RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 ATAD2Q6PL18 1390 aa31.61■■■□□ 2.65
SNX21-204ENST00000372542 POGKQ9P215 609 aa31.61■■■□□ 2.65
SNX21-204ENST00000372542 IRX6P78412 446 aaPredicted RBP31.61■■■□□ 2.65
SNX21-204ENST00000372542 PRAM1Q96QH2 718 aa31.61■■■□□ 2.65
SNX21-204ENST00000372542 NSD2O96028 1365 aa31.6■■■□□ 2.65
SNX21-204ENST00000372542 CGNL1Q0VF96 1302 aa31.59■■■□□ 2.65
SNX21-204ENST00000372542 CABP2Q9NPB3 220 aa31.57■■■□□ 2.64
SNX21-204ENST00000372542 PPP4R2Q9NY27 417 aa31.57■■■□□ 2.64
SNX21-204ENST00000372542 NRXN3Q9Y4C0 1643 aa31.57■■■□□ 2.64
SNX21-204ENST00000372542 SENP3-EIF4A1A0A087X0R7 540 aa31.56■■■□□ 2.64
SNX21-204ENST00000372542 SAFB2Q14151 953 aaKnown RBP eCLIP31.56■■■□□ 2.64
SNX21-204ENST00000372542 POLR3AO14802 1390 aaPredicted RBP31.56■■■□□ 2.64
SNX21-204ENST00000372542 MORC1Q86VD1 984 aa31.56■■■□□ 2.64
SNX21-204ENST00000372542 UBR1Q8IWV7 1749 aa31.55■■■□□ 2.64
SNX21-204ENST00000372542 SRPK2P78362 688 aaKnown RBP31.54■■■□□ 2.64
SNX21-204ENST00000372542 ABCC11Q96J66 1382 aa31.54■■■□□ 2.64
SNX21-204ENST00000372542 SENP3Q9H4L4 574 aaPredicted RBP31.54■■■□□ 2.64
SNX21-204ENST00000372542 MINK1Q8N4C8 1332 aaPredicted RBP31.52■■■□□ 2.64
SNX21-204ENST00000372542 NLRP1Q9C000 1473 aa31.51■■■□□ 2.64
SNX21-204ENST00000372542 SALL2Q9Y467 1007 aaPredicted RBP31.51■■■□□ 2.63
SNX21-204ENST00000372542 KNDC1Q76NI1 1749 aa31.48■■■□□ 2.63
SNX21-204ENST00000372542 TMEM2Q9UHN6 1383 aa31.48■■■□□ 2.63
SNX21-204ENST00000372542 TERF2IPQ9NYB0 399 aa31.47■■■□□ 2.63
SNX21-204ENST00000372542 A0A1W2PP64 1363 aa31.46■■■□□ 2.63
SNX21-204ENST00000372542 SIRT1Q96EB6 747 aa31.44■■■□□ 2.62
SNX21-204ENST00000372542 NGEFQ8N5V2 710 aa31.43■■■□□ 2.62
SNX21-204ENST00000372542 CDK19Q9BWU1 502 aa31.43■■■□□ 2.62
SNX21-204ENST00000372542 RCAN3Q9UKA8 241 aa31.42■■■□□ 2.62
SNX21-204ENST00000372542 TECPR2O15040 1411 aa31.42■■■□□ 2.62
SNX21-204ENST00000372542 C3P01024 1663 aa31.41■■■□□ 2.62
SNX21-204ENST00000372542 FER1L4A9Z1Z3 1794 aa31.4■■■□□ 2.62
SNX21-204ENST00000372542 FAM135BQ49AJ0 1406 aa31.4■■■□□ 2.62
SNX21-204ENST00000372542 MED14O60244 1454 aa31.4■■■□□ 2.62
SNX21-204ENST00000372542 METP08581 1390 aa31.4■■■□□ 2.62
SNX21-204ENST00000372542 CD163L1Q9NR16 1453 aa31.4■■■□□ 2.62
SNX21-204ENST00000372542 CDCA7LQ96GN5 454 aa31.4■■■□□ 2.62
SNX21-204ENST00000372542 ANKRD26Q9UPS8 1709 aa31.4■■■□□ 2.62
SNX21-204ENST00000372542 SHPRHQ149N8 1683 aa31.39■■■□□ 2.61
SNX21-204ENST00000372542 HDGFL2Q7Z4V5 671 aaPredicted RBP31.38■■■□□ 2.61
SNX21-204ENST00000372542 ZNF521Q96K83 1311 aa31.38■■■□□ 2.61
SNX21-204ENST00000372542 PLEKHH1Q9ULM0 1364 aa31.38■■■□□ 2.61
SNX21-204ENST00000372542 CPS1P31327 1500 aa31.38■■■□□ 2.61
SNX21-204ENST00000372542 CFAP53Q96M91 514 aa31.38■■■□□ 2.61
SNX21-204ENST00000372542 TRHP20396 242 aaPredicted RBP31.36■■■□□ 2.61
SNX21-204ENST00000372542 WAPLQ7Z5K2 1190 aa31.35■■■□□ 2.61
SNX21-204ENST00000372542 ATP7BP35670 1465 aa31.35■■■□□ 2.61
SNX21-204ENST00000372542 PLEKHG1Q9ULL1 1385 aa31.35■■■□□ 2.61
SNX21-204ENST00000372542 RRP1P56182 461 aaKnown RBP31.35■■■□□ 2.61
SNX21-204ENST00000372542 TSHZ2Q9NRE2 1034 aa31.35■■■□□ 2.61
SNX21-204ENST00000372542 TNNT2P45379 298 aaPredicted RBP31.33■■■□□ 2.61
SNX21-204ENST00000372542 MTHFSP49914 203 aa31.31■■■□□ 2.6
SNX21-204ENST00000372542 GOLGA2Q08379 1002 aa31.31■■■□□ 2.6
SNX21-204ENST00000372542 CCDC146Q8IYE0 955 aa31.31■■■□□ 2.6
SNX21-204ENST00000372542 ADAMTS13Q76LX8 1427 aa31.3■■■□□ 2.6
SNX21-204ENST00000372542 KIF20BQ96Q89 1820 aa31.29■■■□□ 2.6
SNX21-204ENST00000372542 SLIT1O75093 1534 aa31.29■■■□□ 2.6
SNX21-204ENST00000372542 CABP1Q9NZU7 370 aa31.28■■■□□ 2.6
SNX21-204ENST00000372542 WASLO00401 505 aaPredicted RBP31.28■■■□□ 2.6
SNX21-204ENST00000372542 APAF1O14727 1248 aa31.28■■■□□ 2.6
SNX21-204ENST00000372542 CEBPAP49715 358 aaPredicted RBP31.28■■■□□ 2.6
SNX21-204ENST00000372542 ARHGAP23Q9P227 1491 aa31.27■■■□□ 2.6
SNX21-204ENST00000372542 EID1Q9Y6B2 187 aa31.26■■■□□ 2.59
SNX21-204ENST00000372542 FYB1O15117 783 aa31.25■■■□□ 2.59
SNX21-204ENST00000372542 TXNDC2Q86VQ3 553 aa31.25■■■□□ 2.59
SNX21-204ENST00000372542 DUSP27Q5VZP5 1158 aa31.24■■■□□ 2.59
SNX21-204ENST00000372542 B4GALNT3Q6L9W6 998 aa31.24■■■□□ 2.59
SNX21-204ENST00000372542 SLFN5Q08AF3 891 aa31.22■■■□□ 2.59
SNX21-204ENST00000372542 RUNDC1Q96C34 613 aa31.22■■■□□ 2.59
SNX21-204ENST00000372542 GGNBP2Q9H3C7 697 aa31.22■■■□□ 2.59
SNX21-204ENST00000372542 LTKP29376 864 aa31.21■■■□□ 2.59
SNX21-204ENST00000372542 TRMT2AQ8IZ69 625 aaKnown RBP31.2■■■□□ 2.59
SNX21-204ENST00000372542 ADGRB2O60241 1585 aa31.2■■■□□ 2.58
SNX21-204ENST00000372542 CPSF1Q10570 1443 aaKnown RBP31.19■■■□□ 2.58
SNX21-204ENST00000372542 NCBP3Q53F19 620 aaKnown RBP31.18■■■□□ 2.58
SNX21-204ENST00000372542 PPIP5K1Q6PFW1 1433 aa31.18■■■□□ 2.58
SNX21-204ENST00000372542 IQSEC2Q5JU85 1478 aa31.18■■■□□ 2.58
SNX21-204ENST00000372542 E9PSI1 815 aa31.17■■■□□ 2.58
SNX21-204ENST00000372542 THEMISQ8N1K5 641 aaPredicted RBP31.17■■■□□ 2.58
SNX21-204ENST00000372542 CDC42BPGQ6DT37 1551 aa31.16■■■□□ 2.58
SNX21-204ENST00000372542 EDC4Q6P2E9 1401 aaKnown RBP31.16■■■□□ 2.58
SNX21-204ENST00000372542 DIP2AQ14689 1571 aa31.16■■■□□ 2.58
SNX21-204ENST00000372542 ROBO2Q9HCK4 1378 aa31.15■■■□□ 2.58
SNX21-204ENST00000372542 CCDC136Q96JN2 1154 aa31.14■■■□□ 2.58
SNX21-204ENST00000372542 NUDT16Q96DE0 195 aaKnown RBP31.14■■■□□ 2.58
SNX21-204ENST00000372542 COL3A1P02461 1466 aaPredicted RBP31.14■■■□□ 2.58
SNX21-204ENST00000372542 CCDC61Q9Y6R9 512 aa31.13■■■□□ 2.57
SNX21-204ENST00000372542 MON2Q7Z3U7 1717 aa31.12■■■□□ 2.57
SNX21-204ENST00000372542 TBX22Q9Y458 520 aa31.12■■■□□ 2.57
SNX21-204ENST00000372542 NKTRP30414 1462 aaKnown RBP31.11■■■□□ 2.57
SNX21-204ENST00000372542 AKAP12Q02952 1782 aa31.1■■■□□ 2.57
SNX21-204ENST00000372542 ITSN1Q15811 1721 aa31.1■■■□□ 2.57
SNX21-204ENST00000372542 CCDC27Q2M243 656 aa31.09■■■□□ 2.57
SNX21-204ENST00000372542 WWC1Q8IX03 1113 aa31.09■■■□□ 2.57
SNX21-204ENST00000372542 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.09■■■□□ 2.57
SNX21-204ENST00000372542 U2AF1L5P0DN76 240 aaPredicted RBP31.08■■■□□ 2.57
SNX21-204ENST00000372542 U2AF1Q01081 240 aaKnown RBP eCLIP31.08■■■□□ 2.57
SNX21-204ENST00000372542 TCP11L2Q8N4U5 519 aa31.08■■■□□ 2.57
SNX21-204ENST00000372542 PNPLA6Q8IY17 1366 aa31.08■■■□□ 2.57
SNX21-204ENST00000372542 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
SNX21-204ENST00000372542 PTPRUQ92729 1446 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms