RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
GPC3-201ENST00000370818 YTHDC2Q9H6S0 1430 aaKnown RBP17.02■□□□□ 0.32
GPC3-201ENST00000370818 ALKQ9UM73 1620 aa17.02■□□□□ 0.32
GPC3-201ENST00000370818 SAFB2Q14151 953 aaKnown RBP eCLIP17.02■□□□□ 0.31
GPC3-201ENST00000370818 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
GPC3-201ENST00000370818 WDR43Q15061 677 aaKnown RBP eCLIP17■□□□□ 0.31
GPC3-201ENST00000370818 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
GPC3-201ENST00000370818 CABP2Q9NPB3 220 aa16.99■□□□□ 0.31
GPC3-201ENST00000370818 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
GPC3-201ENST00000370818 CDCA7LQ96GN5 454 aa16.99■□□□□ 0.31
GPC3-201ENST00000370818 NBR1Q14596 966 aa16.98■□□□□ 0.31
GPC3-201ENST00000370818 PRAM1Q96QH2 718 aa16.98■□□□□ 0.31
GPC3-201ENST00000370818 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
GPC3-201ENST00000370818 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
GPC3-201ENST00000370818 ANKRD36BQ8N2N9 1353 aa16.97■□□□□ 0.31
GPC3-201ENST00000370818 USP32Q8NFA0 1604 aa16.96■□□□□ 0.31
GPC3-201ENST00000370818 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
GPC3-201ENST00000370818 MINK1Q8N4C8 1332 aaPredicted RBP16.94■□□□□ 0.3
GPC3-201ENST00000370818 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
GPC3-201ENST00000370818 POGKQ9P215 609 aa16.94■□□□□ 0.3
GPC3-201ENST00000370818 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
GPC3-201ENST00000370818 PLEKHH1Q9ULM0 1364 aa16.94■□□□□ 0.3
GPC3-201ENST00000370818 SRPK2P78362 688 aaKnown RBP16.93■□□□□ 0.3
GPC3-201ENST00000370818 POLR3AO14802 1390 aaPredicted RBP16.93■□□□□ 0.3
GPC3-201ENST00000370818 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
GPC3-201ENST00000370818 RCAN3Q9UKA8 241 aa16.92■□□□□ 0.3
GPC3-201ENST00000370818 TNRQ92752 1358 aa16.92■□□□□ 0.3
GPC3-201ENST00000370818 NINLQ9Y2I6 1382 aa16.92■□□□□ 0.3
GPC3-201ENST00000370818 B4GALNT3Q6L9W6 998 aa16.92■□□□□ 0.3
GPC3-201ENST00000370818 ZNF521Q96K83 1311 aa16.92■□□□□ 0.3
GPC3-201ENST00000370818 A0A1W2PP64 1363 aa16.91■□□□□ 0.3
GPC3-201ENST00000370818 CCDC136Q96JN2 1154 aa16.91■□□□□ 0.3
GPC3-201ENST00000370818 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
GPC3-201ENST00000370818 ATAD2Q6PL18 1390 aa16.91■□□□□ 0.3
GPC3-201ENST00000370818 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
GPC3-201ENST00000370818 DLC1Q96QB1 1528 aa16.9■□□□□ 0.3
GPC3-201ENST00000370818 CCDC146Q8IYE0 955 aa16.9■□□□□ 0.3
GPC3-201ENST00000370818 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.9■□□□□ 0.3
GPC3-201ENST00000370818 RRP1P56182 461 aaKnown RBP16.89■□□□□ 0.3
GPC3-201ENST00000370818 NSD2O96028 1365 aa16.89■□□□□ 0.29
GPC3-201ENST00000370818 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
GPC3-201ENST00000370818 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
GPC3-201ENST00000370818 WAPLQ7Z5K2 1190 aa16.88■□□□□ 0.29
GPC3-201ENST00000370818 IL27Q8NEV9 243 aa16.88■□□□□ 0.29
GPC3-201ENST00000370818 CDK19Q9BWU1 502 aa16.88■□□□□ 0.29
GPC3-201ENST00000370818 METP08581 1390 aa16.88■□□□□ 0.29
GPC3-201ENST00000370818 UBE2Q2Q8WVN8 375 aa16.87■□□□□ 0.29
GPC3-201ENST00000370818 APAF1O14727 1248 aa16.86■□□□□ 0.29
GPC3-201ENST00000370818 TMEM2Q9UHN6 1383 aa16.85■□□□□ 0.29
GPC3-201ENST00000370818 MTHFSP49914 203 aa16.85■□□□□ 0.29
GPC3-201ENST00000370818 SHPRHQ149N8 1683 aa16.85■□□□□ 0.29
GPC3-201ENST00000370818 DUSP27Q5VZP5 1158 aa16.84■□□□□ 0.29
GPC3-201ENST00000370818 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
GPC3-201ENST00000370818 UBR1Q8IWV7 1749 aa16.84■□□□□ 0.29
GPC3-201ENST00000370818 HDGFP51858 240 aaKnown RBP16.84■□□□□ 0.29
GPC3-201ENST00000370818 GOLGA2Q08379 1002 aa16.84■□□□□ 0.29
GPC3-201ENST00000370818 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.28
GPC3-201ENST00000370818 CABP1Q9NZU7 370 aa16.83■□□□□ 0.28
GPC3-201ENST00000370818 NLRP1Q9C000 1473 aa16.83■□□□□ 0.28
GPC3-201ENST00000370818 FYB1O15117 783 aa16.82■□□□□ 0.28
GPC3-201ENST00000370818 GGNBP2Q9H3C7 697 aa16.82■□□□□ 0.28
GPC3-201ENST00000370818 SLFN5Q08AF3 891 aa16.81■□□□□ 0.28
GPC3-201ENST00000370818 TECPR2O15040 1411 aa16.81■□□□□ 0.28
GPC3-201ENST00000370818 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
GPC3-201ENST00000370818 TRMT2AQ8IZ69 625 aaKnown RBP16.81■□□□□ 0.28
GPC3-201ENST00000370818 RTL5Q5HYW3 569 aaPredicted RBP16.8■□□□□ 0.28
GPC3-201ENST00000370818 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
GPC3-201ENST00000370818 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
GPC3-201ENST00000370818 MED14O60244 1454 aa16.8■□□□□ 0.28
GPC3-201ENST00000370818 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
GPC3-201ENST00000370818 NGEFQ8N5V2 710 aa16.79■□□□□ 0.28
GPC3-201ENST00000370818 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
GPC3-201ENST00000370818 ADAMTS13Q76LX8 1427 aa16.79■□□□□ 0.28
GPC3-201ENST00000370818 LTKP29376 864 aa16.79■□□□□ 0.28
GPC3-201ENST00000370818 EXOC6Q8TAG9 804 aa16.79■□□□□ 0.28
GPC3-201ENST00000370818 CFAP53Q96M91 514 aa16.79■□□□□ 0.28
GPC3-201ENST00000370818 SIRT1Q96EB6 747 aa16.78■□□□□ 0.28
GPC3-201ENST00000370818 WASLO00401 505 aaPredicted RBP16.78■□□□□ 0.28
GPC3-201ENST00000370818 PLIN1O60240 522 aa16.78■□□□□ 0.28
GPC3-201ENST00000370818 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
GPC3-201ENST00000370818 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
GPC3-201ENST00000370818 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
GPC3-201ENST00000370818 IPO9Q96P70 1041 aaKnown RBP16.77■□□□□ 0.28
GPC3-201ENST00000370818 KNDC1Q76NI1 1749 aa16.77■□□□□ 0.27
GPC3-201ENST00000370818 CPS1P31327 1500 aa16.76■□□□□ 0.27
GPC3-201ENST00000370818 ATP7BP35670 1465 aa16.76■□□□□ 0.27
GPC3-201ENST00000370818 RUNDC1Q96C34 613 aa16.76■□□□□ 0.27
GPC3-201ENST00000370818 IQSEC2Q5JU85 1478 aa16.76■□□□□ 0.27
GPC3-201ENST00000370818 PLEKHG1Q9ULL1 1385 aa16.75■□□□□ 0.27
GPC3-201ENST00000370818 WWC1Q8IX03 1113 aa16.75■□□□□ 0.27
GPC3-201ENST00000370818 C3P01024 1663 aa16.75■□□□□ 0.27
GPC3-201ENST00000370818 ANKRD26Q9UPS8 1709 aa16.74■□□□□ 0.27
GPC3-201ENST00000370818 E9PSI1 815 aa16.74■□□□□ 0.27
GPC3-201ENST00000370818 ROBO2Q9HCK4 1378 aa16.74■□□□□ 0.27
GPC3-201ENST00000370818 TCP11L2Q8N4U5 519 aa16.74■□□□□ 0.27
GPC3-201ENST00000370818 CPSF1Q10570 1443 aaKnown RBP16.73■□□□□ 0.27
GPC3-201ENST00000370818 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
GPC3-201ENST00000370818 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
GPC3-201ENST00000370818 NKTRP30414 1462 aaKnown RBP16.72■□□□□ 0.27
GPC3-201ENST00000370818 ZBTB47Q9UFB7 747 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms