RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
HDAC8-205ENST00000373568 SLAIN2Q9P270 581 aa18.98■□□□□ 0.63
HDAC8-205ENST00000373568 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
HDAC8-205ENST00000373568 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
HDAC8-205ENST00000373568 ATF3P18847 181 aa18.97■□□□□ 0.63
HDAC8-205ENST00000373568 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
HDAC8-205ENST00000373568 PRAM1Q96QH2 718 aa18.95■□□□□ 0.62
HDAC8-205ENST00000373568 TRAK1Q9UPV9 953 aa18.95■□□□□ 0.62
HDAC8-205ENST00000373568 HSPA1LP34931 641 aa18.94■□□□□ 0.62
HDAC8-205ENST00000373568 C1orf167Q5SNV9 1468 aa18.94■□□□□ 0.62
HDAC8-205ENST00000373568 GPRASP1Q5JY77 1395 aa18.93■□□□□ 0.62
HDAC8-205ENST00000373568 NHSL1Q5SYE7 1610 aa18.93■□□□□ 0.62
HDAC8-205ENST00000373568 AHDC1Q5TGY3 1603 aaPredicted RBP18.93■□□□□ 0.62
HDAC8-205ENST00000373568 RALGAPBQ86X10 1494 aa18.93■□□□□ 0.62
HDAC8-205ENST00000373568 COL16A1Q07092 1604 aaPredicted RBP18.91■□□□□ 0.62
HDAC8-205ENST00000373568 USP32Q8NFA0 1604 aa18.91■□□□□ 0.62
HDAC8-205ENST00000373568 PHLPP1O60346 1717 aa18.91■□□□□ 0.62
HDAC8-205ENST00000373568 BRINP3Q76B58 766 aa18.9■□□□□ 0.62
HDAC8-205ENST00000373568 RGPD8O14715 1765 aaPredicted RBP18.89■□□□□ 0.61
HDAC8-205ENST00000373568 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
HDAC8-205ENST00000373568 ROCK2O75116 1388 aaKnown RBP18.89■□□□□ 0.61
HDAC8-205ENST00000373568 QRICH2Q9H0J4 1663 aa18.89■□□□□ 0.61
HDAC8-205ENST00000373568 SAFB2Q14151 953 aaKnown RBP eCLIP18.88■□□□□ 0.61
HDAC8-205ENST00000373568 POGKQ9P215 609 aa18.88■□□□□ 0.61
HDAC8-205ENST00000373568 TIMELESSQ9UNS1 1208 aa18.87■□□□□ 0.61
HDAC8-205ENST00000373568 MINK1Q8N4C8 1332 aaPredicted RBP18.84■□□□□ 0.61
HDAC8-205ENST00000373568 ORAI2Q96SN7 254 aa18.84■□□□□ 0.61
HDAC8-205ENST00000373568 TULP4Q9NRJ4 1543 aa18.84■□□□□ 0.61
HDAC8-205ENST00000373568 KIF1AQ12756 1690 aa18.83■□□□□ 0.61
HDAC8-205ENST00000373568 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.6
HDAC8-205ENST00000373568 HIRIP3Q9BW71 556 aaPredicted RBP18.82■□□□□ 0.6
HDAC8-205ENST00000373568 CENPJQ9HC77 1338 aaPredicted RBP18.81■□□□□ 0.6
HDAC8-205ENST00000373568 TOPAZ1Q8N9V7 1692 aa18.81■□□□□ 0.6
HDAC8-205ENST00000373568 PRR36Q9H6K5 1346 aa18.8■□□□□ 0.6
HDAC8-205ENST00000373568 ATP7BP35670 1465 aa18.8■□□□□ 0.6
HDAC8-205ENST00000373568 NUTM2FA1L443 756 aa18.8■□□□□ 0.6
HDAC8-205ENST00000373568 WASLO00401 505 aaPredicted RBP18.8■□□□□ 0.6
HDAC8-205ENST00000373568 SHPRHQ149N8 1683 aa18.79■□□□□ 0.6
HDAC8-205ENST00000373568 ITSN1Q15811 1721 aa18.79■□□□□ 0.6
HDAC8-205ENST00000373568 PXDNQ92626 1479 aa18.78■□□□□ 0.6
HDAC8-205ENST00000373568 DDX17Q92841 729 aaKnown RBP18.78■□□□□ 0.6
HDAC8-205ENST00000373568 CARD11Q9BXL7 1154 aa18.78■□□□□ 0.6
HDAC8-205ENST00000373568 EIF3AQ14152 1382 aaKnown RBP18.78■□□□□ 0.6
HDAC8-205ENST00000373568 ESCO1Q5FWF5 840 aa18.77■□□□□ 0.6
HDAC8-205ENST00000373568 SOS2Q07890 1332 aaPredicted RBP18.76■□□□□ 0.59
HDAC8-205ENST00000373568 SBNO2Q9Y2G9 1366 aa18.76■□□□□ 0.59
HDAC8-205ENST00000373568 MED1Q15648 1581 aaPredicted RBP18.76■□□□□ 0.59
HDAC8-205ENST00000373568 JCADQ9P266 1359 aa18.74■□□□□ 0.59
HDAC8-205ENST00000373568 CDK19Q9BWU1 502 aa18.73■□□□□ 0.59
HDAC8-205ENST00000373568 NPHP3Q7Z494 1330 aa18.73■□□□□ 0.59
HDAC8-205ENST00000373568 PHF8Q9UPP1 1060 aa18.72■□□□□ 0.59
HDAC8-205ENST00000373568 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
HDAC8-205ENST00000373568 FOXO3O43524 673 aa18.71■□□□□ 0.59
HDAC8-205ENST00000373568 COL22A1Q8NFW1 1626 aaPredicted RBP18.71■□□□□ 0.58
HDAC8-205ENST00000373568 NUDT16Q96DE0 195 aaKnown RBP18.7■□□□□ 0.58
HDAC8-205ENST00000373568 PNPLA6Q8IY17 1366 aa18.69■□□□□ 0.58
HDAC8-205ENST00000373568 SOCS7O14512 581 aa18.69■□□□□ 0.58
HDAC8-205ENST00000373568 LRP6O75581 1613 aa18.68■□□□□ 0.58
HDAC8-205ENST00000373568 LRRC59Q96AG4 307 aaKnown RBP18.68■□□□□ 0.58
HDAC8-205ENST00000373568 USP47Q96K76 1375 aa18.68■□□□□ 0.58
HDAC8-205ENST00000373568 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
HDAC8-205ENST00000373568 TESK2Q96S53 571 aa18.67■□□□□ 0.58
HDAC8-205ENST00000373568 CABP2Q9NPB3 220 aa18.67■□□□□ 0.58
HDAC8-205ENST00000373568 XPCQ01831 940 aaPredicted RBP18.66■□□□□ 0.58
HDAC8-205ENST00000373568 EVC2Q86UK5 1308 aa18.66■□□□□ 0.58
HDAC8-205ENST00000373568 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
HDAC8-205ENST00000373568 POLR3AO14802 1390 aaPredicted RBP18.66■□□□□ 0.58
HDAC8-205ENST00000373568 CCDC61Q9Y6R9 512 aa18.65■□□□□ 0.58
HDAC8-205ENST00000373568 SPATA31A6Q5VVP1 1343 aa18.65■□□□□ 0.58
HDAC8-205ENST00000373568 ST20-MTHFSA0A0A6YYL1 179 aa18.64■□□□□ 0.57
HDAC8-205ENST00000373568 PLEKHG3A1L390 1219 aa18.64■□□□□ 0.57
HDAC8-205ENST00000373568 SRPK2P78362 688 aaKnown RBP18.64■□□□□ 0.57
HDAC8-205ENST00000373568 KRT28Q7Z3Y7 464 aa18.64■□□□□ 0.57
HDAC8-205ENST00000373568 PPIP5K1Q6PFW1 1433 aa18.64■□□□□ 0.57
HDAC8-205ENST00000373568 SPATA31A3Q5VYP0 1347 aa18.63■□□□□ 0.57
HDAC8-205ENST00000373568 SBNO1A3KN83 1393 aa18.63■□□□□ 0.57
HDAC8-205ENST00000373568 TNS3Q68CZ2 1445 aa18.63■□□□□ 0.57
HDAC8-205ENST00000373568 ABCA3Q99758 1704 aa18.62■□□□□ 0.57
HDAC8-205ENST00000373568 AKAP12Q02952 1782 aa18.62■□□□□ 0.57
HDAC8-205ENST00000373568 CRYBG1Q9Y4K1 1723 aa18.61■□□□□ 0.57
HDAC8-205ENST00000373568 ACEP12821 1306 aa18.6■□□□□ 0.57
HDAC8-205ENST00000373568 ATAD2Q6PL18 1390 aa18.59■□□□□ 0.57
HDAC8-205ENST00000373568 MARF1Q9Y4F3 1742 aaKnown RBP18.58■□□□□ 0.57
HDAC8-205ENST00000373568 PSME1Q06323 249 aa18.58■□□□□ 0.56
HDAC8-205ENST00000373568 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.56
HDAC8-205ENST00000373568 NRKQ7Z2Y5 1582 aa18.58■□□□□ 0.56
HDAC8-205ENST00000373568 MON2Q7Z3U7 1717 aa18.57■□□□□ 0.56
HDAC8-205ENST00000373568 DISP3Q9P2K9 1392 aa18.57■□□□□ 0.56
HDAC8-205ENST00000373568 CABP1Q9NZU7 370 aa18.57■□□□□ 0.56
HDAC8-205ENST00000373568 CD163L1Q9NR16 1453 aa18.57■□□□□ 0.56
HDAC8-205ENST00000373568 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
HDAC8-205ENST00000373568 CPSF1Q10570 1443 aaKnown RBP18.56■□□□□ 0.56
HDAC8-205ENST00000373568 SSH2Q76I76 1423 aa18.56■□□□□ 0.56
HDAC8-205ENST00000373568 USP6P35125 1406 aa18.55■□□□□ 0.56
HDAC8-205ENST00000373568 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
HDAC8-205ENST00000373568 NUTM2BA6NNL0 878 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-205ENST00000373568 NUTM2EB1AL46 878 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-205ENST00000373568 NUTM2AQ8IVF1 878 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-205ENST00000373568 RGS17Q9UGC6 210 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-205ENST00000373568 MYOM1P52179 1685 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms