RNA–Protein interactions for RNA: ENST00000373647.8

RABGAP1-202, Transcript of RAB GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGAP1, Length 4,997 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-202ENST00000373647 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
RABGAP1-202ENST00000373647 LRRC7Q96NW7 1537 aa13.57□□□□□ -0.24
RABGAP1-202ENST00000373647 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
RABGAP1-202ENST00000373647 RGPD1P0DJD0 1748 aa13.56□□□□□ -0.24
RABGAP1-202ENST00000373647 COL3A1P02461 1466 aaPredicted RBP13.56□□□□□ -0.24
RABGAP1-202ENST00000373647 CEBPAP49715 358 aaPredicted RBP13.56□□□□□ -0.24
RABGAP1-202ENST00000373647 LMTK3Q96Q04 1460 aa13.56□□□□□ -0.24
RABGAP1-202ENST00000373647 ROBO2Q9HCK4 1378 aa13.56□□□□□ -0.24
RABGAP1-202ENST00000373647 TRPM3Q9HCF6 1732 aaPredicted RBP13.55□□□□□ -0.24
RABGAP1-202ENST00000373647 MYT1LQ9UL68 1186 aa13.55□□□□□ -0.24
RABGAP1-202ENST00000373647 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
RABGAP1-202ENST00000373647 NKTRP30414 1462 aaKnown RBP13.55□□□□□ -0.24
RABGAP1-202ENST00000373647 TMEM132EQ6IEE7 984 aa13.54□□□□□ -0.24
RABGAP1-202ENST00000373647 MAP2P11137 1827 aaKnown RBP13.53□□□□□ -0.24
RABGAP1-202ENST00000373647 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
RABGAP1-202ENST00000373647 CENPJQ9HC77 1338 aaPredicted RBP13.53□□□□□ -0.24
RABGAP1-202ENST00000373647 ZNF326Q5BKZ1 582 aaKnown RBP13.51□□□□□ -0.25
RABGAP1-202ENST00000373647 BLMP54132 1417 aaPredicted RBP13.51□□□□□ -0.25
RABGAP1-202ENST00000373647 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
RABGAP1-202ENST00000373647 NINLQ9Y2I6 1382 aa13.51□□□□□ -0.25
RABGAP1-202ENST00000373647 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
RABGAP1-202ENST00000373647 PEAK1Q9H792 1746 aa13.49□□□□□ -0.25
RABGAP1-202ENST00000373647 ANKRD36BQ8N2N9 1353 aa13.49□□□□□ -0.25
RABGAP1-202ENST00000373647 MLECQ14165 292 aa13.49□□□□□ -0.25
RABGAP1-202ENST00000373647 TBX22Q9Y458 520 aa13.48□□□□□ -0.25
RABGAP1-202ENST00000373647 TMF1P82094 1093 aa13.48□□□□□ -0.25
RABGAP1-202ENST00000373647 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
RABGAP1-202ENST00000373647 MST1RQ04912 1400 aa13.47□□□□□ -0.25
RABGAP1-202ENST00000373647 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.47□□□□□ -0.25
RABGAP1-202ENST00000373647 BRD4O60885 1362 aaPredicted RBP13.47□□□□□ -0.25
RABGAP1-202ENST00000373647 KDM4FA0A1W2PPD8 638 aa13.47□□□□□ -0.25
RABGAP1-202ENST00000373647 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
RABGAP1-202ENST00000373647 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
RABGAP1-202ENST00000373647 A0A1W2PP64 1363 aa13.45□□□□□ -0.26
RABGAP1-202ENST00000373647 NUTM2DQ5VT03 806 aaPredicted RBP13.45□□□□□ -0.26
RABGAP1-202ENST00000373647 IQSEC2Q5JU85 1478 aa13.45□□□□□ -0.26
RABGAP1-202ENST00000373647 PANK3Q9H999 370 aa13.44□□□□□ -0.26
RABGAP1-202ENST00000373647 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
RABGAP1-202ENST00000373647 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
RABGAP1-202ENST00000373647 TRAK1Q9UPV9 953 aa13.44□□□□□ -0.26
RABGAP1-202ENST00000373647 POLR3AO14802 1390 aaPredicted RBP13.42□□□□□ -0.26
RABGAP1-202ENST00000373647 PNPLA6Q8IY17 1366 aa13.42□□□□□ -0.26
RABGAP1-202ENST00000373647 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
RABGAP1-202ENST00000373647 PRAM1Q96QH2 718 aa13.4□□□□□ -0.26
RABGAP1-202ENST00000373647 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
RABGAP1-202ENST00000373647 ANKARQ7Z5J8 1434 aa13.4□□□□□ -0.26
RABGAP1-202ENST00000373647 OVOS2A0A0J9YW53 1432 aa13.39□□□□□ -0.27
RABGAP1-202ENST00000373647 OVOS2Q6IE36 1432 aa13.39□□□□□ -0.27
RABGAP1-202ENST00000373647 NSD2O96028 1365 aa13.39□□□□□ -0.27
RABGAP1-202ENST00000373647 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
RABGAP1-202ENST00000373647 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
RABGAP1-202ENST00000373647 RALBP1Q15311 655 aa13.39□□□□□ -0.27
RABGAP1-202ENST00000373647 NSD3Q9BZ95 1437 aa13.38□□□□□ -0.27
RABGAP1-202ENST00000373647 KIF1AQ12756 1690 aa13.38□□□□□ -0.27
RABGAP1-202ENST00000373647 LMO7Q8WWI1 1683 aa13.38□□□□□ -0.27
RABGAP1-202ENST00000373647 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
RABGAP1-202ENST00000373647 LTN1O94822 1766 aa13.38□□□□□ -0.27
RABGAP1-202ENST00000373647 COL18A1P39060 1754 aa13.38□□□□□ -0.27
RABGAP1-202ENST00000373647 WAPLQ7Z5K2 1190 aa13.37□□□□□ -0.27
RABGAP1-202ENST00000373647 ANP32CO43423 234 aa13.37□□□□□ -0.27
RABGAP1-202ENST00000373647 THEMISQ8N1K5 641 aaPredicted RBP13.37□□□□□ -0.27
RABGAP1-202ENST00000373647 SLC12A5Q9H2X9 1139 aa13.37□□□□□ -0.27
RABGAP1-202ENST00000373647 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
RABGAP1-202ENST00000373647 ZNF521Q96K83 1311 aa13.36□□□□□ -0.27
RABGAP1-202ENST00000373647 CHGAP10645 457 aaKnown RBP13.36□□□□□ -0.27
RABGAP1-202ENST00000373647 NFAT5O94916 1531 aa13.36□□□□□ -0.27
RABGAP1-202ENST00000373647 CDCA8Q53HL2 280 aa13.35□□□□□ -0.27
RABGAP1-202ENST00000373647 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
RABGAP1-202ENST00000373647 EDC4Q6P2E9 1401 aaKnown RBP13.35□□□□□ -0.27
RABGAP1-202ENST00000373647 ADGRL3Q9HAR2 1447 aa13.35□□□□□ -0.27
RABGAP1-202ENST00000373647 NCOA3Q9Y6Q9 1424 aa13.35□□□□□ -0.27
RABGAP1-202ENST00000373647 WASLO00401 505 aaPredicted RBP13.34□□□□□ -0.27
RABGAP1-202ENST00000373647 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.27
RABGAP1-202ENST00000373647 PLEKHG3A1L390 1219 aa13.33□□□□□ -0.28
RABGAP1-202ENST00000373647 NHSL1Q5SYE7 1610 aa13.33□□□□□ -0.28
RABGAP1-202ENST00000373647 SLIT3O75094 1523 aa13.33□□□□□ -0.28
RABGAP1-202ENST00000373647 USP6P35125 1406 aa13.33□□□□□ -0.28
RABGAP1-202ENST00000373647 USP31Q70CQ4 1352 aa13.33□□□□□ -0.28
RABGAP1-202ENST00000373647 PPIP5K1Q6PFW1 1433 aa13.32□□□□□ -0.28
RABGAP1-202ENST00000373647 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
RABGAP1-202ENST00000373647 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
RABGAP1-202ENST00000373647 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
RABGAP1-202ENST00000373647 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
RABGAP1-202ENST00000373647 DCCP43146 1447 aa13.31□□□□□ -0.28
RABGAP1-202ENST00000373647 CDK19Q9BWU1 502 aa13.31□□□□□ -0.28
RABGAP1-202ENST00000373647 NLRP13Q86W25 1043 aa13.3□□□□□ -0.28
RABGAP1-202ENST00000373647 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
RABGAP1-202ENST00000373647 AATKQ6ZMQ8 1374 aa13.3□□□□□ -0.28
RABGAP1-202ENST00000373647 MED1Q15648 1581 aaPredicted RBP13.3□□□□□ -0.28
RABGAP1-202ENST00000373647 RNF123Q5XPI4 1314 aa13.3□□□□□ -0.28
RABGAP1-202ENST00000373647 LTBP4Q8N2S1 1624 aa13.3□□□□□ -0.28
RABGAP1-202ENST00000373647 LRRC37A3O60309 1634 aa13.3□□□□□ -0.28
RABGAP1-202ENST00000373647 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
RABGAP1-202ENST00000373647 FYB1O15117 783 aa13.29□□□□□ -0.28
RABGAP1-202ENST00000373647 RGPD5Q99666 1765 aa13.29□□□□□ -0.28
RABGAP1-202ENST00000373647 NCAPD2Q15021 1401 aa13.29□□□□□ -0.28
RABGAP1-202ENST00000373647 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
RABGAP1-202ENST00000373647 ZBED9Q6R2W3 1325 aa13.28□□□□□ -0.28
RABGAP1-202ENST00000373647 KCNA6P17658 529 aa13.28□□□□□ -0.28
RABGAP1-202ENST00000373647 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms