RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 CD109Q6YHK3 1445 aa13.04□□□□□ -0.32
COL21A1-202ENST00000370817 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
COL21A1-202ENST00000370817 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
COL21A1-202ENST00000370817 PREX2Q70Z35 1606 aa13.03□□□□□ -0.32
COL21A1-202ENST00000370817 CFAP74Q9C0B2 1584 aa13.03□□□□□ -0.32
COL21A1-202ENST00000370817 PLEKHD1A6NEE1 506 aa13.02□□□□□ -0.33
COL21A1-202ENST00000370817 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.33
COL21A1-202ENST00000370817 EHBP1L1Q8N3D4 1523 aa13.02□□□□□ -0.33
COL21A1-202ENST00000370817 COL17A1Q9UMD9 1497 aaPredicted RBP13□□□□□ -0.33
COL21A1-202ENST00000370817 OSBPP22059 807 aa13□□□□□ -0.33
COL21A1-202ENST00000370817 FAM98CQ17RN3 349 aaKnown RBP13□□□□□ -0.33
COL21A1-202ENST00000370817 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
COL21A1-202ENST00000370817 NEO1Q92859 1461 aa12.99□□□□□ -0.33
COL21A1-202ENST00000370817 FRMPD1Q5SYB0 1578 aa12.98□□□□□ -0.33
COL21A1-202ENST00000370817 IFFO2Q5TF58 517 aa12.98□□□□□ -0.33
COL21A1-202ENST00000370817 PACS2Q86VP3 889 aa12.98□□□□□ -0.33
COL21A1-202ENST00000370817 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
COL21A1-202ENST00000370817 ATP1B4Q9UN42 357 aaPredicted RBP12.98□□□□□ -0.33
COL21A1-202ENST00000370817 CDK11AQ9UQ88 783 aaPredicted RBP12.98□□□□□ -0.33
COL21A1-202ENST00000370817 SUPT6HQ7KZ85 1726 aaKnown RBP12.98□□□□□ -0.33
COL21A1-202ENST00000370817 PRSS12P56730 875 aa12.97□□□□□ -0.33
COL21A1-202ENST00000370817 CDHR5Q9HBB8 845 aa12.97□□□□□ -0.33
COL21A1-202ENST00000370817 FAM198AQ9UFP1 575 aa12.97□□□□□ -0.33
COL21A1-202ENST00000370817 PLCH2O75038 1416 aa12.96□□□□□ -0.33
COL21A1-202ENST00000370817 ITSN2Q9NZM3 1697 aa12.96□□□□□ -0.33
COL21A1-202ENST00000370817 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
COL21A1-202ENST00000370817 WBP1LQ9NX94 342 aa12.95□□□□□ -0.34
COL21A1-202ENST00000370817 FANCAO15360 1455 aa12.95□□□□□ -0.34
COL21A1-202ENST00000370817 LRRC9Q6ZRR7 1453 aa12.95□□□□□ -0.34
COL21A1-202ENST00000370817 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
COL21A1-202ENST00000370817 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
COL21A1-202ENST00000370817 C3orf80F5H4A9 247 aa12.92□□□□□ -0.34
COL21A1-202ENST00000370817 SMAPO00193 183 aa12.92□□□□□ -0.34
COL21A1-202ENST00000370817 SAMD9LQ8IVG5 1584 aa12.92□□□□□ -0.34
COL21A1-202ENST00000370817 LRCH3Q96II8 777 aa12.92□□□□□ -0.34
COL21A1-202ENST00000370817 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.92□□□□□ -0.34
COL21A1-202ENST00000370817 ABCC1P33527 1531 aa12.92□□□□□ -0.34
COL21A1-202ENST00000370817 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
COL21A1-202ENST00000370817 MTUS2Q5JR59 1369 aa12.92□□□□□ -0.34
COL21A1-202ENST00000370817 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
COL21A1-202ENST00000370817 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
COL21A1-202ENST00000370817 ZMYM4Q5VZL5 1548 aa12.91□□□□□ -0.34
COL21A1-202ENST00000370817 NYAP1Q6ZVC0 841 aa12.9□□□□□ -0.34
COL21A1-202ENST00000370817 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
COL21A1-202ENST00000370817 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
COL21A1-202ENST00000370817 A0A0G2JS52 829 aa12.89□□□□□ -0.35
COL21A1-202ENST00000370817 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
COL21A1-202ENST00000370817 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
COL21A1-202ENST00000370817 KDM5CP41229 1560 aa12.89□□□□□ -0.35
COL21A1-202ENST00000370817 TSR3Q9UJK0 312 aaKnown RBP12.88□□□□□ -0.35
COL21A1-202ENST00000370817 ADGRL1O94910 1474 aa12.87□□□□□ -0.35
COL21A1-202ENST00000370817 TATDN2Q93075 761 aa12.87□□□□□ -0.35
COL21A1-202ENST00000370817 PNMA3Q9UL41 463 aa12.87□□□□□ -0.35
COL21A1-202ENST00000370817 NBPF26B4DH59 902 aa12.86□□□□□ -0.35
COL21A1-202ENST00000370817 MLLT3P42568 568 aaPredicted RBP12.86□□□□□ -0.35
COL21A1-202ENST00000370817 KANK4Q5T7N3 995 aaPredicted RBP12.86□□□□□ -0.35
COL21A1-202ENST00000370817 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
COL21A1-202ENST00000370817 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
COL21A1-202ENST00000370817 ARHGEF12Q9NZN5 1544 aa12.86□□□□□ -0.35
COL21A1-202ENST00000370817 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
COL21A1-202ENST00000370817 DENND4BO75064 1496 aaPredicted RBP12.85□□□□□ -0.35
COL21A1-202ENST00000370817 ARHGEF40Q8TER5 1519 aa12.85□□□□□ -0.35
COL21A1-202ENST00000370817 SAMD7Q7Z3H4 446 aa12.85□□□□□ -0.35
COL21A1-202ENST00000370817 PLCB2Q00722 1185 aa12.84□□□□□ -0.35
COL21A1-202ENST00000370817 SIGLEC1Q9BZZ2 1709 aa12.84□□□□□ -0.35
COL21A1-202ENST00000370817 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.35
COL21A1-202ENST00000370817 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
COL21A1-202ENST00000370817 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.36
COL21A1-202ENST00000370817 HECW2Q9P2P5 1572 aa12.82□□□□□ -0.36
COL21A1-202ENST00000370817 KIDINS220Q9ULH0 1771 aa12.82□□□□□ -0.36
COL21A1-202ENST00000370817 SCAPERQ9BY12 1400 aa12.82□□□□□ -0.36
COL21A1-202ENST00000370817 EFCAB2Q5VUJ9 269 aa12.82□□□□□ -0.36
COL21A1-202ENST00000370817 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
COL21A1-202ENST00000370817 ZNF518AQ6AHZ1 1483 aa12.82□□□□□ -0.36
COL21A1-202ENST00000370817 TTC13Q8NBP0 860 aa12.81□□□□□ -0.36
COL21A1-202ENST00000370817 INO80Q9ULG1 1556 aaPredicted RBP12.81□□□□□ -0.36
COL21A1-202ENST00000370817 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
COL21A1-202ENST00000370817 MAGI2Q86UL8 1455 aa12.8□□□□□ -0.36
COL21A1-202ENST00000370817 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
COL21A1-202ENST00000370817 RGS20O76081 388 aa12.8□□□□□ -0.36
COL21A1-202ENST00000370817 PPP4CP60510 307 aa12.8□□□□□ -0.36
COL21A1-202ENST00000370817 ARHGEF5Q12774 1597 aa12.8□□□□□ -0.36
COL21A1-202ENST00000370817 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
COL21A1-202ENST00000370817 MYOM3Q5VTT5 1437 aa12.79□□□□□ -0.36
COL21A1-202ENST00000370817 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
COL21A1-202ENST00000370817 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
COL21A1-202ENST00000370817 MBD5Q9P267 1494 aa12.79□□□□□ -0.36
COL21A1-202ENST00000370817 RAPGEF3O95398 923 aa12.79□□□□□ -0.36
COL21A1-202ENST00000370817 CROCC2H7BZ55 1655 aa12.79□□□□□ -0.36
COL21A1-202ENST00000370817 ZFYVE16Q7Z3T8 1539 aa12.78□□□□□ -0.36
COL21A1-202ENST00000370817 DIP2CQ9Y2E4 1556 aa12.78□□□□□ -0.36
COL21A1-202ENST00000370817 KCNC4Q03721 635 aa12.78□□□□□ -0.36
COL21A1-202ENST00000370817 MIA2Q96PC5 1412 aa12.78□□□□□ -0.36
COL21A1-202ENST00000370817 MLH3Q9UHC1 1453 aa12.78□□□□□ -0.36
COL21A1-202ENST00000370817 REREQ9P2R6 1566 aa12.77□□□□□ -0.36
COL21A1-202ENST00000370817 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.36
COL21A1-202ENST00000370817 YEATS2Q9ULM3 1422 aa12.76□□□□□ -0.37
COL21A1-202ENST00000370817 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
COL21A1-202ENST00000370817 ADGBQ8N7X0 1667 aa12.76□□□□□ -0.37
COL21A1-202ENST00000370817 CFDP1Q9UEE9 299 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms