RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 MARF1Q9Y4F3 1742 aaKnown RBP14.57□□□□□ -0.08
HLA-DOA-202ENST00000374813 SPHKAPQ2M3C7 1700 aa14.56□□□□□ -0.08
HLA-DOA-202ENST00000374813 YY1P25490 414 aa14.56□□□□□ -0.08
HLA-DOA-202ENST00000374813 RALGAPBQ86X10 1494 aa14.56□□□□□ -0.08
HLA-DOA-202ENST00000374813 E9PCH4 1651 aa14.55□□□□□ -0.08
HLA-DOA-202ENST00000374813 KRT27Q7Z3Y8 459 aa14.55□□□□□ -0.08
HLA-DOA-202ENST00000374813 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.55□□□□□ -0.08
HLA-DOA-202ENST00000374813 ONECUT3O60422 494 aaPredicted RBP14.54□□□□□ -0.08
HLA-DOA-202ENST00000374813 ESCO1Q5FWF5 840 aa14.54□□□□□ -0.08
HLA-DOA-202ENST00000374813 LRPPRCP42704 1394 aaKnown RBP14.54□□□□□ -0.08
HLA-DOA-202ENST00000374813 BRWD3Q6RI45 1802 aa14.53□□□□□ -0.08
HLA-DOA-202ENST00000374813 IQGAP3Q86VI3 1631 aa14.53□□□□□ -0.08
HLA-DOA-202ENST00000374813 GLI3P10071 1580 aa14.51□□□□□ -0.09
HLA-DOA-202ENST00000374813 SLIT2O94813 1529 aa14.51□□□□□ -0.09
HLA-DOA-202ENST00000374813 FOXO3O43524 673 aa14.51□□□□□ -0.09
HLA-DOA-202ENST00000374813 VPS72Q15906 364 aa14.51□□□□□ -0.09
HLA-DOA-202ENST00000374813 FAM50AQ14320 339 aaKnown RBP14.5□□□□□ -0.09
HLA-DOA-202ENST00000374813 CCDC9Q9Y3X0 531 aaKnown RBP14.49□□□□□ -0.09
HLA-DOA-202ENST00000374813 NUP155O75694 1391 aa14.48□□□□□ -0.09
HLA-DOA-202ENST00000374813 DCAF8L1A6NGE4 600 aa14.48□□□□□ -0.09
HLA-DOA-202ENST00000374813 VGFO15240 615 aaPredicted RBP14.48□□□□□ -0.09
HLA-DOA-202ENST00000374813 R3HDM1Q15032 1099 aaKnown RBP14.48□□□□□ -0.09
HLA-DOA-202ENST00000374813 PXDNQ92626 1479 aa14.48□□□□□ -0.09
HLA-DOA-202ENST00000374813 HFM1A2PYH4 1435 aa14.48□□□□□ -0.09
HLA-DOA-202ENST00000374813 ROBO2Q9HCK4 1378 aa14.47□□□□□ -0.09
HLA-DOA-202ENST00000374813 XPCQ01831 940 aaPredicted RBP14.47□□□□□ -0.09
HLA-DOA-202ENST00000374813 HAP1P54257 671 aaPredicted RBP14.46□□□□□ -0.09
HLA-DOA-202ENST00000374813 EN1Q05925 392 aaPredicted RBP14.46□□□□□ -0.09
HLA-DOA-202ENST00000374813 SPATA31A3Q5VYP0 1347 aa14.44□□□□□ -0.1
HLA-DOA-202ENST00000374813 A0A0G2JS52 829 aa14.44□□□□□ -0.1
HLA-DOA-202ENST00000374813 MYT1Q01538 1121 aa14.44□□□□□ -0.1
HLA-DOA-202ENST00000374813 PRAG1Q86YV5 1406 aa14.43□□□□□ -0.1
HLA-DOA-202ENST00000374813 NEXMIFQ5QGS0 1516 aa14.41□□□□□ -0.1
HLA-DOA-202ENST00000374813 ROCK1Q13464 1354 aa14.41□□□□□ -0.1
HLA-DOA-202ENST00000374813 PSME1Q06323 249 aa14.4□□□□□ -0.1
HLA-DOA-202ENST00000374813 KRT28Q7Z3Y7 464 aa14.4□□□□□ -0.1
HLA-DOA-202ENST00000374813 NWD2Q9ULI1 1742 aa14.4□□□□□ -0.1
HLA-DOA-202ENST00000374813 USP32Q8NFA0 1604 aa14.4□□□□□ -0.1
HLA-DOA-202ENST00000374813 UTRNP46939 3433 aa14.4□□□□□ -0.1
HLA-DOA-202ENST00000374813 CDC42BPGQ6DT37 1551 aa14.39□□□□□ -0.11
HLA-DOA-202ENST00000374813 FAM98CQ17RN3 349 aaKnown RBP14.39□□□□□ -0.11
HLA-DOA-202ENST00000374813 CCDC144AA2RUR9 1427 aa14.39□□□□□ -0.11
HLA-DOA-202ENST00000374813 DISP2A7MBM2 1401 aa14.39□□□□□ -0.11
HLA-DOA-202ENST00000374813 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
HLA-DOA-202ENST00000374813 RPGRIP1LQ68CZ1 1315 aa14.38□□□□□ -0.11
HLA-DOA-202ENST00000374813 NUTM2FA1L443 756 aa14.37□□□□□ -0.11
HLA-DOA-202ENST00000374813 EZH2Q15910 746 aaKnown RBP14.37□□□□□ -0.11
HLA-DOA-202ENST00000374813 KIF1BO60333 1816 aa14.36□□□□□ -0.11
HLA-DOA-202ENST00000374813 LOC105371045A0A1W2PR82 267 aa14.36□□□□□ -0.11
HLA-DOA-202ENST00000374813 FAM83GA6ND36 823 aa14.36□□□□□ -0.11
HLA-DOA-202ENST00000374813 IFFO2Q5TF58 517 aa14.36□□□□□ -0.11
HLA-DOA-202ENST00000374813 PPP1R1BQ9UD71 204 aaPredicted RBP14.36□□□□□ -0.11
HLA-DOA-202ENST00000374813 NBPF8Q3BBV2 869 aa14.35□□□□□ -0.11
HLA-DOA-202ENST00000374813 NBPF14Q5TI25 921 aa14.35□□□□□ -0.11
HLA-DOA-202ENST00000374813 CABLES1Q8TDN4 633 aa14.35□□□□□ -0.11
HLA-DOA-202ENST00000374813 CAMKK2Q96RR4 588 aa14.35□□□□□ -0.11
HLA-DOA-202ENST00000374813 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
HLA-DOA-202ENST00000374813 NAIPQ13075 1403 aa14.34□□□□□ -0.11
HLA-DOA-202ENST00000374813 PLCH1Q4KWH8 1693 aa14.33□□□□□ -0.11
HLA-DOA-202ENST00000374813 LMOD2Q6P5Q4 547 aa14.33□□□□□ -0.12
HLA-DOA-202ENST00000374813 FAM196AQ6ZSG2 479 aa14.33□□□□□ -0.12
HLA-DOA-202ENST00000374813 SPON1Q9HCB6 807 aa14.33□□□□□ -0.12
HLA-DOA-202ENST00000374813 BTG4Q9NY30 223 aa14.33□□□□□ -0.12
HLA-DOA-202ENST00000374813 ARHGEF10O15013 1369 aa14.33□□□□□ -0.12
HLA-DOA-202ENST00000374813 TNS3Q68CZ2 1445 aa14.32□□□□□ -0.12
HLA-DOA-202ENST00000374813 FAM182BQ5T319 152 aa14.32□□□□□ -0.12
HLA-DOA-202ENST00000374813 KIF1AQ12756 1690 aa14.32□□□□□ -0.12
HLA-DOA-202ENST00000374813 CLTCL1P53675 1640 aa14.31□□□□□ -0.12
HLA-DOA-202ENST00000374813 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
HLA-DOA-202ENST00000374813 APBA3O96018 575 aa14.31□□□□□ -0.12
HLA-DOA-202ENST00000374813 WAPLQ7Z5K2 1190 aa14.31□□□□□ -0.12
HLA-DOA-202ENST00000374813 PHF8Q9UPP1 1060 aa14.31□□□□□ -0.12
HLA-DOA-202ENST00000374813 SBNO1A3KN83 1393 aa14.31□□□□□ -0.12
HLA-DOA-202ENST00000374813 NINLQ9Y2I6 1382 aa14.31□□□□□ -0.12
HLA-DOA-202ENST00000374813 TRIM37O94972 964 aa14.3□□□□□ -0.12
HLA-DOA-202ENST00000374813 KCNQ2O43526 872 aa14.29□□□□□ -0.12
HLA-DOA-202ENST00000374813 STK26Q9P289 416 aa14.29□□□□□ -0.12
HLA-DOA-202ENST00000374813 SPATA31A5Q5VU36 1347 aa14.29□□□□□ -0.12
HLA-DOA-202ENST00000374813 SPATA31A7Q8IWB4 1347 aa14.29□□□□□ -0.12
HLA-DOA-202ENST00000374813 ADGRB2O60241 1585 aa14.29□□□□□ -0.12
HLA-DOA-202ENST00000374813 SENP3-EIF4A1A0A087X0R7 540 aa14.28□□□□□ -0.12
HLA-DOA-202ENST00000374813 ZNF784Q8NCA9 323 aaPredicted RBP14.28□□□□□ -0.12
HLA-DOA-202ENST00000374813 TNS1Q9HBL0 1735 aaKnown RBP14.27□□□□□ -0.12
HLA-DOA-202ENST00000374813 TECPR2O15040 1411 aa14.27□□□□□ -0.12
HLA-DOA-202ENST00000374813 ABCC11Q96J66 1382 aa14.27□□□□□ -0.12
HLA-DOA-202ENST00000374813 CEP350Q5VT06 3117 aa14.26□□□□□ -0.13
HLA-DOA-202ENST00000374813 FMN2Q9NZ56 1722 aa14.25□□□□□ -0.13
HLA-DOA-202ENST00000374813 ITGAEP38570 1179 aa14.24□□□□□ -0.13
HLA-DOA-202ENST00000374813 C1QTNF8P60827 252 aa14.24□□□□□ -0.13
HLA-DOA-202ENST00000374813 SIRT1Q96EB6 747 aa14.24□□□□□ -0.13
HLA-DOA-202ENST00000374813 NRAPQ86VF7 1730 aa14.24□□□□□ -0.13
HLA-DOA-202ENST00000374813 COL14A1Q05707 1796 aaKnown RBP14.23□□□□□ -0.13
HLA-DOA-202ENST00000374813 PPLO60437 1756 aa14.22□□□□□ -0.13
HLA-DOA-202ENST00000374813 ABCA3Q99758 1704 aa14.22□□□□□ -0.13
HLA-DOA-202ENST00000374813 PDE3BQ13370 1112 aa14.22□□□□□ -0.13
HLA-DOA-202ENST00000374813 NRXN1Q9ULB1 1477 aa14.22□□□□□ -0.13
HLA-DOA-202ENST00000374813 RRBP1Q9P2E9 1410 aaKnown RBP14.21□□□□□ -0.13
HLA-DOA-202ENST00000374813 RGPD8O14715 1765 aaPredicted RBP14.21□□□□□ -0.13
HLA-DOA-202ENST00000374813 PLEKHH1Q9ULM0 1364 aa14.21□□□□□ -0.14
HLA-DOA-202ENST00000374813 THSD7AQ9UPZ6 1657 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms