RNA–Protein interactions for RNA: ENST00000373703.4

PEF1-201, Transcript of penta-EF-hand domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEF1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-201ENST00000373703 HIRIP3Q9BW71 556 aaPredicted RBP20.86■□□□□ 0.93
PEF1-201ENST00000373703 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.85■□□□□ 0.93
PEF1-201ENST00000373703 ST20-MTHFSA0A0A6YYL1 179 aa20.85■□□□□ 0.93
PEF1-201ENST00000373703 C19orf44Q9H6X5 657 aa20.85■□□□□ 0.93
PEF1-201ENST00000373703 ADGRL3Q9HAR2 1447 aa20.84■□□□□ 0.93
PEF1-201ENST00000373703 MSH6P52701 1360 aa20.84■□□□□ 0.93
PEF1-201ENST00000373703 NALCNQ8IZF0 1738 aa20.83■□□□□ 0.92
PEF1-201ENST00000373703 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
PEF1-201ENST00000373703 QRICH2Q9H0J4 1663 aa20.8■□□□□ 0.92
PEF1-201ENST00000373703 HSPA5P11021 654 aaKnown RBP20.8■□□□□ 0.92
PEF1-201ENST00000373703 ATF3P18847 181 aa20.8■□□□□ 0.92
PEF1-201ENST00000373703 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
PEF1-201ENST00000373703 NUTM2FA1L443 756 aa20.77■□□□□ 0.92
PEF1-201ENST00000373703 CADPS2Q86UW7 1296 aa20.77■□□□□ 0.92
PEF1-201ENST00000373703 TESK2Q96S53 571 aa20.77■□□□□ 0.92
PEF1-201ENST00000373703 WASLO00401 505 aaPredicted RBP20.76■□□□□ 0.91
PEF1-201ENST00000373703 DCCP43146 1447 aa20.75■□□□□ 0.91
PEF1-201ENST00000373703 CDK19Q9BWU1 502 aa20.75■□□□□ 0.91
PEF1-201ENST00000373703 ADGRB2O60241 1585 aa20.74■□□□□ 0.91
PEF1-201ENST00000373703 CDC42BPGQ6DT37 1551 aa20.74■□□□□ 0.91
PEF1-201ENST00000373703 SBNO2Q9Y2G9 1366 aa20.74■□□□□ 0.91
PEF1-201ENST00000373703 UBAP1LF5GYI3 381 aa20.74■□□□□ 0.91
PEF1-201ENST00000373703 EVC2Q86UK5 1308 aa20.72■□□□□ 0.91
PEF1-201ENST00000373703 TOM1O60784 492 aa20.72■□□□□ 0.91
PEF1-201ENST00000373703 TULP4Q9NRJ4 1543 aa20.72■□□□□ 0.91
PEF1-201ENST00000373703 SRPK2P78362 688 aaKnown RBP20.71■□□□□ 0.91
PEF1-201ENST00000373703 CABP2Q9NPB3 220 aa20.71■□□□□ 0.91
PEF1-201ENST00000373703 SLAIN2Q9P270 581 aa20.71■□□□□ 0.91
PEF1-201ENST00000373703 MST1RQ04912 1400 aa20.7■□□□□ 0.9
PEF1-201ENST00000373703 TMF1P82094 1093 aa20.69■□□□□ 0.9
PEF1-201ENST00000373703 FMN2Q9NZ56 1722 aa20.69■□□□□ 0.9
PEF1-201ENST00000373703 SLC24A1O60721 1099 aa20.68■□□□□ 0.9
PEF1-201ENST00000373703 PIP4K2BP78356 416 aa20.68■□□□□ 0.9
PEF1-201ENST00000373703 PRR36Q9H6K5 1346 aa20.68■□□□□ 0.9
PEF1-201ENST00000373703 DISP3Q9P2K9 1392 aa20.68■□□□□ 0.9
PEF1-201ENST00000373703 C1orf167Q5SNV9 1468 aa20.67■□□□□ 0.9
PEF1-201ENST00000373703 NUDT16Q96DE0 195 aaKnown RBP20.67■□□□□ 0.9
PEF1-201ENST00000373703 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
PEF1-201ENST00000373703 ESCO1Q5FWF5 840 aa20.66■□□□□ 0.9
PEF1-201ENST00000373703 ORAI2Q96SN7 254 aa20.66■□□□□ 0.9
PEF1-201ENST00000373703 USP32Q8NFA0 1604 aa20.64■□□□□ 0.89
PEF1-201ENST00000373703 ANKARQ7Z5J8 1434 aa20.64■□□□□ 0.89
PEF1-201ENST00000373703 ATP7BP35670 1465 aa20.64■□□□□ 0.89
PEF1-201ENST00000373703 C11orf95C9JLR9 678 aaPredicted RBP20.63■□□□□ 0.89
PEF1-201ENST00000373703 BRINP3Q76B58 766 aa20.62■□□□□ 0.89
PEF1-201ENST00000373703 POLR3GLQ9BT43 218 aa20.62■□□□□ 0.89
PEF1-201ENST00000373703 CCDC61Q9Y6R9 512 aa20.62■□□□□ 0.89
PEF1-201ENST00000373703 RGPD8O14715 1765 aaPredicted RBP20.62■□□□□ 0.89
PEF1-201ENST00000373703 PMFBP1Q8TBY8 1022 aa20.61■□□□□ 0.89
PEF1-201ENST00000373703 CDCA8Q53HL2 280 aa20.6■□□□□ 0.89
PEF1-201ENST00000373703 ATAD2Q6PL18 1390 aa20.6■□□□□ 0.89
PEF1-201ENST00000373703 PUS7Q96PZ0 661 aaKnown RBP20.6■□□□□ 0.89
PEF1-201ENST00000373703 PHF8Q9UPP1 1060 aa20.6■□□□□ 0.89
PEF1-201ENST00000373703 CABP1Q9NZU7 370 aa20.59■□□□□ 0.89
PEF1-201ENST00000373703 PPIP5K1Q6PFW1 1433 aa20.58■□□□□ 0.89
PEF1-201ENST00000373703 ROBO1Q9Y6N7 1651 aa20.58■□□□□ 0.89
PEF1-201ENST00000373703 TMC1Q8TDI8 760 aa20.58■□□□□ 0.89
PEF1-201ENST00000373703 DDX17Q92841 729 aaKnown RBP20.57■□□□□ 0.88
PEF1-201ENST00000373703 FOXO3O43524 673 aa20.56■□□□□ 0.88
PEF1-201ENST00000373703 KIF7Q2M1P5 1343 aa20.55■□□□□ 0.88
PEF1-201ENST00000373703 TOPAZ1Q8N9V7 1692 aa20.55■□□□□ 0.88
PEF1-201ENST00000373703 PLEKHG3A1L390 1219 aa20.55■□□□□ 0.88
PEF1-201ENST00000373703 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
PEF1-201ENST00000373703 FBXO41Q8TF61 875 aa20.55■□□□□ 0.88
PEF1-201ENST00000373703 SLC12A5Q9H2X9 1139 aa20.55■□□□□ 0.88
PEF1-201ENST00000373703 ITSN1Q15811 1721 aa20.54■□□□□ 0.88
PEF1-201ENST00000373703 ACEP12821 1306 aa20.54■□□□□ 0.88
PEF1-201ENST00000373703 XPCQ01831 940 aaPredicted RBP20.53■□□□□ 0.88
PEF1-201ENST00000373703 WASHC2AQ641Q2 1341 aa20.52■□□□□ 0.88
PEF1-201ENST00000373703 KIF1AQ12756 1690 aa20.52■□□□□ 0.87
PEF1-201ENST00000373703 NPHP3Q7Z494 1330 aa20.51■□□□□ 0.87
PEF1-201ENST00000373703 CCDC7Q96M83 1385 aa20.5■□□□□ 0.87
PEF1-201ENST00000373703 PSME1Q06323 249 aa20.5■□□□□ 0.87
PEF1-201ENST00000373703 POLR3AO14802 1390 aaPredicted RBP20.5■□□□□ 0.87
PEF1-201ENST00000373703 NINLQ9Y2I6 1382 aa20.48■□□□□ 0.87
PEF1-201ENST00000373703 KRT28Q7Z3Y7 464 aa20.48■□□□□ 0.87
PEF1-201ENST00000373703 NHSL1Q5SYE7 1610 aa20.47■□□□□ 0.87
PEF1-201ENST00000373703 AHDC1Q5TGY3 1603 aaPredicted RBP20.46■□□□□ 0.87
PEF1-201ENST00000373703 HSPA1LP34931 641 aa20.46■□□□□ 0.87
PEF1-201ENST00000373703 HDGFL2Q7Z4V5 671 aaPredicted RBP20.46■□□□□ 0.87
PEF1-201ENST00000373703 TERF2IPQ9NYB0 399 aa20.46■□□□□ 0.87
PEF1-201ENST00000373703 CD163L1Q9NR16 1453 aa20.46■□□□□ 0.87
PEF1-201ENST00000373703 MYOM1P52179 1685 aa20.46■□□□□ 0.87
PEF1-201ENST00000373703 ZNF692Q9BU19 519 aaPredicted RBP20.45■□□□□ 0.87
PEF1-201ENST00000373703 SOS2Q07890 1332 aaPredicted RBP20.45■□□□□ 0.86
PEF1-201ENST00000373703 A0A1W2PP64 1363 aa20.45■□□□□ 0.86
PEF1-201ENST00000373703 CPSF1Q10570 1443 aaKnown RBP20.45■□□□□ 0.86
PEF1-201ENST00000373703 PXDNQ92626 1479 aa20.44■□□□□ 0.86
PEF1-201ENST00000373703 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
PEF1-201ENST00000373703 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
PEF1-201ENST00000373703 PHLPP1O60346 1717 aa20.44■□□□□ 0.86
PEF1-201ENST00000373703 ANKRD36BQ8N2N9 1353 aa20.43■□□□□ 0.86
PEF1-201ENST00000373703 PAK3O75914 559 aaPredicted RBP20.42■□□□□ 0.86
PEF1-201ENST00000373703 USP6P35125 1406 aa20.42■□□□□ 0.86
PEF1-201ENST00000373703 PANK3Q9H999 370 aa20.42■□□□□ 0.86
PEF1-201ENST00000373703 AKAP12Q02952 1782 aa20.4■□□□□ 0.86
PEF1-201ENST00000373703 COL16A1Q07092 1604 aaPredicted RBP20.4■□□□□ 0.86
PEF1-201ENST00000373703 LMOD2Q6P5Q4 547 aa20.4■□□□□ 0.86
PEF1-201ENST00000373703 LRRC59Q96AG4 307 aaKnown RBP20.4■□□□□ 0.86
PEF1-201ENST00000373703 SBNO1A3KN83 1393 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms