RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 RTL5Q5HYW3 569 aaPredicted RBP22.32■■□□□ 1.16
PHF1-202ENST00000374516 CABP2Q9NPB3 220 aa22.31■■□□□ 1.16
PHF1-202ENST00000374516 NPC1L1Q9UHC9 1359 aa22.31■■□□□ 1.16
PHF1-202ENST00000374516 EVC2Q86UK5 1308 aa22.31■■□□□ 1.16
PHF1-202ENST00000374516 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
PHF1-202ENST00000374516 ARHGEF28Q8N1W1 1705 aaKnown RBP22.29■■□□□ 1.16
PHF1-202ENST00000374516 A2ML1A8K2U0 1454 aa22.29■■□□□ 1.16
PHF1-202ENST00000374516 RRP1P56182 461 aaKnown RBP22.29■■□□□ 1.16
PHF1-202ENST00000374516 PRAM1Q96QH2 718 aa22.29■■□□□ 1.16
PHF1-202ENST00000374516 WDR43Q15061 677 aaKnown RBP eCLIP22.27■■□□□ 1.16
PHF1-202ENST00000374516 NSD3Q9BZ95 1437 aa22.27■■□□□ 1.16
PHF1-202ENST00000374516 EXOC6Q8TAG9 804 aa22.26■■□□□ 1.15
PHF1-202ENST00000374516 POGKQ9P215 609 aa22.26■■□□□ 1.15
PHF1-202ENST00000374516 MINK1Q8N4C8 1332 aaPredicted RBP22.26■■□□□ 1.15
PHF1-202ENST00000374516 TCERG1O14776 1098 aaKnown RBP22.26■■□□□ 1.15
PHF1-202ENST00000374516 YTHDC2Q9H6S0 1430 aaKnown RBP22.26■■□□□ 1.15
PHF1-202ENST00000374516 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
PHF1-202ENST00000374516 TNNT2P45379 298 aaPredicted RBP22.25■■□□□ 1.15
PHF1-202ENST00000374516 SRPK2P78362 688 aaKnown RBP22.25■■□□□ 1.15
PHF1-202ENST00000374516 RIMS2Q9UQ26 1411 aa22.25■■□□□ 1.15
PHF1-202ENST00000374516 RCAN3Q9UKA8 241 aa22.24■■□□□ 1.15
PHF1-202ENST00000374516 BLMP54132 1417 aaPredicted RBP22.24■■□□□ 1.15
PHF1-202ENST00000374516 ALKQ9UM73 1620 aa22.24■■□□□ 1.15
PHF1-202ENST00000374516 CDCA7LQ96GN5 454 aa22.23■■□□□ 1.15
PHF1-202ENST00000374516 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
PHF1-202ENST00000374516 PTPRMP28827 1452 aa22.22■■□□□ 1.15
PHF1-202ENST00000374516 PDE4AP27815 886 aa22.2■■□□□ 1.15
PHF1-202ENST00000374516 MORC1Q86VD1 984 aa22.2■■□□□ 1.15
PHF1-202ENST00000374516 NPM2Q86SE8 214 aaKnown RBP22.2■■□□□ 1.14
PHF1-202ENST00000374516 PUS7Q96PZ0 661 aaKnown RBP22.19■■□□□ 1.14
PHF1-202ENST00000374516 CEBPAP49715 358 aaPredicted RBP22.19■■□□□ 1.14
PHF1-202ENST00000374516 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
PHF1-202ENST00000374516 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
PHF1-202ENST00000374516 INSRP06213 1382 aa22.18■■□□□ 1.14
PHF1-202ENST00000374516 PDE3BQ13370 1112 aa22.18■■□□□ 1.14
PHF1-202ENST00000374516 BACH2Q9BYV9 841 aa22.18■■□□□ 1.14
PHF1-202ENST00000374516 CCDC146Q8IYE0 955 aa22.17■■□□□ 1.14
PHF1-202ENST00000374516 TNRQ92752 1358 aa22.17■■□□□ 1.14
PHF1-202ENST00000374516 MS4A1P11836 297 aa22.17■■□□□ 1.14
PHF1-202ENST00000374516 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
PHF1-202ENST00000374516 ANKRD36BQ8N2N9 1353 aa22.16■■□□□ 1.14
PHF1-202ENST00000374516 CDK19Q9BWU1 502 aa22.14■■□□□ 1.14
PHF1-202ENST00000374516 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.13■■□□□ 1.13
PHF1-202ENST00000374516 USP35Q9P2H5 1018 aa22.12■■□□□ 1.13
PHF1-202ENST00000374516 PLEKHH1Q9ULM0 1364 aa22.12■■□□□ 1.13
PHF1-202ENST00000374516 A0A1W2PP64 1363 aa22.11■■□□□ 1.13
PHF1-202ENST00000374516 METP08581 1390 aa22.11■■□□□ 1.13
PHF1-202ENST00000374516 NEFMP07197 916 aa22.09■■□□□ 1.13
PHF1-202ENST00000374516 HDGFP51858 240 aaKnown RBP22.09■■□□□ 1.13
PHF1-202ENST00000374516 TXNDC2Q86VQ3 553 aa22.09■■□□□ 1.13
PHF1-202ENST00000374516 ATAD2Q6PL18 1390 aa22.08■■□□□ 1.13
PHF1-202ENST00000374516 MTHFSP49914 203 aa22.08■■□□□ 1.13
PHF1-202ENST00000374516 CABP1Q9NZU7 370 aa22.08■■□□□ 1.13
PHF1-202ENST00000374516 LAS1LQ9Y4W2 734 aaKnown RBP22.08■■□□□ 1.13
PHF1-202ENST00000374516 APAF1O14727 1248 aa22.08■■□□□ 1.12
PHF1-202ENST00000374516 GGNBP2Q9H3C7 697 aa22.07■■□□□ 1.12
PHF1-202ENST00000374516 POLR3AO14802 1390 aaPredicted RBP22.06■■□□□ 1.12
PHF1-202ENST00000374516 ABCC11Q96J66 1382 aa22.06■■□□□ 1.12
PHF1-202ENST00000374516 TMEM2Q9UHN6 1383 aa22.06■■□□□ 1.12
PHF1-202ENST00000374516 TERF2IPQ9NYB0 399 aa22.06■■□□□ 1.12
PHF1-202ENST00000374516 NRXN3Q9Y4C0 1643 aa22.06■■□□□ 1.12
PHF1-202ENST00000374516 SETD1AO15047 1707 aaKnown RBP22.05■■□□□ 1.12
PHF1-202ENST00000374516 NINLQ9Y2I6 1382 aa22.05■■□□□ 1.12
PHF1-202ENST00000374516 PPM1GO15355 546 aaPredicted RBP22.04■■□□□ 1.12
PHF1-202ENST00000374516 LTKP29376 864 aa22.03■■□□□ 1.12
PHF1-202ENST00000374516 PLIN1O60240 522 aa22.03■■□□□ 1.12
PHF1-202ENST00000374516 USP32Q8NFA0 1604 aa22.03■■□□□ 1.12
PHF1-202ENST00000374516 CD163L1Q9NR16 1453 aa22.02■■□□□ 1.12
PHF1-202ENST00000374516 ZNF521Q96K83 1311 aa22.02■■□□□ 1.11
PHF1-202ENST00000374516 FYB1O15117 783 aa22.01■■□□□ 1.11
PHF1-202ENST00000374516 HDGFL2Q7Z4V5 671 aaPredicted RBP22.01■■□□□ 1.11
PHF1-202ENST00000374516 IL27Q8NEV9 243 aa22.01■■□□□ 1.11
PHF1-202ENST00000374516 DLC1Q96QB1 1528 aa22.01■■□□□ 1.11
PHF1-202ENST00000374516 UBR1Q8IWV7 1749 aa22.01■■□□□ 1.11
PHF1-202ENST00000374516 GOLGA2Q08379 1002 aa22.01■■□□□ 1.11
PHF1-202ENST00000374516 NSD2O96028 1365 aa22■■□□□ 1.11
PHF1-202ENST00000374516 DUSP27Q5VZP5 1158 aa21.98■■□□□ 1.11
PHF1-202ENST00000374516 CRBNQ96SW2 442 aa21.98■■□□□ 1.11
PHF1-202ENST00000374516 WASLO00401 505 aaPredicted RBP21.98■■□□□ 1.11
PHF1-202ENST00000374516 CFAP53Q96M91 514 aa21.98■■□□□ 1.11
PHF1-202ENST00000374516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.97■■□□□ 1.11
PHF1-202ENST00000374516 SLC26A8Q96RN1 970 aa21.97■■□□□ 1.11
PHF1-202ENST00000374516 DDRGK1Q96HY6 314 aa21.97■■□□□ 1.11
PHF1-202ENST00000374516 SPINK5Q9NQ38 1064 aaPredicted RBP21.97■■□□□ 1.11
PHF1-202ENST00000374516 NCKAP5LQ9HCH0 1330 aa21.96■■□□□ 1.11
PHF1-202ENST00000374516 NEUROD2Q15784 382 aa21.96■■□□□ 1.11
PHF1-202ENST00000374516 SKAP1Q86WV1 359 aa21.96■■□□□ 1.11
PHF1-202ENST00000374516 NLRP1Q9C000 1473 aa21.95■■□□□ 1.1
PHF1-202ENST00000374516 ADAMTS13Q76LX8 1427 aa21.94■■□□□ 1.1
PHF1-202ENST00000374516 SLFN5Q08AF3 891 aa21.94■■□□□ 1.1
PHF1-202ENST00000374516 RRP7AQ9Y3A4 280 aaKnown RBP21.94■■□□□ 1.1
PHF1-202ENST00000374516 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
PHF1-202ENST00000374516 ANO8Q9HCE9 1232 aaPredicted RBP21.94■■□□□ 1.1
PHF1-202ENST00000374516 EID1Q9Y6B2 187 aa21.94■■□□□ 1.1
PHF1-202ENST00000374516 C3P01024 1663 aa21.93■■□□□ 1.1
PHF1-202ENST00000374516 SHPRHQ149N8 1683 aa21.93■■□□□ 1.1
PHF1-202ENST00000374516 ROBO2Q9HCK4 1378 aa21.92■■□□□ 1.1
PHF1-202ENST00000374516 U2AF1L5P0DN76 240 aaPredicted RBP21.92■■□□□ 1.1
PHF1-202ENST00000374516 U2AF1Q01081 240 aaKnown RBP eCLIP21.92■■□□□ 1.1
PHF1-202ENST00000374516 RUNDC1Q96C34 613 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms