RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 CFAP65Q6ZU64 1925 aaKnown RBP8.57□□□□□ -1.04
CHD6-202ENST00000373222 APBB1O00213 710 aa8.57□□□□□ -1.04
CHD6-202ENST00000373222 LRPPRCP42704 1394 aaKnown RBP8.57□□□□□ -1.04
CHD6-202ENST00000373222 PLCH2O75038 1416 aa8.57□□□□□ -1.04
CHD6-202ENST00000373222 HSP90B1P14625 803 aaKnown RBP8.57□□□□□ -1.04
CHD6-202ENST00000373222 ZC3H15Q8WU90 426 aaKnown RBP8.57□□□□□ -1.04
CHD6-202ENST00000373222 PANK3Q9H999 370 aa8.57□□□□□ -1.04
CHD6-202ENST00000373222 ABCC1P33527 1531 aa8.57□□□□□ -1.04
CHD6-202ENST00000373222 PRDM15P57071 1507 aaPredicted RBP8.56□□□□□ -1.04
CHD6-202ENST00000373222 DUOX2Q9NRD8 1548 aa8.56□□□□□ -1.04
CHD6-202ENST00000373222 RSPH4AQ5TD94 716 aa8.56□□□□□ -1.04
CHD6-202ENST00000373222 GTPBP6O43824 516 aaPredicted RBP8.56□□□□□ -1.04
CHD6-202ENST00000373222 COL17A1Q9UMD9 1497 aaPredicted RBP8.55□□□□□ -1.04
CHD6-202ENST00000373222 CLASP1Q7Z460 1538 aa8.55□□□□□ -1.04
CHD6-202ENST00000373222 RAD21O60216 631 aa8.55□□□□□ -1.04
CHD6-202ENST00000373222 EFCAB2Q5VUJ9 269 aa8.55□□□□□ -1.04
CHD6-202ENST00000373222 RGS22Q8NE09 1264 aa8.55□□□□□ -1.04
CHD6-202ENST00000373222 PARD3Q8TEW0 1356 aa8.55□□□□□ -1.04
CHD6-202ENST00000373222 UGGT1Q9NYU2 1555 aa8.55□□□□□ -1.04
CHD6-202ENST00000373222 GPRASP1Q5JY77 1395 aa8.55□□□□□ -1.04
CHD6-202ENST00000373222 MAGI2Q86UL8 1455 aa8.55□□□□□ -1.04
CHD6-202ENST00000373222 HMGB1P09429 215 aaKnown RBP8.54□□□□□ -1.04
CHD6-202ENST00000373222 MYT1LQ9UL68 1186 aa8.54□□□□□ -1.04
CHD6-202ENST00000373222 SPAG9O60271 1321 aaKnown RBP8.54□□□□□ -1.04
CHD6-202ENST00000373222 BRD4O60885 1362 aaPredicted RBP8.54□□□□□ -1.04
CHD6-202ENST00000373222 KTN1Q86UP2 1357 aaKnown RBP8.54□□□□□ -1.04
CHD6-202ENST00000373222 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
CHD6-202ENST00000373222 RNF123Q5XPI4 1314 aa8.54□□□□□ -1.04
CHD6-202ENST00000373222 SKAP1Q86WV1 359 aa8.54□□□□□ -1.04
CHD6-202ENST00000373222 ZNF428Q96B54 188 aa8.54□□□□□ -1.04
CHD6-202ENST00000373222 CLTCL1P53675 1640 aa8.53□□□□□ -1.04
CHD6-202ENST00000373222 ZFYVE16Q7Z3T8 1539 aa8.53□□□□□ -1.04
CHD6-202ENST00000373222 ATP10AO60312 1499 aa8.53□□□□□ -1.04
CHD6-202ENST00000373222 PLIN1O60240 522 aa8.53□□□□□ -1.04
CHD6-202ENST00000373222 RALBP1Q15311 655 aa8.53□□□□□ -1.04
CHD6-202ENST00000373222 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
CHD6-202ENST00000373222 TTLL13PA6NNM8 815 aa8.53□□□□□ -1.04
CHD6-202ENST00000373222 NLRP13Q86W25 1043 aa8.53□□□□□ -1.04
CHD6-202ENST00000373222 EXOC6Q8TAG9 804 aa8.53□□□□□ -1.04
CHD6-202ENST00000373222 MADDQ8WXG6 1647 aa8.52□□□□□ -1.04
CHD6-202ENST00000373222 RNF17Q9BXT8 1623 aaKnown RBP8.52□□□□□ -1.04
CHD6-202ENST00000373222 ERICH6BQ5W0A0 696 aa8.52□□□□□ -1.05
CHD6-202ENST00000373222 SPHKAPQ2M3C7 1700 aa8.52□□□□□ -1.05
CHD6-202ENST00000373222 KIF3BO15066 747 aa8.51□□□□□ -1.05
CHD6-202ENST00000373222 SCAPERQ9BY12 1400 aa8.51□□□□□ -1.05
CHD6-202ENST00000373222 PUS7Q96PZ0 661 aaKnown RBP8.51□□□□□ -1.05
CHD6-202ENST00000373222 MTMR7Q9Y216 660 aa8.51□□□□□ -1.05
CHD6-202ENST00000373222 CEP152O94986 1710 aa8.5□□□□□ -1.05
CHD6-202ENST00000373222 IQGAP1P46940 1657 aa8.5□□□□□ -1.05
CHD6-202ENST00000373222 WDR7Q9Y4E6 1490 aa8.5□□□□□ -1.05
CHD6-202ENST00000373222 LAMC1P11047 1609 aa8.5□□□□□ -1.05
CHD6-202ENST00000373222 TMF1P82094 1093 aa8.5□□□□□ -1.05
CHD6-202ENST00000373222 TSPYL2Q9H2G4 693 aaPredicted RBP8.5□□□□□ -1.05
CHD6-202ENST00000373222 FANCIQ9NVI1 1328 aa8.5□□□□□ -1.05
CHD6-202ENST00000373222 FANCAO15360 1455 aa8.5□□□□□ -1.05
CHD6-202ENST00000373222 EIF2AK4Q9P2K8 1649 aaKnown RBP8.5□□□□□ -1.05
CHD6-202ENST00000373222 RRP1P56182 461 aaKnown RBP8.49□□□□□ -1.05
CHD6-202ENST00000373222 KCNV2Q8TDN2 545 aa8.49□□□□□ -1.05
CHD6-202ENST00000373222 ADAMTS8Q9UP79 889 aa8.49□□□□□ -1.05
CHD6-202ENST00000373222 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
CHD6-202ENST00000373222 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
CHD6-202ENST00000373222 RCAN3Q9UKA8 241 aa8.49□□□□□ -1.05
CHD6-202ENST00000373222 TRPC6Q9Y210 931 aa8.49□□□□□ -1.05
CHD6-202ENST00000373222 ATP7AQ04656 1500 aa8.48□□□□□ -1.05
CHD6-202ENST00000373222 CFAP70Q5T0N1 1121 aa8.48□□□□□ -1.05
CHD6-202ENST00000373222 UHRF1BP1LA0JNW5 1464 aa8.48□□□□□ -1.05
CHD6-202ENST00000373222 MYOM1P52179 1685 aa8.48□□□□□ -1.05
CHD6-202ENST00000373222 TRPM2O94759 1503 aa8.48□□□□□ -1.05
CHD6-202ENST00000373222 ADGRF5Q8IZF2 1346 aa8.48□□□□□ -1.05
CHD6-202ENST00000373222 DEPDC5O75140 1603 aa8.48□□□□□ -1.05
CHD6-202ENST00000373222 MROH2AA6NES4 1674 aa8.47□□□□□ -1.05
CHD6-202ENST00000373222 MROH1Q8NDA8 1641 aa8.47□□□□□ -1.05
CHD6-202ENST00000373222 INO80Q9ULG1 1556 aaPredicted RBP8.47□□□□□ -1.05
CHD6-202ENST00000373222 ADGRL1O94910 1474 aa8.47□□□□□ -1.05
CHD6-202ENST00000373222 C20orf194Q5TEA3 1177 aa8.47□□□□□ -1.05
CHD6-202ENST00000373222 ABCA9Q8IUA7 1624 aa8.47□□□□□ -1.05
CHD6-202ENST00000373222 CCDC146Q8IYE0 955 aa8.46□□□□□ -1.05
CHD6-202ENST00000373222 MARVELD3Q96A59 401 aa8.46□□□□□ -1.05
CHD6-202ENST00000373222 TET3O43151 1660 aa8.46□□□□□ -1.05
CHD6-202ENST00000373222 PLEKHH1Q9ULM0 1364 aa8.46□□□□□ -1.06
CHD6-202ENST00000373222 PPP2R1AP30153 589 aa8.46□□□□□ -1.06
CHD6-202ENST00000373222 NUTM2DQ5VT03 806 aaPredicted RBP8.46□□□□□ -1.06
CHD6-202ENST00000373222 SGIP1Q9BQI5 828 aa8.46□□□□□ -1.06
CHD6-202ENST00000373222 MKRN3Q13064 507 aaKnown RBP8.45□□□□□ -1.06
CHD6-202ENST00000373222 FOXD4L5Q5VV16 416 aaPredicted RBP8.45□□□□□ -1.06
CHD6-202ENST00000373222 FOXD4L4Q8WXT5 416 aaPredicted RBP8.45□□□□□ -1.06
CHD6-202ENST00000373222 TRIM35Q9UPQ4 493 aa8.45□□□□□ -1.06
CHD6-202ENST00000373222 PTPRTO14522 1441 aa8.45□□□□□ -1.06
CHD6-202ENST00000373222 KIDINS220Q9ULH0 1771 aa8.45□□□□□ -1.06
CHD6-202ENST00000373222 BLMP54132 1417 aaPredicted RBP8.45□□□□□ -1.06
CHD6-202ENST00000373222 ASXL2Q76L83 1435 aa8.45□□□□□ -1.06
CHD6-202ENST00000373222 KNSTRNQ9Y448 316 aa8.45□□□□□ -1.06
CHD6-202ENST00000373222 ABCA6Q8N139 1617 aa8.45□□□□□ -1.06
CHD6-202ENST00000373222 MAP3K13O43283 966 aa8.44□□□□□ -1.06
CHD6-202ENST00000373222 PLCG2P16885 1265 aa8.44□□□□□ -1.06
CHD6-202ENST00000373222 RBM25P49756 843 aaKnown RBP8.44□□□□□ -1.06
CHD6-202ENST00000373222 IL27Q8NEV9 243 aa8.44□□□□□ -1.06
CHD6-202ENST00000373222 PPRC1Q5VV67 1664 aaKnown RBP8.44□□□□□ -1.06
CHD6-202ENST00000373222 SCAF11Q99590 1463 aaKnown RBP8.44□□□□□ -1.06
CHD6-202ENST00000373222 EMP3P54852 163 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms