RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
CSMD2-204ENST00000373380 SLC12A5Q9H2X9 1139 aa13.41□□□□□ -0.26
CSMD2-204ENST00000373380 EIF2S2P20042 333 aaKnown RBP13.4□□□□□ -0.26
CSMD2-204ENST00000373380 KIF16BQ96L93 1317 aa13.4□□□□□ -0.26
CSMD2-204ENST00000373380 ITSN2Q9NZM3 1697 aa13.4□□□□□ -0.26
CSMD2-204ENST00000373380 API5Q9BZZ5 524 aaKnown RBP13.4□□□□□ -0.26
CSMD2-204ENST00000373380 KIF14Q15058 1648 aa13.4□□□□□ -0.26
CSMD2-204ENST00000373380 SKOR2Q2VWA4 1001 aaPredicted RBP13.39□□□□□ -0.27
CSMD2-204ENST00000373380 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
CSMD2-204ENST00000373380 HTATSF1O43719 755 aaKnown RBP13.39□□□□□ -0.27
CSMD2-204ENST00000373380 SKAP1Q86WV1 359 aa13.39□□□□□ -0.27
CSMD2-204ENST00000373380 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
CSMD2-204ENST00000373380 MSH5O43196 834 aa13.39□□□□□ -0.27
CSMD2-204ENST00000373380 REC8O95072 547 aa13.38□□□□□ -0.27
CSMD2-204ENST00000373380 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
CSMD2-204ENST00000373380 ANO2Q9NQ90 1003 aa13.38□□□□□ -0.27
CSMD2-204ENST00000373380 EXOSC9Q06265 439 aaKnown RBP13.38□□□□□ -0.27
CSMD2-204ENST00000373380 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
CSMD2-204ENST00000373380 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
CSMD2-204ENST00000373380 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
CSMD2-204ENST00000373380 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
CSMD2-204ENST00000373380 FKBP5Q13451 457 aaPredicted RBP13.37□□□□□ -0.27
CSMD2-204ENST00000373380 ARHGAP5Q13017 1502 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 CCDC141Q6ZP82 1450 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 TEFQ10587 303 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 TAF7LQ5H9L4 462 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 PZPP20742 1482 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 ATP10BO94823 1461 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 TEX14Q8IWB6 1497 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 PHF14O94880 888 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 GNAI1P63096 354 aa13.36□□□□□ -0.27
CSMD2-204ENST00000373380 KDM6BO15054 1643 aa13.35□□□□□ -0.27
CSMD2-204ENST00000373380 PLEKHH2Q8IVE3 1493 aa13.35□□□□□ -0.27
CSMD2-204ENST00000373380 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
CSMD2-204ENST00000373380 CSPP1Q1MSJ5 1256 aa13.35□□□□□ -0.27
CSMD2-204ENST00000373380 DIAPH3Q9NSV4 1193 aa13.34□□□□□ -0.27
CSMD2-204ENST00000373380 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
CSMD2-204ENST00000373380 ADGRL2O95490 1459 aa13.34□□□□□ -0.27
CSMD2-204ENST00000373380 PDE3AQ14432 1141 aa13.34□□□□□ -0.27
CSMD2-204ENST00000373380 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
CSMD2-204ENST00000373380 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.28
CSMD2-204ENST00000373380 MCTP1Q6DN14 999 aa13.33□□□□□ -0.28
CSMD2-204ENST00000373380 C9orf78Q9NZ63 289 aaPredicted RBP13.33□□□□□ -0.28
CSMD2-204ENST00000373380 NUP160Q12769 1436 aa13.33□□□□□ -0.28
CSMD2-204ENST00000373380 SF3A1Q15459 793 aaKnown RBP13.33□□□□□ -0.28
CSMD2-204ENST00000373380 PRKAR2BP31323 418 aa13.32□□□□□ -0.28
CSMD2-204ENST00000373380 TRAK2O60296 914 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 AAMPQ13685 434 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 TOMM22Q9NS69 142 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 TSPYL4Q9UJ04 414 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 LRRIQ1Q96JM4 1722 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 INTS3Q68E01 1043 aaKnown RBP13.31□□□□□ -0.28
CSMD2-204ENST00000373380 H3BQV1 296 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 C20orf194Q5TEA3 1177 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSMD2-204ENST00000373380 ATP6V1DQ9Y5K8 247 aa13.31□□□□□ -0.28
CSMD2-204ENST00000373380 RALGAPBQ86X10 1494 aa13.3□□□□□ -0.28
CSMD2-204ENST00000373380 FAM184AQ8NB25 1140 aa13.3□□□□□ -0.28
CSMD2-204ENST00000373380 NUCB2P80303 420 aa13.29□□□□□ -0.28
CSMD2-204ENST00000373380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
CSMD2-204ENST00000373380 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
CSMD2-204ENST00000373380 SPATA31E1Q6ZUB1 1445 aa13.29□□□□□ -0.28
CSMD2-204ENST00000373380 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
CSMD2-204ENST00000373380 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
CSMD2-204ENST00000373380 NOB1Q9ULX3 412 aaKnown RBP13.29□□□□□ -0.28
CSMD2-204ENST00000373380 NUTM2GQ5VZR2 741 aa13.28□□□□□ -0.28
CSMD2-204ENST00000373380 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
CSMD2-204ENST00000373380 CDC45O75419 566 aa13.28□□□□□ -0.28
CSMD2-204ENST00000373380 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
CSMD2-204ENST00000373380 RNF214Q8ND24 703 aa13.28□□□□□ -0.28
CSMD2-204ENST00000373380 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
CSMD2-204ENST00000373380 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.28
CSMD2-204ENST00000373380 KIF3AQ9Y496 699 aa13.27□□□□□ -0.28
CSMD2-204ENST00000373380 DENND4BO75064 1496 aaPredicted RBP13.27□□□□□ -0.28
CSMD2-204ENST00000373380 TPM4P67936 248 aa13.27□□□□□ -0.28
CSMD2-204ENST00000373380 CEP170Q5SW79 1584 aa13.27□□□□□ -0.29
CSMD2-204ENST00000373380 BECN2A8MW95 431 aa13.27□□□□□ -0.29
CSMD2-204ENST00000373380 MRE11P49959 708 aa13.27□□□□□ -0.29
CSMD2-204ENST00000373380 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.29
CSMD2-204ENST00000373380 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
CSMD2-204ENST00000373380 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
CSMD2-204ENST00000373380 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
CSMD2-204ENST00000373380 NEXNQ0ZGT2 675 aa13.26□□□□□ -0.29
CSMD2-204ENST00000373380 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
CSMD2-204ENST00000373380 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
CSMD2-204ENST00000373380 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
CSMD2-204ENST00000373380 DHX29Q7Z478 1369 aaKnown RBP13.25□□□□□ -0.29
CSMD2-204ENST00000373380 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
CSMD2-204ENST00000373380 SLFN5Q08AF3 891 aa13.25□□□□□ -0.29
CSMD2-204ENST00000373380 NEK4P51957 841 aa13.25□□□□□ -0.29
CSMD2-204ENST00000373380 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
CSMD2-204ENST00000373380 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
CSMD2-204ENST00000373380 ADGBQ8N7X0 1667 aa13.24□□□□□ -0.29
CSMD2-204ENST00000373380 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
CSMD2-204ENST00000373380 CAVIN1Q6NZI2 390 aaKnown RBP13.24□□□□□ -0.29
CSMD2-204ENST00000373380 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
CSMD2-204ENST00000373380 CABP1Q9NZU7 370 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms