RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 INSRP06213 1382 aa31.72■■■□□ 2.67
LHX3-201ENST00000371746 CEBPAP49715 358 aaPredicted RBP31.67■■■□□ 2.66
LHX3-201ENST00000371746 ANKRD36BQ8N2N9 1353 aa31.67■■■□□ 2.66
LHX3-201ENST00000371746 TNNT2P45379 298 aaPredicted RBP31.66■■■□□ 2.66
LHX3-201ENST00000371746 MORC1Q86VD1 984 aa31.65■■■□□ 2.66
LHX3-201ENST00000371746 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.65■■■□□ 2.66
LHX3-201ENST00000371746 WAPLQ7Z5K2 1190 aa31.64■■■□□ 2.66
LHX3-201ENST00000371746 CGNL1Q0VF96 1302 aa31.63■■■□□ 2.65
LHX3-201ENST00000371746 CDCA7LQ96GN5 454 aa31.63■■■□□ 2.65
LHX3-201ENST00000371746 METP08581 1390 aa31.61■■■□□ 2.65
LHX3-201ENST00000371746 SETD1AO15047 1707 aaKnown RBP31.61■■■□□ 2.65
LHX3-201ENST00000371746 NRXN3Q9Y4C0 1643 aa31.6■■■□□ 2.65
LHX3-201ENST00000371746 PLEKHH1Q9ULM0 1364 aa31.6■■■□□ 2.65
LHX3-201ENST00000371746 PLPPR3Q6T4P5 718 aa31.6■■■□□ 2.65
LHX3-201ENST00000371746 A0A1W2PP64 1363 aa31.6■■■□□ 2.65
LHX3-201ENST00000371746 PDE3BQ13370 1112 aa31.59■■■□□ 2.65
LHX3-201ENST00000371746 CDK19Q9BWU1 502 aa31.58■■■□□ 2.65
LHX3-201ENST00000371746 TMEM2Q9UHN6 1383 aa31.58■■■□□ 2.65
LHX3-201ENST00000371746 ATAD2Q6PL18 1390 aa31.58■■■□□ 2.65
LHX3-201ENST00000371746 RNF123Q5XPI4 1314 aa31.57■■■□□ 2.64
LHX3-201ENST00000371746 ERICH6BQ5W0A0 696 aa31.56■■■□□ 2.64
LHX3-201ENST00000371746 USP32Q8NFA0 1604 aa31.56■■■□□ 2.64
LHX3-201ENST00000371746 ABCC11Q96J66 1382 aa31.56■■■□□ 2.64
LHX3-201ENST00000371746 NINLQ9Y2I6 1382 aa31.56■■■□□ 2.64
LHX3-201ENST00000371746 HDGFP51858 240 aaKnown RBP31.55■■■□□ 2.64
LHX3-201ENST00000371746 CCDC146Q8IYE0 955 aa31.55■■■□□ 2.64
LHX3-201ENST00000371746 DLC1Q96QB1 1528 aa31.54■■■□□ 2.64
LHX3-201ENST00000371746 UBR1Q8IWV7 1749 aa31.54■■■□□ 2.64
LHX3-201ENST00000371746 TXNDC2Q86VQ3 553 aa31.51■■■□□ 2.64
LHX3-201ENST00000371746 POLR3AO14802 1390 aaPredicted RBP31.51■■■□□ 2.64
LHX3-201ENST00000371746 PPP4R2Q9NY27 417 aa31.5■■■□□ 2.63
LHX3-201ENST00000371746 CD163L1Q9NR16 1453 aa31.5■■■□□ 2.63
LHX3-201ENST00000371746 TERF2IPQ9NYB0 399 aa31.49■■■□□ 2.63
LHX3-201ENST00000371746 CABP1Q9NZU7 370 aa31.49■■■□□ 2.63
LHX3-201ENST00000371746 LTKP29376 864 aa31.48■■■□□ 2.63
LHX3-201ENST00000371746 NSD2O96028 1365 aa31.48■■■□□ 2.63
LHX3-201ENST00000371746 NLRP1Q9C000 1473 aa31.47■■■□□ 2.63
LHX3-201ENST00000371746 RCAN3Q9UKA8 241 aa31.47■■■□□ 2.63
LHX3-201ENST00000371746 MTHFSP49914 203 aa31.47■■■□□ 2.63
LHX3-201ENST00000371746 GGNBP2Q9H3C7 697 aa31.45■■■□□ 2.63
LHX3-201ENST00000371746 C3P01024 1663 aa31.44■■■□□ 2.62
LHX3-201ENST00000371746 APAF1O14727 1248 aa31.44■■■□□ 2.62
LHX3-201ENST00000371746 ADAMTS13Q76LX8 1427 aa31.42■■■□□ 2.62
LHX3-201ENST00000371746 B4GALNT3Q6L9W6 998 aa31.41■■■□□ 2.62
LHX3-201ENST00000371746 ZNF521Q96K83 1311 aa31.41■■■□□ 2.62
LHX3-201ENST00000371746 HDGFL2Q7Z4V5 671 aaPredicted RBP31.41■■■□□ 2.62
LHX3-201ENST00000371746 TSHZ2Q9NRE2 1034 aa31.41■■■□□ 2.62
LHX3-201ENST00000371746 FER1L4A9Z1Z3 1794 aa31.4■■■□□ 2.62
LHX3-201ENST00000371746 FYB1O15117 783 aa31.4■■■□□ 2.62
LHX3-201ENST00000371746 WASLO00401 505 aaPredicted RBP31.38■■■□□ 2.61
LHX3-201ENST00000371746 RRP1P56182 461 aaKnown RBP31.38■■■□□ 2.61
LHX3-201ENST00000371746 TECPR2O15040 1411 aa31.38■■■□□ 2.61
LHX3-201ENST00000371746 PLEKHG1Q9ULL1 1385 aa31.37■■■□□ 2.61
LHX3-201ENST00000371746 FAM135BQ49AJ0 1406 aa31.36■■■□□ 2.61
LHX3-201ENST00000371746 SLC26A8Q96RN1 970 aa31.36■■■□□ 2.61
LHX3-201ENST00000371746 SHPRHQ149N8 1683 aa31.36■■■□□ 2.61
LHX3-201ENST00000371746 ROBO2Q9HCK4 1378 aa31.35■■■□□ 2.61
LHX3-201ENST00000371746 CFAP53Q96M91 514 aa31.35■■■□□ 2.61
LHX3-201ENST00000371746 GOLGA2Q08379 1002 aa31.34■■■□□ 2.61
LHX3-201ENST00000371746 EID1Q9Y6B2 187 aa31.34■■■□□ 2.61
LHX3-201ENST00000371746 DUSP27Q5VZP5 1158 aa31.32■■■□□ 2.6
LHX3-201ENST00000371746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.32■■■□□ 2.6
LHX3-201ENST00000371746 SIRT1Q96EB6 747 aa31.32■■■□□ 2.6
LHX3-201ENST00000371746 CPS1P31327 1500 aa31.32■■■□□ 2.6
LHX3-201ENST00000371746 NCKAP5LQ9HCH0 1330 aa31.32■■■□□ 2.6
LHX3-201ENST00000371746 KNDC1Q76NI1 1749 aa31.31■■■□□ 2.6
LHX3-201ENST00000371746 ATP7BP35670 1465 aa31.29■■■□□ 2.6
LHX3-201ENST00000371746 PPIP5K1Q6PFW1 1433 aa31.28■■■□□ 2.6
LHX3-201ENST00000371746 NUDT16Q96DE0 195 aaKnown RBP31.28■■■□□ 2.6
LHX3-201ENST00000371746 SPINK5Q9NQ38 1064 aaPredicted RBP31.28■■■□□ 2.6
LHX3-201ENST00000371746 MED14O60244 1454 aa31.27■■■□□ 2.6
LHX3-201ENST00000371746 ARHGAP23Q9P227 1491 aa31.26■■■□□ 2.6
LHX3-201ENST00000371746 SLIT1O75093 1534 aa31.26■■■□□ 2.6
LHX3-201ENST00000371746 SLFN5Q08AF3 891 aa31.26■■■□□ 2.59
LHX3-201ENST00000371746 THEMISQ8N1K5 641 aaPredicted RBP31.25■■■□□ 2.59
LHX3-201ENST00000371746 DMRT2Q9Y5R5 561 aa31.25■■■□□ 2.59
LHX3-201ENST00000371746 PLIN1O60240 522 aa31.24■■■□□ 2.59
LHX3-201ENST00000371746 PTPRUQ92729 1446 aa31.24■■■□□ 2.59
LHX3-201ENST00000371746 RUNDC1Q96C34 613 aa31.24■■■□□ 2.59
LHX3-201ENST00000371746 RRP7AQ9Y3A4 280 aaKnown RBP31.24■■■□□ 2.59
LHX3-201ENST00000371746 U2AF1L5P0DN76 240 aaPredicted RBP31.23■■■□□ 2.59
LHX3-201ENST00000371746 U2AF1Q01081 240 aaKnown RBP eCLIP31.23■■■□□ 2.59
LHX3-201ENST00000371746 NEUROD2Q15784 382 aa31.23■■■□□ 2.59
LHX3-201ENST00000371746 CCDC61Q9Y6R9 512 aa31.23■■■□□ 2.59
LHX3-201ENST00000371746 CPSF1Q10570 1443 aaKnown RBP31.22■■■□□ 2.59
LHX3-201ENST00000371746 PRR36Q9H6K5 1346 aa31.21■■■□□ 2.59
LHX3-201ENST00000371746 ANKRD26Q9UPS8 1709 aa31.21■■■□□ 2.59
LHX3-201ENST00000371746 TCP11L2Q8N4U5 519 aa31.2■■■□□ 2.59
LHX3-201ENST00000371746 FBLN1P23142 703 aa31.19■■■□□ 2.58
LHX3-201ENST00000371746 WWC1Q8IX03 1113 aa31.19■■■□□ 2.58
LHX3-201ENST00000371746 EXOC6Q8TAG9 804 aa31.19■■■□□ 2.58
LHX3-201ENST00000371746 CCDC136Q96JN2 1154 aa31.19■■■□□ 2.58
LHX3-201ENST00000371746 TRMT2AQ8IZ69 625 aaKnown RBP31.19■■■□□ 2.58
LHX3-201ENST00000371746 NGEFQ8N5V2 710 aa31.19■■■□□ 2.58
LHX3-201ENST00000371746 NUTM2FA1L443 756 aa31.17■■■□□ 2.58
LHX3-201ENST00000371746 AMOTL2Q9Y2J4 779 aa31.17■■■□□ 2.58
LHX3-201ENST00000371746 KIF20BQ96Q89 1820 aa31.17■■■□□ 2.58
LHX3-201ENST00000371746 IQSEC2Q5JU85 1478 aa31.16■■■□□ 2.58
LHX3-201ENST00000371746 U2SURPO15042 1029 aaKnown RBP31.16■■■□□ 2.58
LHX3-201ENST00000371746 EDC4Q6P2E9 1401 aaKnown RBP31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms