 1.4
CLIC1-208ENST00000375784 MYT1Q01538 1121 aa23.8■■□□□ 1.4
CLIC1-208ENST00000375784 FAM98CQ17RN3 349 aaKnown RBP23.79■■□□□ 1.4
CLIC1-208ENST00000375784 NBPF1Q3BBV0 1214 aa23.79■■□□□ 1.4
CLIC1-208ENST00000375784 TONSLQ96HA7 1378 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms