RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 AMOTL2Q9Y2J4 779 aa24.88■■□□□ 1.57
PFDN6-201ENST00000374606 PTPRUQ92729 1446 aa24.86■■□□□ 1.57
PFDN6-201ENST00000374606 NUTM2BA6NNL0 878 aaPredicted RBP24.86■■□□□ 1.57
PFDN6-201ENST00000374606 NUTM2EB1AL46 878 aaPredicted RBP24.86■■□□□ 1.57
PFDN6-201ENST00000374606 NUTM2AQ8IVF1 878 aaPredicted RBP24.86■■□□□ 1.57
PFDN6-201ENST00000374606 ASXL1Q8IXJ9 1541 aa24.85■■□□□ 1.57
PFDN6-201ENST00000374606 ROCK2O75116 1388 aaKnown RBP24.83■■□□□ 1.57
PFDN6-201ENST00000374606 XRN1Q8IZH2 1706 aaKnown RBP24.83■■□□□ 1.57
PFDN6-201ENST00000374606 SETBP1Q9Y6X0 1596 aa24.82■■□□□ 1.56
PFDN6-201ENST00000374606 AFF2P51816 1311 aa24.82■■□□□ 1.56
PFDN6-201ENST00000374606 NHSL1Q5SYE7 1610 aa24.81■■□□□ 1.56
PFDN6-201ENST00000374606 NRXN3Q9Y4C0 1643 aa24.81■■□□□ 1.56
PFDN6-201ENST00000374606 MST1RQ04912 1400 aa24.8■■□□□ 1.56
PFDN6-201ENST00000374606 GPRASP1Q5JY77 1395 aa24.8■■□□□ 1.56
PFDN6-201ENST00000374606 CFAP70Q5T0N1 1121 aa24.77■■□□□ 1.56
PFDN6-201ENST00000374606 LRRC59Q96AG4 307 aaKnown RBP24.76■■□□□ 1.55
PFDN6-201ENST00000374606 C14orf93Q9H972 538 aaKnown RBP24.76■■□□□ 1.55
PFDN6-201ENST00000374606 NBPF1Q3BBV0 1214 aa24.75■■□□□ 1.55
PFDN6-201ENST00000374606 CARD11Q9BXL7 1154 aa24.75■■□□□ 1.55
PFDN6-201ENST00000374606 ADGRB1O14514 1584 aa24.75■■□□□ 1.55
PFDN6-201ENST00000374606 RGS12O14924 1447 aa24.73■■□□□ 1.55
PFDN6-201ENST00000374606 ADGRL3Q9HAR2 1447 aa24.72■■□□□ 1.55
PFDN6-201ENST00000374606 C8orf37Q96NL8 207 aa24.72■■□□□ 1.55
PFDN6-201ENST00000374606 PNPLA6Q8IY17 1366 aa24.71■■□□□ 1.55
PFDN6-201ENST00000374606 USP47Q96K76 1375 aa24.71■■□□□ 1.55
PFDN6-201ENST00000374606 RBM6P78332 1123 aaKnown RBP24.71■■□□□ 1.55
PFDN6-201ENST00000374606 METP08581 1390 aa24.7■■□□□ 1.55
PFDN6-201ENST00000374606 QTRT2Q9H974 415 aaKnown RBP24.69■■□□□ 1.54
PFDN6-201ENST00000374606 EIF4G2P78344 907 aaKnown RBP eCLIP24.68■■□□□ 1.54
PFDN6-201ENST00000374606 NALCNQ8IZF0 1738 aa24.67■■□□□ 1.54
PFDN6-201ENST00000374606 DDX17Q92841 729 aaKnown RBP24.66■■□□□ 1.54
PFDN6-201ENST00000374606 EIF3AQ14152 1382 aaKnown RBP24.65■■□□□ 1.54
PFDN6-201ENST00000374606 TMEM132EQ6IEE7 984 aa24.64■■□□□ 1.54
PFDN6-201ENST00000374606 HSPA5P11021 654 aaKnown RBP24.63■■□□□ 1.53
PFDN6-201ENST00000374606 ARHGEF28Q8N1W1 1705 aaKnown RBP24.63■■□□□ 1.53
PFDN6-201ENST00000374606 YTHDC2Q9H6S0 1430 aaKnown RBP24.62■■□□□ 1.53
PFDN6-201ENST00000374606 KNDC1Q76NI1 1749 aa24.62■■□□□ 1.53
PFDN6-201ENST00000374606 NGLY1Q96IV0 654 aa24.62■■□□□ 1.53
PFDN6-201ENST00000374606 C1orf167Q5SNV9 1468 aa24.61■■□□□ 1.53
PFDN6-201ENST00000374606 ADAMTS2O95450 1211 aa24.6■■□□□ 1.53
PFDN6-201ENST00000374606 LRPPRCP42704 1394 aaKnown RBP24.58■■□□□ 1.53
PFDN6-201ENST00000374606 ATAD2Q6PL18 1390 aa24.58■■□□□ 1.53
PFDN6-201ENST00000374606 PTCH1Q13635 1447 aa24.58■■□□□ 1.53
PFDN6-201ENST00000374606 DLC1Q96QB1 1528 aa24.57■■□□□ 1.52
PFDN6-201ENST00000374606 HIRIP3Q9BW71 556 aaPredicted RBP24.56■■□□□ 1.52
PFDN6-201ENST00000374606 TRAK1Q9UPV9 953 aa24.56■■□□□ 1.52
PFDN6-201ENST00000374606 ZNF316A6NFI3 1004 aaPredicted RBP24.55■■□□□ 1.52
PFDN6-201ENST00000374606 STK26Q9P289 416 aa24.55■■□□□ 1.52
PFDN6-201ENST00000374606 QRICH2Q9H0J4 1663 aa24.55■■□□□ 1.52
PFDN6-201ENST00000374606 SOS2Q07890 1332 aaPredicted RBP24.55■■□□□ 1.52
PFDN6-201ENST00000374606 ST20-MTHFSA0A0A6YYL1 179 aa24.54■■□□□ 1.52
PFDN6-201ENST00000374606 USP21Q9UK80 565 aa24.54■■□□□ 1.52
PFDN6-201ENST00000374606 TECPR2O15040 1411 aa24.53■■□□□ 1.52
PFDN6-201ENST00000374606 TRPC5Q9UL62 973 aaPredicted RBP24.53■■□□□ 1.52
PFDN6-201ENST00000374606 ABCC11Q96J66 1382 aa24.53■■□□□ 1.52
PFDN6-201ENST00000374606 ORAI2Q96SN7 254 aa24.51■■□□□ 1.51
PFDN6-201ENST00000374606 ROBO2Q9HCK4 1378 aa24.51■■□□□ 1.51
PFDN6-201ENST00000374606 CENPJQ9HC77 1338 aaPredicted RBP24.5■■□□□ 1.51
PFDN6-201ENST00000374606 COL22A1Q8NFW1 1626 aaPredicted RBP24.5■■□□□ 1.51
PFDN6-201ENST00000374606 FNBP4Q8N3X1 1017 aaPredicted RBP24.49■■□□□ 1.51
PFDN6-201ENST00000374606 ATRNO75882 1429 aa24.49■■□□□ 1.51
PFDN6-201ENST00000374606 SRCAPQ6ZRS2 3230 aa24.48■■□□□ 1.51
PFDN6-201ENST00000374606 SBNO2Q9Y2G9 1366 aa24.47■■□□□ 1.51
PFDN6-201ENST00000374606 PRAM1Q96QH2 718 aa24.44■■□□□ 1.5
PFDN6-201ENST00000374606 TESK2Q96S53 571 aa24.44■■□□□ 1.5
PFDN6-201ENST00000374606 POGKQ9P215 609 aa24.44■■□□□ 1.5
PFDN6-201ENST00000374606 ZRANB1Q9UGI0 708 aa24.44■■□□□ 1.5
PFDN6-201ENST00000374606 SIRT1Q96EB6 747 aa24.42■■□□□ 1.5
PFDN6-201ENST00000374606 NPHP3Q7Z494 1330 aa24.41■■□□□ 1.5
PFDN6-201ENST00000374606 PLEKHH1Q9ULM0 1364 aa24.41■■□□□ 1.5
PFDN6-201ENST00000374606 SLC24A1O60721 1099 aa24.4■■□□□ 1.5
PFDN6-201ENST00000374606 TMF1P82094 1093 aa24.4■■□□□ 1.5
PFDN6-201ENST00000374606 CDC42BPGQ6DT37 1551 aa24.4■■□□□ 1.5
PFDN6-201ENST00000374606 MARF1Q9Y4F3 1742 aaKnown RBP24.39■■□□□ 1.5
PFDN6-201ENST00000374606 SAFB2Q14151 953 aaKnown RBP eCLIP24.39■■□□□ 1.49
PFDN6-201ENST00000374606 CCDC125Q86Z20 511 aa24.39■■□□□ 1.49
PFDN6-201ENST00000374606 BCL9LQ86UU0 1499 aa24.38■■□□□ 1.49
PFDN6-201ENST00000374606 PXDNQ92626 1479 aa24.38■■□□□ 1.49
PFDN6-201ENST00000374606 ESCO1Q5FWF5 840 aa24.37■■□□□ 1.49
PFDN6-201ENST00000374606 WAPLQ7Z5K2 1190 aa24.37■■□□□ 1.49
PFDN6-201ENST00000374606 CCDC7Q96M83 1385 aa24.37■■□□□ 1.49
PFDN6-201ENST00000374606 TULP4Q9NRJ4 1543 aa24.36■■□□□ 1.49
PFDN6-201ENST00000374606 EP400Q96L91 3159 aa24.36■■□□□ 1.49
PFDN6-201ENST00000374606 KIF7Q2M1P5 1343 aa24.35■■□□□ 1.49
PFDN6-201ENST00000374606 ADGRB2O60241 1585 aa24.35■■□□□ 1.49
PFDN6-201ENST00000374606 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
PFDN6-201ENST00000374606 MINK1Q8N4C8 1332 aaPredicted RBP24.35■■□□□ 1.49
PFDN6-201ENST00000374606 C11orf95C9JLR9 678 aaPredicted RBP24.34■■□□□ 1.49
PFDN6-201ENST00000374606 GJD4Q96KN9 370 aaPredicted RBP24.33■■□□□ 1.49
PFDN6-201ENST00000374606 CDCA8Q53HL2 280 aa24.32■■□□□ 1.48
PFDN6-201ENST00000374606 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.32■■□□□ 1.48
PFDN6-201ENST00000374606 FOXO3O43524 673 aa24.31■■□□□ 1.48
PFDN6-201ENST00000374606 XPCQ01831 940 aaPredicted RBP24.31■■□□□ 1.48
PFDN6-201ENST00000374606 POLR3GLQ9BT43 218 aa24.31■■□□□ 1.48
PFDN6-201ENST00000374606 EVC2Q86UK5 1308 aa24.31■■□□□ 1.48
PFDN6-201ENST00000374606 BLMP54132 1417 aaPredicted RBP24.26■■□□□ 1.47
PFDN6-201ENST00000374606 SLIT2O94813 1529 aa24.25■■□□□ 1.47
PFDN6-201ENST00000374606 GLI3P10071 1580 aa24.25■■□□□ 1.47
PFDN6-201ENST00000374606 MYOM1P52179 1685 aa24.25■■□□□ 1.47
PFDN6-201ENST00000374606 UNC5CLQ8IV45 518 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms