RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 LRRFIP1Q32MZ4 808 aaKnown RBP28.99■■■□□ 2.23
RAPGEF1-203ENST00000372195 TCEAL9Q9UHQ7 104 aa28.99■■■□□ 2.23
RAPGEF1-203ENST00000372195 BRPF3Q9ULD4 1205 aa28.99■■■□□ 2.23
RAPGEF1-203ENST00000372195 NUCB2P80303 420 aa28.99■■■□□ 2.23
RAPGEF1-203ENST00000372195 GPS2Q13227 327 aa28.99■■■□□ 2.23
RAPGEF1-203ENST00000372195 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.99■■■□□ 2.23
RAPGEF1-203ENST00000372195 WASHC4Q2M389 1173 aa28.98■■■□□ 2.23
RAPGEF1-203ENST00000372195 CHMP4CQ96CF2 233 aa28.98■■■□□ 2.23
RAPGEF1-203ENST00000372195 CDC45O75419 566 aa28.97■■■□□ 2.23
RAPGEF1-203ENST00000372195 ERICH2A1L162 156 aa28.95■■■□□ 2.23
RAPGEF1-203ENST00000372195 FANCD2Q9BXW9 1451 aa28.95■■■□□ 2.22
RAPGEF1-203ENST00000372195 NAP1L1P55209 391 aaKnown RBP28.95■■■□□ 2.22
RAPGEF1-203ENST00000372195 NASPP49321 788 aaPredicted RBP28.95■■■□□ 2.22
RAPGEF1-203ENST00000372195 CAVIN1Q6NZI2 390 aaKnown RBP28.95■■■□□ 2.22
RAPGEF1-203ENST00000372195 CYB5RLQ6IPT4 315 aa28.94■■■□□ 2.22
RAPGEF1-203ENST00000372195 MTHFSP49914 203 aa28.94■■■□□ 2.22
RAPGEF1-203ENST00000372195 PDILTQ8N807 584 aa28.94■■■□□ 2.22
RAPGEF1-203ENST00000372195 FGD6Q6ZV73 1430 aa28.93■■■□□ 2.22
RAPGEF1-203ENST00000372195 IPO7O95373 1038 aaKnown RBP28.93■■■□□ 2.22
RAPGEF1-203ENST00000372195 UBTFL1P0CB47 393 aaPredicted RBP28.93■■■□□ 2.22
RAPGEF1-203ENST00000372195 ERC2O15083 957 aa28.92■■■□□ 2.22
RAPGEF1-203ENST00000372195 TTLL5Q6EMB2 1281 aa28.92■■■□□ 2.22
RAPGEF1-203ENST00000372195 ANKRD20A12PQ8NF67 263 aa28.92■■■□□ 2.22
RAPGEF1-203ENST00000372195 PDZRN3Q9UPQ7 1066 aa28.92■■■□□ 2.22
RAPGEF1-203ENST00000372195 CCDC73Q6ZRK6 1079 aa28.92■■■□□ 2.22
RAPGEF1-203ENST00000372195 IL27Q8NEV9 243 aa28.92■■■□□ 2.22
RAPGEF1-203ENST00000372195 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
RAPGEF1-203ENST00000372195 HOOK1Q9UJC3 728 aaKnown RBP28.91■■■□□ 2.22
RAPGEF1-203ENST00000372195 TRAK2O60296 914 aa28.91■■■□□ 2.22
RAPGEF1-203ENST00000372195 CTDP1Q9Y5B0 961 aaPredicted RBP28.91■■■□□ 2.22
RAPGEF1-203ENST00000372195 CCDC47Q96A33 483 aaKnown RBP28.9■■■□□ 2.22
RAPGEF1-203ENST00000372195 AKNAQ7Z591 1439 aa28.9■■■□□ 2.22
RAPGEF1-203ENST00000372195 BCAR3O75815 825 aa28.9■■■□□ 2.22
RAPGEF1-203ENST00000372195 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
RAPGEF1-203ENST00000372195 TEX35Q5T0J7 233 aa28.89■■■□□ 2.21
RAPGEF1-203ENST00000372195 DNAJC2Q99543 621 aaKnown RBP28.89■■■□□ 2.21
RAPGEF1-203ENST00000372195 RAD54L2Q9Y4B4 1467 aa28.89■■■□□ 2.21
RAPGEF1-203ENST00000372195 TCP11L2Q8N4U5 519 aa28.89■■■□□ 2.21
RAPGEF1-203ENST00000372195 TSR2Q969E8 191 aaKnown RBP28.88■■■□□ 2.21
RAPGEF1-203ENST00000372195 FAM177BA6PVY3 158 aa28.88■■■□□ 2.21
RAPGEF1-203ENST00000372195 PRPF40AO75400 957 aaKnown RBP28.88■■■□□ 2.21
RAPGEF1-203ENST00000372195 EXOSC9Q06265 439 aaKnown RBP28.88■■■□□ 2.21
RAPGEF1-203ENST00000372195 MYOM3Q5VTT5 1437 aa28.88■■■□□ 2.21
RAPGEF1-203ENST00000372195 NOB1Q9ULX3 412 aaKnown RBP28.87■■■□□ 2.21
RAPGEF1-203ENST00000372195 MAP4K4O95819 1239 aaPredicted RBP28.87■■■□□ 2.21
RAPGEF1-203ENST00000372195 FSD1Q9BTV5 496 aa28.86■■■□□ 2.21
RAPGEF1-203ENST00000372195 CEBPZQ03701 1054 aaKnown RBP28.86■■■□□ 2.21
RAPGEF1-203ENST00000372195 MNS1Q8NEH6 495 aa28.86■■■□□ 2.21
RAPGEF1-203ENST00000372195 PPP2R1AP30153 589 aa28.85■■■□□ 2.21
RAPGEF1-203ENST00000372195 RALYLQ86SE5 291 aaKnown RBP28.85■■■□□ 2.21
RAPGEF1-203ENST00000372195 MPNDQ8N594 471 aa28.85■■■□□ 2.21
RAPGEF1-203ENST00000372195 RBM10P98175 930 aaKnown RBP28.85■■■□□ 2.21
RAPGEF1-203ENST00000372195 CNTROBQ8N137 903 aa28.84■■■□□ 2.21
RAPGEF1-203ENST00000372195 KIF21BO75037 1637 aa28.83■■■□□ 2.21
RAPGEF1-203ENST00000372195 CCDC39Q9UFE4 941 aa28.83■■■□□ 2.21
RAPGEF1-203ENST00000372195 SURF6O75683 361 aaKnown RBP28.82■■■□□ 2.2
RAPGEF1-203ENST00000372195 NEK4P51957 841 aa28.82■■■□□ 2.2
RAPGEF1-203ENST00000372195 SAFBQ15424 915 aaKnown RBP eCLIP28.82■■■□□ 2.2
RAPGEF1-203ENST00000372195 NLRP2Q9NX02 1062 aa28.82■■■□□ 2.2
RAPGEF1-203ENST00000372195 HSP90AB4PQ58FF6 505 aa28.82■■■□□ 2.2
RAPGEF1-203ENST00000372195 MRE11P49959 708 aa28.82■■■□□ 2.2
RAPGEF1-203ENST00000372195 ATP2B1P20020 1258 aa28.81■■■□□ 2.2
RAPGEF1-203ENST00000372195 NINLQ9Y2I6 1382 aa28.81■■■□□ 2.2
RAPGEF1-203ENST00000372195 BRD4O60885 1362 aaPredicted RBP28.81■■■□□ 2.2
RAPGEF1-203ENST00000372195 STK11IPQ8N1F8 1099 aa28.81■■■□□ 2.2
RAPGEF1-203ENST00000372195 RAPGEF4Q8WZA2 1011 aa28.81■■■□□ 2.2
RAPGEF1-203ENST00000372195 CFAP70Q5T0N1 1121 aa28.81■■■□□ 2.2
RAPGEF1-203ENST00000372195 SPC24Q8NBT2 197 aa28.8■■■□□ 2.2
RAPGEF1-203ENST00000372195 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.8■■■□□ 2.2
RAPGEF1-203ENST00000372195 PRKAR2BP31323 418 aa28.8■■■□□ 2.2
RAPGEF1-203ENST00000372195 FMNL2Q96PY5 1086 aa28.8■■■□□ 2.2
RAPGEF1-203ENST00000372195 FGD5Q6ZNL6 1462 aa28.79■■■□□ 2.2
RAPGEF1-203ENST00000372195 SDF4Q9BRK5 362 aa28.79■■■□□ 2.2
RAPGEF1-203ENST00000372195 NBPF1Q3BBV0 1214 aa28.79■■■□□ 2.2
RAPGEF1-203ENST00000372195 OLFM4Q6UX06 510 aa28.79■■■□□ 2.2
RAPGEF1-203ENST00000372195 SKIDA1Q1XH10 827 aa28.79■■■□□ 2.2
RAPGEF1-203ENST00000372195 LRRC9Q6ZRR7 1453 aa28.79■■■□□ 2.2
RAPGEF1-203ENST00000372195 SMC2O95347 1197 aa28.78■■■□□ 2.2
RAPGEF1-203ENST00000372195 TRIM5Q9C035 493 aa28.77■■■□□ 2.2
RAPGEF1-203ENST00000372195 STK3Q13188 491 aa28.77■■■□□ 2.2
RAPGEF1-203ENST00000372195 CUX1P39880 1505 aa28.77■■■□□ 2.2
RAPGEF1-203ENST00000372195 NLRP6P59044 892 aa28.76■■■□□ 2.2
RAPGEF1-203ENST00000372195 RUFY1Q96T51 708 aa28.76■■■□□ 2.2
RAPGEF1-203ENST00000372195 IGF1RP08069 1367 aa28.76■■■□□ 2.19
RAPGEF1-203ENST00000372195 FIBPO43427 364 aa28.76■■■□□ 2.19
RAPGEF1-203ENST00000372195 TSPY26PQ9H489 355 aa28.76■■■□□ 2.19
RAPGEF1-203ENST00000372195 RBM33Q96EV2 1170 aaKnown RBP28.74■■■□□ 2.19
RAPGEF1-203ENST00000372195 GAPVD1Q14C86 1478 aa28.74■■■□□ 2.19
RAPGEF1-203ENST00000372195 ANKRD50Q9ULJ7 1429 aa28.74■■■□□ 2.19
RAPGEF1-203ENST00000372195 PSMA5P28066 241 aa28.74■■■□□ 2.19
RAPGEF1-203ENST00000372195 CCDC43Q96MW1 224 aaKnown RBP28.73■■■□□ 2.19
RAPGEF1-203ENST00000372195 TWISTNBQ3B726 338 aaPredicted RBP28.73■■■□□ 2.19
RAPGEF1-203ENST00000372195 BRPF1P55201 1214 aaPredicted RBP28.72■■■□□ 2.19
RAPGEF1-203ENST00000372195 RRP12Q5JTH9 1297 aaKnown RBP28.72■■■□□ 2.19
RAPGEF1-203ENST00000372195 MIA2Q96PC5 1412 aa28.72■■■□□ 2.19
RAPGEF1-203ENST00000372195 MEX3CQ5U5Q3 659 aaKnown RBP28.72■■■□□ 2.19
RAPGEF1-203ENST00000372195 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
RAPGEF1-203ENST00000372195 CAGE1Q8TC20 777 aa28.71■■■□□ 2.19
RAPGEF1-203ENST00000372195 NAT10Q9H0A0 1025 aaKnown RBP28.71■■■□□ 2.19
RAPGEF1-203ENST00000372195 KLHL34Q8N239 644 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms