RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.34
PRPF38B-201ENST00000370021 RUNDC1Q96C34 613 aa12.96□□□□□ -0.34
PRPF38B-201ENST00000370021 ZHX1Q9UKY1 873 aaPredicted RBP12.96□□□□□ -0.34
PRPF38B-201ENST00000370021 ABCA8O94911 1581 aa12.95□□□□□ -0.34
PRPF38B-201ENST00000370021 NOB1Q9ULX3 412 aaKnown RBP12.95□□□□□ -0.34
PRPF38B-201ENST00000370021 ANTXR1Q9H6X2 564 aa12.95□□□□□ -0.34
PRPF38B-201ENST00000370021 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
PRPF38B-201ENST00000370021 TMEM132EQ6IEE7 984 aa12.95□□□□□ -0.34
PRPF38B-201ENST00000370021 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
PRPF38B-201ENST00000370021 MVPQ14764 893 aaKnown RBP12.94□□□□□ -0.34
PRPF38B-201ENST00000370021 ABCC10Q5T3U5 1492 aa12.94□□□□□ -0.34
PRPF38B-201ENST00000370021 PLB1Q6P1J6 1458 aa12.93□□□□□ -0.34
PRPF38B-201ENST00000370021 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
PRPF38B-201ENST00000370021 C9orf84Q5VXU9 1444 aa12.92□□□□□ -0.34
PRPF38B-201ENST00000370021 UQCRHLA0A096LP55 91 aa12.92□□□□□ -0.34
PRPF38B-201ENST00000370021 UQCRHP07919 91 aa12.92□□□□□ -0.34
PRPF38B-201ENST00000370021 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
PRPF38B-201ENST00000370021 TMEM57Q8N5G2 664 aa12.92□□□□□ -0.34
PRPF38B-201ENST00000370021 RBM27Q9P2N5 1060 aaKnown RBP12.92□□□□□ -0.34
PRPF38B-201ENST00000370021 SHANK2Q9UPX8 1470 aa12.92□□□□□ -0.34
PRPF38B-201ENST00000370021 NUP160Q12769 1436 aa12.91□□□□□ -0.34
PRPF38B-201ENST00000370021 UHRF1BP1Q6BDS2 1440 aa12.91□□□□□ -0.34
PRPF38B-201ENST00000370021 EIF3AQ14152 1382 aaKnown RBP12.91□□□□□ -0.34
PRPF38B-201ENST00000370021 TPM2P07951 284 aa12.91□□□□□ -0.34
PRPF38B-201ENST00000370021 CHAMP1Q96JM3 812 aa12.91□□□□□ -0.34
PRPF38B-201ENST00000370021 DDX19BQ9UMR2 479 aa12.91□□□□□ -0.34
PRPF38B-201ENST00000370021 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.91□□□□□ -0.34
PRPF38B-201ENST00000370021 ZSCAN30Q86W11 494 aa12.91□□□□□ -0.34
PRPF38B-201ENST00000370021 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
PRPF38B-201ENST00000370021 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
PRPF38B-201ENST00000370021 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
PRPF38B-201ENST00000370021 FAM177BA6PVY3 158 aa12.9□□□□□ -0.34
PRPF38B-201ENST00000370021 KIF3BO15066 747 aa12.9□□□□□ -0.34
PRPF38B-201ENST00000370021 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
PRPF38B-201ENST00000370021 RIPK4P57078 832 aa12.9□□□□□ -0.34
PRPF38B-201ENST00000370021 GGNBP2Q9H3C7 697 aa12.9□□□□□ -0.34
PRPF38B-201ENST00000370021 PDCL3Q9H2J4 239 aa12.89□□□□□ -0.35
PRPF38B-201ENST00000370021 CDC42BPBQ9Y5S2 1711 aa12.89□□□□□ -0.35
PRPF38B-201ENST00000370021 TRIM27P14373 513 aa12.89□□□□□ -0.35
PRPF38B-201ENST00000370021 CCDC173Q0VFZ6 552 aa12.89□□□□□ -0.35
PRPF38B-201ENST00000370021 SOX12O15370 315 aa12.88□□□□□ -0.35
PRPF38B-201ENST00000370021 ARHGEF12Q9NZN5 1544 aa12.88□□□□□ -0.35
PRPF38B-201ENST00000370021 ARHGEF5Q12774 1597 aa12.88□□□□□ -0.35
PRPF38B-201ENST00000370021 FSD2A1L4K1 749 aa12.88□□□□□ -0.35
PRPF38B-201ENST00000370021 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
PRPF38B-201ENST00000370021 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
PRPF38B-201ENST00000370021 PTPRGP23470 1445 aa12.87□□□□□ -0.35
PRPF38B-201ENST00000370021 SYCE3A1L190 88 aa12.87□□□□□ -0.35
PRPF38B-201ENST00000370021 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
PRPF38B-201ENST00000370021 TSC1Q92574 1164 aa12.87□□□□□ -0.35
PRPF38B-201ENST00000370021 GAS2L2Q8NHY3 880 aa12.86□□□□□ -0.35
PRPF38B-201ENST00000370021 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
PRPF38B-201ENST00000370021 HMOX1P09601 288 aa12.86□□□□□ -0.35
PRPF38B-201ENST00000370021 ATF7IPQ6VMQ6 1270 aa12.86□□□□□ -0.35
PRPF38B-201ENST00000370021 ZNF830Q96NB3 372 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-201ENST00000370021 IGSF3O75054 1194 aa12.86□□□□□ -0.35
PRPF38B-201ENST00000370021 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
PRPF38B-201ENST00000370021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRPF38B-201ENST00000370021 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
PRPF38B-201ENST00000370021 CD2BP2O95400 341 aaKnown RBP12.85□□□□□ -0.35
PRPF38B-201ENST00000370021 MAPK8IP2Q13387 824 aaPredicted RBP12.85□□□□□ -0.35
PRPF38B-201ENST00000370021 GGT6Q6P531 493 aa12.85□□□□□ -0.35
PRPF38B-201ENST00000370021 KIAA2012Q0VF49 1180 aa12.85□□□□□ -0.35
PRPF38B-201ENST00000370021 CASC1Q6TDU7 716 aa12.85□□□□□ -0.35
PRPF38B-201ENST00000370021 PREX2Q70Z35 1606 aa12.85□□□□□ -0.35
PRPF38B-201ENST00000370021 TRPM1Q7Z4N2 1603 aa12.85□□□□□ -0.35
PRPF38B-201ENST00000370021 FBLN1P23142 703 aa12.84□□□□□ -0.35
PRPF38B-201ENST00000370021 CBX1P83916 185 aa12.84□□□□□ -0.35
PRPF38B-201ENST00000370021 CABP2Q9NPB3 220 aa12.84□□□□□ -0.35
PRPF38B-201ENST00000370021 BLMP54132 1417 aaPredicted RBP12.84□□□□□ -0.35
PRPF38B-201ENST00000370021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.84□□□□□ -0.35
PRPF38B-201ENST00000370021 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
PRPF38B-201ENST00000370021 AFAP1Q8N556 730 aa12.84□□□□□ -0.35
PRPF38B-201ENST00000370021 SLC4A10Q6U841 1118 aa12.84□□□□□ -0.35
PRPF38B-201ENST00000370021 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
PRPF38B-201ENST00000370021 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.35
PRPF38B-201ENST00000370021 SAMD9LQ8IVG5 1584 aa12.83□□□□□ -0.36
PRPF38B-201ENST00000370021 PRAG1Q86YV5 1406 aa12.83□□□□□ -0.36
PRPF38B-201ENST00000370021 ZNF521Q96K83 1311 aa12.83□□□□□ -0.36
PRPF38B-201ENST00000370021 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
PRPF38B-201ENST00000370021 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.36
PRPF38B-201ENST00000370021 DTNBO60941 627 aa12.83□□□□□ -0.36
PRPF38B-201ENST00000370021 ATP10BO94823 1461 aa12.82□□□□□ -0.36
PRPF38B-201ENST00000370021 TBC1D9Q6ZT07 1266 aa12.82□□□□□ -0.36
PRPF38B-201ENST00000370021 UNC13BO14795 1591 aa12.81□□□□□ -0.36
PRPF38B-201ENST00000370021 TRIM6-TRIM34B2RNG4 842 aa12.81□□□□□ -0.36
PRPF38B-201ENST00000370021 PLEKHH2Q8IVE3 1493 aa12.81□□□□□ -0.36
PRPF38B-201ENST00000370021 ST18O60284 1047 aa12.81□□□□□ -0.36
PRPF38B-201ENST00000370021 PKP1Q13835 747 aa12.81□□□□□ -0.36
PRPF38B-201ENST00000370021 LAMC1P11047 1609 aa12.81□□□□□ -0.36
PRPF38B-201ENST00000370021 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
PRPF38B-201ENST00000370021 PTMSP20962 102 aa12.8□□□□□ -0.36
PRPF38B-201ENST00000370021 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
PRPF38B-201ENST00000370021 MAST1Q9Y2H9 1570 aa12.8□□□□□ -0.36
PRPF38B-201ENST00000370021 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
PRPF38B-201ENST00000370021 NEK4P51957 841 aa12.8□□□□□ -0.36
PRPF38B-201ENST00000370021 RILPL2Q969X0 211 aa12.8□□□□□ -0.36
PRPF38B-201ENST00000370021 RBSNQ9H1K0 784 aa12.8□□□□□ -0.36
PRPF38B-201ENST00000370021 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
PRPF38B-201ENST00000370021 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms