RNA–Protein interactions for RNA: ENST00000372597.5

SCMH1-207, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,252 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-207ENST00000372597 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
SCMH1-207ENST00000372597 ATP7AQ04656 1500 aa13.64□□□□□ -0.23
SCMH1-207ENST00000372597 SEC24BO95487 1268 aa13.64□□□□□ -0.23
SCMH1-207ENST00000372597 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
SCMH1-207ENST00000372597 TNNQ9UQP3 1299 aa13.64□□□□□ -0.23
SCMH1-207ENST00000372597 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
SCMH1-207ENST00000372597 RLBP1P12271 317 aa13.63□□□□□ -0.23
SCMH1-207ENST00000372597 STK26Q9P289 416 aa13.63□□□□□ -0.23
SCMH1-207ENST00000372597 PCDHB15Q9Y5E8 787 aa13.63□□□□□ -0.23
SCMH1-207ENST00000372597 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
SCMH1-207ENST00000372597 TET3O43151 1660 aa13.62□□□□□ -0.23
SCMH1-207ENST00000372597 CEP152O94986 1710 aa13.62□□□□□ -0.23
SCMH1-207ENST00000372597 UHRF1BP1LA0JNW5 1464 aa13.62□□□□□ -0.23
SCMH1-207ENST00000372597 EVC2Q86UK5 1308 aa13.62□□□□□ -0.23
SCMH1-207ENST00000372597 SRPK2P78362 688 aaKnown RBP13.61□□□□□ -0.23
SCMH1-207ENST00000372597 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
SCMH1-207ENST00000372597 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
SCMH1-207ENST00000372597 SPRYD3Q8NCJ5 442 aa13.61□□□□□ -0.23
SCMH1-207ENST00000372597 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
SCMH1-207ENST00000372597 AAMPQ13685 434 aa13.6□□□□□ -0.23
SCMH1-207ENST00000372597 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
SCMH1-207ENST00000372597 TSR2Q969E8 191 aaKnown RBP13.59□□□□□ -0.23
SCMH1-207ENST00000372597 MYOM2P54296 1465 aa13.59□□□□□ -0.23
SCMH1-207ENST00000372597 ARXQ96QS3 562 aa13.59□□□□□ -0.23
SCMH1-207ENST00000372597 ANO8Q9HCE9 1232 aaPredicted RBP13.59□□□□□ -0.23
SCMH1-207ENST00000372597 DZIP1LQ8IYY4 767 aaKnown RBP13.59□□□□□ -0.23
SCMH1-207ENST00000372597 MAP3K4Q9Y6R4 1608 aa13.59□□□□□ -0.23
SCMH1-207ENST00000372597 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.23
SCMH1-207ENST00000372597 MYOM1P52179 1685 aa13.58□□□□□ -0.23
SCMH1-207ENST00000372597 ITPRIPQ8IWB1 547 aa13.58□□□□□ -0.24
SCMH1-207ENST00000372597 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
SCMH1-207ENST00000372597 ABCA6Q8N139 1617 aa13.57□□□□□ -0.24
SCMH1-207ENST00000372597 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
SCMH1-207ENST00000372597 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
SCMH1-207ENST00000372597 USP19O94966 1318 aa13.57□□□□□ -0.24
SCMH1-207ENST00000372597 MFAP1P55081 439 aaKnown RBP13.56□□□□□ -0.24
SCMH1-207ENST00000372597 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
SCMH1-207ENST00000372597 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.56□□□□□ -0.24
SCMH1-207ENST00000372597 CFAP65Q6ZU64 1925 aaKnown RBP13.56□□□□□ -0.24
SCMH1-207ENST00000372597 POGKQ9P215 609 aa13.55□□□□□ -0.24
SCMH1-207ENST00000372597 ARAP3Q8WWN8 1544 aa13.55□□□□□ -0.24
SCMH1-207ENST00000372597 CCDC27Q2M243 656 aa13.54□□□□□ -0.24
SCMH1-207ENST00000372597 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
SCMH1-207ENST00000372597 KIF1BO60333 1816 aa13.54□□□□□ -0.24
SCMH1-207ENST00000372597 KIAA1210Q9ULL0 1709 aa13.54□□□□□ -0.24
SCMH1-207ENST00000372597 ASXL2Q76L83 1435 aa13.53□□□□□ -0.24
SCMH1-207ENST00000372597 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
SCMH1-207ENST00000372597 TBC1D32Q96NH3 1257 aa13.53□□□□□ -0.24
SCMH1-207ENST00000372597 MINK1Q8N4C8 1332 aaPredicted RBP13.53□□□□□ -0.24
SCMH1-207ENST00000372597 EFCAB6Q5THR3 1501 aa13.52□□□□□ -0.24
SCMH1-207ENST00000372597 TBC1D2Q9BYX2 928 aa13.52□□□□□ -0.24
SCMH1-207ENST00000372597 TERF2IPQ9NYB0 399 aa13.52□□□□□ -0.24
SCMH1-207ENST00000372597 EIF5BO60841 1220 aaKnown RBP13.52□□□□□ -0.25
SCMH1-207ENST00000372597 TMPOP42166 694 aaKnown RBP13.52□□□□□ -0.25
SCMH1-207ENST00000372597 RIPK4P57078 832 aa13.52□□□□□ -0.25
SCMH1-207ENST00000372597 PHF23Q9BUL5 403 aaPredicted RBP13.52□□□□□ -0.25
SCMH1-207ENST00000372597 DDX19BQ9UMR2 479 aa13.52□□□□□ -0.25
SCMH1-207ENST00000372597 VWDEQ8N2E2 1590 aa13.51□□□□□ -0.25
SCMH1-207ENST00000372597 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
SCMH1-207ENST00000372597 NPATQ14207 1427 aa13.51□□□□□ -0.25
SCMH1-207ENST00000372597 INO80Q9ULG1 1556 aaPredicted RBP13.51□□□□□ -0.25
SCMH1-207ENST00000372597 TRIM27P14373 513 aa13.51□□□□□ -0.25
SCMH1-207ENST00000372597 C22orf23Q9BZE7 217 aa13.51□□□□□ -0.25
SCMH1-207ENST00000372597 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
SCMH1-207ENST00000372597 ANKRD36BQ8N2N9 1353 aa13.51□□□□□ -0.25
SCMH1-207ENST00000372597 IPO8O15397 1037 aaKnown RBP13.5□□□□□ -0.25
SCMH1-207ENST00000372597 ZNF518AQ6AHZ1 1483 aa13.5□□□□□ -0.25
SCMH1-207ENST00000372597 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
SCMH1-207ENST00000372597 NOB1Q9ULX3 412 aaKnown RBP13.5□□□□□ -0.25
SCMH1-207ENST00000372597 ATF7IPQ6VMQ6 1270 aa13.5□□□□□ -0.25
SCMH1-207ENST00000372597 RAPGEF3O95398 923 aa13.49□□□□□ -0.25
SCMH1-207ENST00000372597 CT47B1P0C2W7 299 aaPredicted RBP13.49□□□□□ -0.25
SCMH1-207ENST00000372597 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
SCMH1-207ENST00000372597 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
SCMH1-207ENST00000372597 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
SCMH1-207ENST00000372597 NSD2O96028 1365 aa13.48□□□□□ -0.25
SCMH1-207ENST00000372597 HSCBQ8IWL3 235 aa13.48□□□□□ -0.25
SCMH1-207ENST00000372597 IDI1Q13907 227 aa13.47□□□□□ -0.25
SCMH1-207ENST00000372597 L1TD1Q5T7N2 865 aaKnown RBP13.47□□□□□ -0.25
SCMH1-207ENST00000372597 TMEM57Q8N5G2 664 aa13.47□□□□□ -0.25
SCMH1-207ENST00000372597 PRAM1Q96QH2 718 aa13.47□□□□□ -0.25
SCMH1-207ENST00000372597 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
SCMH1-207ENST00000372597 NRXN1Q9ULB1 1477 aa13.47□□□□□ -0.25
SCMH1-207ENST00000372597 CD109Q6YHK3 1445 aa13.47□□□□□ -0.25
SCMH1-207ENST00000372597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.47□□□□□ -0.254e-7■■■□□ 18.7
SCMH1-207ENST00000372597 NEURL4Q96JN8 1562 aa13.46□□□□□ -0.25
SCMH1-207ENST00000372597 PUS7Q96PZ0 661 aaKnown RBP13.46□□□□□ -0.25
SCMH1-207ENST00000372597 LNPKQ9C0E8 428 aa13.46□□□□□ -0.25
SCMH1-207ENST00000372597 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.25
SCMH1-207ENST00000372597 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.25
SCMH1-207ENST00000372597 HSP90AA1P07900 732 aaKnown RBP13.45□□□□□ -0.26
SCMH1-207ENST00000372597 ADGRB3O60242 1522 aa13.45□□□□□ -0.26
SCMH1-207ENST00000372597 MROH2AA6NES4 1674 aa13.45□□□□□ -0.26
SCMH1-207ENST00000372597 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
SCMH1-207ENST00000372597 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
SCMH1-207ENST00000372597 A0A1W2PP64 1363 aa13.45□□□□□ -0.26
SCMH1-207ENST00000372597 FYB1O15117 783 aa13.45□□□□□ -0.26
SCMH1-207ENST00000372597 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
SCMH1-207ENST00000372597 IQSEC2Q5JU85 1478 aa13.44□□□□□ -0.26
SCMH1-207ENST00000372597 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms