RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TRMT2AQ8IZ69 625 aaKnown RBP37.98■■■■□ 3.67
SSBP3-204ENST00000371320 TNNT2P45379 298 aaPredicted RBP37.97■■■■□ 3.67
SSBP3-204ENST00000371320 USP32Q8NFA0 1604 aa37.97■■■■□ 3.67
SSBP3-204ENST00000371320 TMEM131LA2VDJ0 1609 aa37.96■■■■□ 3.67
SSBP3-204ENST00000371320 STK26Q9P289 416 aa37.94■■■■□ 3.66
SSBP3-204ENST00000371320 ANKRD36BQ8N2N9 1353 aa37.94■■■■□ 3.66
SSBP3-204ENST00000371320 TSPOAP1O95153 1857 aa37.93■■■■□ 3.66
SSBP3-204ENST00000371320 C20orf194Q5TEA3 1177 aa37.93■■■■□ 3.66
SSBP3-204ENST00000371320 SAFB2Q14151 953 aaKnown RBP eCLIP37.92■■■■□ 3.66
SSBP3-204ENST00000371320 FBXO31Q5XUX0 539 aaPredicted RBP37.92■■■■□ 3.66
SSBP3-204ENST00000371320 CABP2Q9NPB3 220 aa37.92■■■■□ 3.66
SSBP3-204ENST00000371320 MYO5BQ9ULV0 1848 aa37.92■■■■□ 3.66
SSBP3-204ENST00000371320 GOLGA6L2Q8N9W4 650 aaPredicted RBP37.91■■■■□ 3.66
SSBP3-204ENST00000371320 E9PSI1 815 aa37.91■■■■□ 3.66
SSBP3-204ENST00000371320 SENP3Q9H4L4 574 aaPredicted RBP37.91■■■■□ 3.66
SSBP3-204ENST00000371320 SPINK5Q9NQ38 1064 aaPredicted RBP37.91■■■■□ 3.66
SSBP3-204ENST00000371320 TCERG1O14776 1098 aaKnown RBP37.9■■■■□ 3.66
SSBP3-204ENST00000371320 ERICH6Q7L0X2 663 aa37.9■■■■□ 3.66
SSBP3-204ENST00000371320 NKTRP30414 1462 aaKnown RBP37.88■■■■□ 3.65
SSBP3-204ENST00000371320 NSD2O96028 1365 aa37.86■■■■□ 3.65
SSBP3-204ENST00000371320 SHPRHQ149N8 1683 aa37.84■■■■□ 3.65
SSBP3-204ENST00000371320 MTHFSP49914 203 aa37.84■■■■□ 3.65
SSBP3-204ENST00000371320 CFAP53Q96M91 514 aa37.83■■■■□ 3.65
SSBP3-204ENST00000371320 PPP6R1Q9UPN7 881 aa37.83■■■■□ 3.65
SSBP3-204ENST00000371320 SRPK2P78362 688 aaKnown RBP37.82■■■■□ 3.64
SSBP3-204ENST00000371320 NINLQ9Y2I6 1382 aa37.82■■■■□ 3.64
SSBP3-204ENST00000371320 STAG3Q9UJ98 1225 aa37.81■■■■□ 3.64
SSBP3-204ENST00000371320 REREQ9P2R6 1566 aa37.81■■■■□ 3.64
SSBP3-204ENST00000371320 RUNDC1Q96C34 613 aa37.8■■■■□ 3.64
SSBP3-204ENST00000371320 PTPRMP28827 1452 aa37.8■■■■□ 3.64
SSBP3-204ENST00000371320 WWC1Q8IX03 1113 aa37.8■■■■□ 3.64
SSBP3-204ENST00000371320 DMRT2Q9Y5R5 561 aa37.8■■■■□ 3.64
SSBP3-204ENST00000371320 AGLP35573 1532 aa37.79■■■■□ 3.64
SSBP3-204ENST00000371320 YTHDC2Q9H6S0 1430 aaKnown RBP37.79■■■■□ 3.64
SSBP3-204ENST00000371320 PRAM1Q96QH2 718 aa37.78■■■■□ 3.64
SSBP3-204ENST00000371320 POGKQ9P215 609 aa37.78■■■■□ 3.64
SSBP3-204ENST00000371320 KIF13AQ9H1H9 1805 aa37.78■■■■□ 3.64
SSBP3-204ENST00000371320 MS4A1P11836 297 aa37.76■■■■□ 3.64
SSBP3-204ENST00000371320 MINK1Q8N4C8 1332 aaPredicted RBP37.75■■■■□ 3.63
SSBP3-204ENST00000371320 ANP32AP39687 249 aaKnown RBP37.75■■■■□ 3.63
SSBP3-204ENST00000371320 A0A1W2PP64 1363 aa37.74■■■■□ 3.63
SSBP3-204ENST00000371320 ATAD2Q6PL18 1390 aa37.74■■■■□ 3.63
SSBP3-204ENST00000371320 ALKQ9UM73 1620 aa37.72■■■■□ 3.63
SSBP3-204ENST00000371320 ABCC11Q96J66 1382 aa37.72■■■■□ 3.63
SSBP3-204ENST00000371320 TCP11L2Q8N4U5 519 aa37.71■■■■□ 3.63
SSBP3-204ENST00000371320 BCAR3O75815 825 aa37.69■■■■□ 3.62
SSBP3-204ENST00000371320 NEUROD2Q15784 382 aa37.69■■■■□ 3.62
SSBP3-204ENST00000371320 IQSEC2Q5JU85 1478 aa37.68■■■■□ 3.62
SSBP3-204ENST00000371320 TERF2IPQ9NYB0 399 aa37.68■■■■□ 3.62
SSBP3-204ENST00000371320 RRP7AQ9Y3A4 280 aaKnown RBP37.68■■■■□ 3.62
SSBP3-204ENST00000371320 CLTCQ00610 1675 aaKnown RBP37.68■■■■□ 3.62
SSBP3-204ENST00000371320 PDE4AP27815 886 aa37.67■■■■□ 3.62
SSBP3-204ENST00000371320 KDM2BQ8NHM5 1336 aa37.67■■■■□ 3.62
SSBP3-204ENST00000371320 CENPQQ7L2Z9 268 aaPredicted RBP37.65■■■■□ 3.62
SSBP3-204ENST00000371320 NOP58Q9Y2X3 529 aaKnown RBP37.64■■■■□ 3.62
SSBP3-204ENST00000371320 PHF23Q9BUL5 403 aaPredicted RBP37.64■■■■□ 3.62
SSBP3-204ENST00000371320 MLECQ14165 292 aa37.63■■■■□ 3.61
SSBP3-204ENST00000371320 IPO9Q96P70 1041 aaKnown RBP37.62■■■■□ 3.61
SSBP3-204ENST00000371320 BACH2Q9BYV9 841 aa37.62■■■■□ 3.61
SSBP3-204ENST00000371320 A2ML1A8K2U0 1454 aa37.62■■■■□ 3.61
SSBP3-204ENST00000371320 SPATA31D1Q6ZQQ2 1576 aa37.62■■■■□ 3.61
SSBP3-204ENST00000371320 GGNBP2Q9H3C7 697 aa37.62■■■■□ 3.61
SSBP3-204ENST00000371320 U2AF1L5P0DN76 240 aaPredicted RBP37.61■■■■□ 3.61
SSBP3-204ENST00000371320 U2AF1Q01081 240 aaKnown RBP eCLIP37.61■■■■□ 3.61
SSBP3-204ENST00000371320 WDR63Q8IWG1 891 aa37.61■■■■□ 3.61
SSBP3-204ENST00000371320 CDK19Q9BWU1 502 aa37.6■■■■□ 3.61
SSBP3-204ENST00000371320 CCDC27Q2M243 656 aa37.59■■■■□ 3.61
SSBP3-204ENST00000371320 CD163L1Q9NR16 1453 aa37.57■■■■□ 3.61
SSBP3-204ENST00000371320 RIMS2Q9UQ26 1411 aa37.57■■■■□ 3.61
SSBP3-204ENST00000371320 HDGFL2Q7Z4V5 671 aaPredicted RBP37.57■■■■□ 3.6
SSBP3-204ENST00000371320 FYB1O15117 783 aa37.56■■■■□ 3.6
SSBP3-204ENST00000371320 SKAP1Q86WV1 359 aa37.56■■■■□ 3.6
SSBP3-204ENST00000371320 ARHGEF40Q8TER5 1519 aa37.56■■■■□ 3.6
SSBP3-204ENST00000371320 NCBP3Q53F19 620 aaKnown RBP37.56■■■■□ 3.6
SSBP3-204ENST00000371320 MED14O60244 1454 aa37.53■■■■□ 3.6
SSBP3-204ENST00000371320 PDE3AQ14432 1141 aa37.52■■■■□ 3.6
SSBP3-204ENST00000371320 CABP1Q9NZU7 370 aa37.51■■■■□ 3.59
SSBP3-204ENST00000371320 DLC1Q96QB1 1528 aa37.5■■■■□ 3.59
SSBP3-204ENST00000371320 CANXP27824 592 aaKnown RBP37.5■■■■□ 3.59
SSBP3-204ENST00000371320 PAK3O75914 559 aaPredicted RBP37.49■■■■□ 3.59
SSBP3-204ENST00000371320 NLRP1Q9C000 1473 aa37.49■■■■□ 3.59
SSBP3-204ENST00000371320 WAPLQ7Z5K2 1190 aa37.47■■■■□ 3.59
SSBP3-204ENST00000371320 NPM2Q86SE8 214 aaKnown RBP37.47■■■■□ 3.59
SSBP3-204ENST00000371320 U2SURPO15042 1029 aaKnown RBP37.46■■■■□ 3.59
SSBP3-204ENST00000371320 ESF1Q9H501 851 aaKnown RBP37.46■■■■□ 3.59
SSBP3-204ENST00000371320 ANKRD26Q9UPS8 1709 aa37.46■■■■□ 3.59
SSBP3-204ENST00000371320 RARSP54136 660 aaKnown RBP37.46■■■■□ 3.59
SSBP3-204ENST00000371320 ZBTB47Q9UFB7 747 aaPredicted RBP37.46■■■■□ 3.59
SSBP3-204ENST00000371320 MYH16Q9H6N6 1097 aa37.45■■■■□ 3.58
SSBP3-204ENST00000371320 ADGRB2O60241 1585 aa37.44■■■■□ 3.58
SSBP3-204ENST00000371320 COL3A1P02461 1466 aaPredicted RBP37.44■■■■□ 3.58
SSBP3-204ENST00000371320 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.43■■■■□ 3.58
SSBP3-204ENST00000371320 FRAT1Q92837 279 aaPredicted RBP37.41■■■■□ 3.58
SSBP3-204ENST00000371320 ZMYM3Q14202 1370 aa37.41■■■■□ 3.58
SSBP3-204ENST00000371320 SETD1AO15047 1707 aaKnown RBP37.41■■■■□ 3.58
SSBP3-204ENST00000371320 PLEKHF1Q96S99 279 aa37.4■■■■□ 3.58
SSBP3-204ENST00000371320 PANK1Q8TE04 598 aa37.4■■■■□ 3.58
SSBP3-204ENST00000371320 COG6Q9Y2V7 657 aa37.37■■■■□ 3.57
SSBP3-204ENST00000371320 MAPK8IP3Q9UPT6 1336 aa37.36■■■■□ 3.57
SSBP3-204ENST00000371320 ATP7BP35670 1465 aa37.35■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms