RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 PUS7Q96PZ0 661 aaKnown RBP26.41■■□□□ 1.82
LHX3-202ENST00000371748 RNF123Q5XPI4 1314 aa26.4■■□□□ 1.82
LHX3-202ENST00000371748 PDE3BQ13370 1112 aa26.4■■□□□ 1.82
LHX3-202ENST00000371748 PPP4R2Q9NY27 417 aa26.4■■□□□ 1.82
LHX3-202ENST00000371748 CDCA7LQ96GN5 454 aa26.4■■□□□ 1.82
LHX3-202ENST00000371748 POGKQ9P215 609 aa26.39■■□□□ 1.82
LHX3-202ENST00000371748 MINK1Q8N4C8 1332 aaPredicted RBP26.39■■□□□ 1.81
LHX3-202ENST00000371748 SRPK2P78362 688 aaKnown RBP26.37■■□□□ 1.81
LHX3-202ENST00000371748 USP32Q8NFA0 1604 aa26.37■■□□□ 1.81
LHX3-202ENST00000371748 MSH5O43196 834 aa26.36■■□□□ 1.81
LHX3-202ENST00000371748 MORC1Q86VD1 984 aa26.36■■□□□ 1.81
LHX3-202ENST00000371748 ANKRD36BQ8N2N9 1353 aa26.36■■□□□ 1.81
LHX3-202ENST00000371748 SETD1AO15047 1707 aaKnown RBP26.36■■□□□ 1.81
LHX3-202ENST00000371748 TNNT2P45379 298 aaPredicted RBP26.34■■□□□ 1.81
LHX3-202ENST00000371748 CGNL1Q0VF96 1302 aa26.33■■□□□ 1.81
LHX3-202ENST00000371748 TNRQ92752 1358 aa26.32■■□□□ 1.8
LHX3-202ENST00000371748 NRXN3Q9Y4C0 1643 aa26.31■■□□□ 1.8
LHX3-202ENST00000371748 CCDC146Q8IYE0 955 aa26.31■■□□□ 1.8
LHX3-202ENST00000371748 B4GALNT3Q6L9W6 998 aa26.3■■□□□ 1.8
LHX3-202ENST00000371748 FANCIQ9NVI1 1328 aa26.3■■□□□ 1.8
LHX3-202ENST00000371748 PLEKHH1Q9ULM0 1364 aa26.3■■□□□ 1.8
LHX3-202ENST00000371748 RCAN3Q9UKA8 241 aa26.29■■□□□ 1.8
LHX3-202ENST00000371748 A0A1W2PP64 1363 aa26.28■■□□□ 1.8
LHX3-202ENST00000371748 POLR3AO14802 1390 aaPredicted RBP26.28■■□□□ 1.8
LHX3-202ENST00000371748 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.27■■□□□ 1.8
LHX3-202ENST00000371748 ATAD2Q6PL18 1390 aa26.27■■□□□ 1.8
LHX3-202ENST00000371748 WAPLQ7Z5K2 1190 aa26.27■■□□□ 1.8
LHX3-202ENST00000371748 NINLQ9Y2I6 1382 aa26.26■■□□□ 1.79
LHX3-202ENST00000371748 DLC1Q96QB1 1528 aa26.26■■□□□ 1.79
LHX3-202ENST00000371748 UBR1Q8IWV7 1749 aa26.25■■□□□ 1.79
LHX3-202ENST00000371748 CDK19Q9BWU1 502 aa26.25■■□□□ 1.79
LHX3-202ENST00000371748 RRP1P56182 461 aaKnown RBP26.24■■□□□ 1.79
LHX3-202ENST00000371748 SHPRHQ149N8 1683 aa26.23■■□□□ 1.79
LHX3-202ENST00000371748 NSD2O96028 1365 aa26.22■■□□□ 1.79
LHX3-202ENST00000371748 METP08581 1390 aa26.22■■□□□ 1.79
LHX3-202ENST00000371748 CD163L1Q9NR16 1453 aa26.21■■□□□ 1.79
LHX3-202ENST00000371748 APAF1O14727 1248 aa26.21■■□□□ 1.79
LHX3-202ENST00000371748 ZNF521Q96K83 1311 aa26.21■■□□□ 1.79
LHX3-202ENST00000371748 ABCC11Q96J66 1382 aa26.21■■□□□ 1.79
LHX3-202ENST00000371748 CEBPAP49715 358 aaPredicted RBP26.21■■□□□ 1.79
LHX3-202ENST00000371748 MTHFSP49914 203 aa26.2■■□□□ 1.79
LHX3-202ENST00000371748 BCL11AQ9H165 835 aa26.2■■□□□ 1.79
LHX3-202ENST00000371748 TRHP20396 242 aaPredicted RBP26.19■■□□□ 1.78
LHX3-202ENST00000371748 TERF2IPQ9NYB0 399 aa26.19■■□□□ 1.78
LHX3-202ENST00000371748 TMEM2Q9UHN6 1383 aa26.19■■□□□ 1.78
LHX3-202ENST00000371748 HDGFP51858 240 aaKnown RBP26.19■■□□□ 1.78
LHX3-202ENST00000371748 CABP1Q9NZU7 370 aa26.17■■□□□ 1.78
LHX3-202ENST00000371748 GOLGA2Q08379 1002 aa26.16■■□□□ 1.78
LHX3-202ENST00000371748 GGNBP2Q9H3C7 697 aa26.16■■□□□ 1.78
LHX3-202ENST00000371748 PLPPR3Q6T4P5 718 aa26.15■■□□□ 1.78
LHX3-202ENST00000371748 TXNDC2Q86VQ3 553 aa26.15■■□□□ 1.78
LHX3-202ENST00000371748 DUSP27Q5VZP5 1158 aa26.14■■□□□ 1.78
LHX3-202ENST00000371748 C3P01024 1663 aa26.14■■□□□ 1.78
LHX3-202ENST00000371748 HDGFL2Q7Z4V5 671 aaPredicted RBP26.13■■□□□ 1.77
LHX3-202ENST00000371748 ANKRD26Q9UPS8 1709 aa26.13■■□□□ 1.77
LHX3-202ENST00000371748 CFAP53Q96M91 514 aa26.12■■□□□ 1.77
LHX3-202ENST00000371748 KNDC1Q76NI1 1749 aa26.12■■□□□ 1.77
LHX3-202ENST00000371748 FER1L4A9Z1Z3 1794 aa26.12■■□□□ 1.77
LHX3-202ENST00000371748 FYB1O15117 783 aa26.12■■□□□ 1.77
LHX3-202ENST00000371748 NLRP1Q9C000 1473 aa26.11■■□□□ 1.77
LHX3-202ENST00000371748 CCDC136Q96JN2 1154 aa26.11■■□□□ 1.77
LHX3-202ENST00000371748 SLFN5Q08AF3 891 aa26.1■■□□□ 1.77
LHX3-202ENST00000371748 PLIN1O60240 522 aa26.09■■□□□ 1.77
LHX3-202ENST00000371748 LTKP29376 864 aa26.09■■□□□ 1.77
LHX3-202ENST00000371748 EXOC6Q8TAG9 804 aa26.09■■□□□ 1.77
LHX3-202ENST00000371748 KIF20BQ96Q89 1820 aa26.08■■□□□ 1.77
LHX3-202ENST00000371748 SPINK5Q9NQ38 1064 aaPredicted RBP26.08■■□□□ 1.77
LHX3-202ENST00000371748 WASLO00401 505 aaPredicted RBP26.07■■□□□ 1.76
LHX3-202ENST00000371748 ADAMTS13Q76LX8 1427 aa26.07■■□□□ 1.76
LHX3-202ENST00000371748 TECPR2O15040 1411 aa26.07■■□□□ 1.76
LHX3-202ENST00000371748 CPS1P31327 1500 aa26.06■■□□□ 1.76
LHX3-202ENST00000371748 MED14O60244 1454 aa26.06■■□□□ 1.76
LHX3-202ENST00000371748 FAM135BQ49AJ0 1406 aa26.05■■□□□ 1.76
LHX3-202ENST00000371748 RUNDC1Q96C34 613 aa26.05■■□□□ 1.76
LHX3-202ENST00000371748 DMRT2Q9Y5R5 561 aa26.05■■□□□ 1.76
LHX3-202ENST00000371748 ATP7BP35670 1465 aa26.05■■□□□ 1.76
LHX3-202ENST00000371748 TRMT2AQ8IZ69 625 aaKnown RBP26.04■■□□□ 1.76
LHX3-202ENST00000371748 PLEKHG1Q9ULL1 1385 aa26.03■■□□□ 1.76
LHX3-202ENST00000371748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.03■■□□□ 1.76
LHX3-202ENST00000371748 NEUROD2Q15784 382 aa26.03■■□□□ 1.76
LHX3-202ENST00000371748 NGEFQ8N5V2 710 aa26.03■■□□□ 1.76
LHX3-202ENST00000371748 SIRT1Q96EB6 747 aa26.03■■□□□ 1.76
LHX3-202ENST00000371748 RRP7AQ9Y3A4 280 aaKnown RBP26.02■■□□□ 1.76
LHX3-202ENST00000371748 PPIP5K1Q6PFW1 1433 aa26.02■■□□□ 1.76
LHX3-202ENST00000371748 ROBO2Q9HCK4 1378 aa26.02■■□□□ 1.76
LHX3-202ENST00000371748 IQSEC2Q5JU85 1478 aa26.01■■□□□ 1.75
LHX3-202ENST00000371748 U2AF1L5P0DN76 240 aaPredicted RBP26■■□□□ 1.75
LHX3-202ENST00000371748 U2AF1Q01081 240 aaKnown RBP eCLIP26■■□□□ 1.75
LHX3-202ENST00000371748 WWC1Q8IX03 1113 aa26■■□□□ 1.75
LHX3-202ENST00000371748 TCP11L2Q8N4U5 519 aa26■■□□□ 1.75
LHX3-202ENST00000371748 NCKAP5LQ9HCH0 1330 aa25.99■■□□□ 1.75
LHX3-202ENST00000371748 E9PSI1 815 aa25.99■■□□□ 1.75
LHX3-202ENST00000371748 NUDT16Q96DE0 195 aaKnown RBP25.99■■□□□ 1.75
LHX3-202ENST00000371748 ERICH6Q7L0X2 663 aa25.98■■□□□ 1.75
LHX3-202ENST00000371748 SLC26A8Q96RN1 970 aa25.98■■□□□ 1.75
LHX3-202ENST00000371748 EID1Q9Y6B2 187 aa25.98■■□□□ 1.75
LHX3-202ENST00000371748 COL3A1P02461 1466 aaPredicted RBP25.98■■□□□ 1.75
LHX3-202ENST00000371748 NKTRP30414 1462 aaKnown RBP25.98■■□□□ 1.75
LHX3-202ENST00000371748 CPSF1Q10570 1443 aaKnown RBP25.96■■□□□ 1.75
LHX3-202ENST00000371748 SLIT1O75093 1534 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms