RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PPP1R9BQ96SB3 815 aa16.32■□□□□ 0.2
PRPF4-201ENST00000374198 PDE3AQ14432 1141 aa16.31■□□□□ 0.2
PRPF4-201ENST00000374198 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
PRPF4-201ENST00000374198 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
PRPF4-201ENST00000374198 ATP7AQ04656 1500 aa16.31■□□□□ 0.2
PRPF4-201ENST00000374198 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
PRPF4-201ENST00000374198 NKTRP30414 1462 aaKnown RBP16.31■□□□□ 0.2
PRPF4-201ENST00000374198 PANK3Q9H999 370 aa16.31■□□□□ 0.2
PRPF4-201ENST00000374198 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
PRPF4-201ENST00000374198 ZNF692Q9BU19 519 aaPredicted RBP16.3■□□□□ 0.2
PRPF4-201ENST00000374198 TSPY4P0CV99 314 aa16.3■□□□□ 0.2
PRPF4-201ENST00000374198 TSPY10P0CW01 314 aa16.3■□□□□ 0.2
PRPF4-201ENST00000374198 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
PRPF4-201ENST00000374198 ADAMTSL3P82987 1691 aa16.29■□□□□ 0.2
PRPF4-201ENST00000374198 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
PRPF4-201ENST00000374198 MADDQ8WXG6 1647 aa16.28■□□□□ 0.2
PRPF4-201ENST00000374198 INO80Q9ULG1 1556 aaPredicted RBP16.28■□□□□ 0.2
PRPF4-201ENST00000374198 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
PRPF4-201ENST00000374198 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.2
PRPF4-201ENST00000374198 SKOR2Q2VWA4 1001 aaPredicted RBP16.27■□□□□ 0.2
PRPF4-201ENST00000374198 MTERF4Q7Z6M4 381 aaKnown RBP16.26■□□□□ 0.19
PRPF4-201ENST00000374198 C22orf23Q9BZE7 217 aa16.26■□□□□ 0.19
PRPF4-201ENST00000374198 COG6Q9Y2V7 657 aa16.26■□□□□ 0.19
PRPF4-201ENST00000374198 RTEL1-TNFRSF6BF6WH68 1400 aa16.26■□□□□ 0.19
PRPF4-201ENST00000374198 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
PRPF4-201ENST00000374198 PMFBP1Q8TBY8 1022 aa16.26■□□□□ 0.19
PRPF4-201ENST00000374198 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
PRPF4-201ENST00000374198 REREQ9P2R6 1566 aa16.26■□□□□ 0.19
PRPF4-201ENST00000374198 DDIT3P35638 169 aa16.26■□□□□ 0.19
PRPF4-201ENST00000374198 ARHGEF5Q12774 1597 aa16.25■□□□□ 0.19
PRPF4-201ENST00000374198 PTPRMP28827 1452 aa16.25■□□□□ 0.19
PRPF4-201ENST00000374198 NASPP49321 788 aaPredicted RBP16.25■□□□□ 0.19
PRPF4-201ENST00000374198 HSCBQ8IWL3 235 aa16.25■□□□□ 0.19
PRPF4-201ENST00000374198 PANK1Q8TE04 598 aa16.25■□□□□ 0.19
PRPF4-201ENST00000374198 ESF1Q9H501 851 aaKnown RBP16.25■□□□□ 0.19
PRPF4-201ENST00000374198 PDZRN3Q9UPQ7 1066 aa16.25■□□□□ 0.19
PRPF4-201ENST00000374198 A2MP01023 1474 aa16.24■□□□□ 0.19
PRPF4-201ENST00000374198 TNPO1Q92973 898 aaKnown RBP16.24■□□□□ 0.19
PRPF4-201ENST00000374198 RIMS1Q86UR5 1692 aaKnown RBP16.24■□□□□ 0.19
PRPF4-201ENST00000374198 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
PRPF4-201ENST00000374198 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
PRPF4-201ENST00000374198 ANP32BQ92688 251 aaKnown RBP16.24■□□□□ 0.19
PRPF4-201ENST00000374198 NCOA3Q9Y6Q9 1424 aa16.23■□□□□ 0.19
PRPF4-201ENST00000374198 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
PRPF4-201ENST00000374198 E9PSI1 815 aa16.23■□□□□ 0.19
PRPF4-201ENST00000374198 PTMSP20962 102 aa16.23■□□□□ 0.19
PRPF4-201ENST00000374198 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
PRPF4-201ENST00000374198 AGLP35573 1532 aa16.23■□□□□ 0.19
PRPF4-201ENST00000374198 UQCRHLA0A096LP55 91 aa16.22■□□□□ 0.19
PRPF4-201ENST00000374198 UQCRHP07919 91 aa16.22■□□□□ 0.19
PRPF4-201ENST00000374198 CANXP27824 592 aaKnown RBP16.22■□□□□ 0.19
PRPF4-201ENST00000374198 ZHX1Q9UKY1 873 aaPredicted RBP16.22■□□□□ 0.19
PRPF4-201ENST00000374198 FER1L4A9Z1Z3 1794 aa16.21■□□□□ 0.19
PRPF4-201ENST00000374198 TESK2Q96S53 571 aa16.21■□□□□ 0.19
PRPF4-201ENST00000374198 UTP14CQ5TAP6 766 aaKnown RBP16.21■□□□□ 0.19
PRPF4-201ENST00000374198 ADGBQ8N7X0 1667 aa16.21■□□□□ 0.19
PRPF4-201ENST00000374198 MFAP1P55081 439 aaKnown RBP16.21■□□□□ 0.18
PRPF4-201ENST00000374198 HS1BP3Q53T59 392 aa16.2■□□□□ 0.18
PRPF4-201ENST00000374198 GGT6Q6P531 493 aa16.2■□□□□ 0.18
PRPF4-201ENST00000374198 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
PRPF4-201ENST00000374198 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
PRPF4-201ENST00000374198 DYNC1I1O14576 645 aa16.2■□□□□ 0.18
PRPF4-201ENST00000374198 ZNF500O60304 480 aaPredicted RBP16.2■□□□□ 0.18
PRPF4-201ENST00000374198 ADGRL2O95490 1459 aa16.19■□□□□ 0.18
PRPF4-201ENST00000374198 PDE4CQ08493 712 aa16.19■□□□□ 0.18
PRPF4-201ENST00000374198 DMTNQ08495 405 aa16.19■□□□□ 0.18
PRPF4-201ENST00000374198 CCDC146Q8IYE0 955 aa16.19■□□□□ 0.18
PRPF4-201ENST00000374198 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
PRPF4-201ENST00000374198 PRAG1Q86YV5 1406 aa16.18■□□□□ 0.18
PRPF4-201ENST00000374198 RAB3GAP1Q15042 981 aa16.18■□□□□ 0.18
PRPF4-201ENST00000374198 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
PRPF4-201ENST00000374198 PRDM10Q9NQV6 1147 aa16.18■□□□□ 0.18
PRPF4-201ENST00000374198 NUP155O75694 1391 aa16.18■□□□□ 0.18
PRPF4-201ENST00000374198 APAF1O14727 1248 aa16.18■□□□□ 0.18
PRPF4-201ENST00000374198 SMC5Q8IY18 1101 aa16.18■□□□□ 0.18
PRPF4-201ENST00000374198 NOL7Q9UMY1 257 aaKnown RBP16.18■□□□□ 0.18
PRPF4-201ENST00000374198 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
PRPF4-201ENST00000374198 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
PRPF4-201ENST00000374198 KIF3BO15066 747 aa16.17■□□□□ 0.18
PRPF4-201ENST00000374198 GPRASP1Q5JY77 1395 aa16.17■□□□□ 0.18
PRPF4-201ENST00000374198 ARID3AQ99856 593 aa16.17■□□□□ 0.18
PRPF4-201ENST00000374198 ANKRD50Q9ULJ7 1429 aa16.16■□□□□ 0.18
PRPF4-201ENST00000374198 IBTKQ9P2D0 1353 aaPredicted RBP16.16■□□□□ 0.18
PRPF4-201ENST00000374198 RWDD1Q9H446 243 aaPredicted RBP16.16■□□□□ 0.18
PRPF4-201ENST00000374198 KDM5DQ9BY66 1539 aa16.16■□□□□ 0.18
PRPF4-201ENST00000374198 CEBPAP49715 358 aaPredicted RBP16.16■□□□□ 0.18
PRPF4-201ENST00000374198 TMF1P82094 1093 aa16.16■□□□□ 0.18
PRPF4-201ENST00000374198 SNX21Q969T3 373 aa16.16■□□□□ 0.18
PRPF4-201ENST00000374198 MAST1Q9Y2H9 1570 aa16.16■□□□□ 0.18
PRPF4-201ENST00000374198 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
PRPF4-201ENST00000374198 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
PRPF4-201ENST00000374198 CCDC94Q9BW85 323 aaPredicted RBP16.14■□□□□ 0.17
PRPF4-201ENST00000374198 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.14■□□□□ 0.17
PRPF4-201ENST00000374198 KNSTRNQ9Y448 316 aa16.14■□□□□ 0.17
PRPF4-201ENST00000374198 CSPP1Q1MSJ5 1256 aa16.14■□□□□ 0.17
PRPF4-201ENST00000374198 ZSCAN20P17040 1043 aaPredicted RBP16.13■□□□□ 0.17
PRPF4-201ENST00000374198 SHANK2Q9UPX8 1470 aa16.13■□□□□ 0.17
PRPF4-201ENST00000374198 CROCC2H7BZ55 1655 aa16.13■□□□□ 0.17
PRPF4-201ENST00000374198 PIK3C2GO75747 1445 aa16.12■□□□□ 0.17
PRPF4-201ENST00000374198 PRDM15P57071 1507 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms