RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 CENPJQ9HC77 1338 aaPredicted RBP12.31□□□□□ -0.44
SFR1-202ENST00000369729 TMF1P82094 1093 aa12.31□□□□□ -0.44
SFR1-202ENST00000369729 SLC26A8Q96RN1 970 aa12.31□□□□□ -0.44
SFR1-202ENST00000369729 STK26Q9P289 416 aa12.31□□□□□ -0.44
SFR1-202ENST00000369729 ADGRB1O14514 1584 aa12.3□□□□□ -0.44
SFR1-202ENST00000369729 ABCC11Q96J66 1382 aa12.3□□□□□ -0.44
SFR1-202ENST00000369729 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
SFR1-202ENST00000369729 LMTK3Q96Q04 1460 aa12.3□□□□□ -0.44
SFR1-202ENST00000369729 SIRT1Q96EB6 747 aa12.3□□□□□ -0.44
SFR1-202ENST00000369729 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
SFR1-202ENST00000369729 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
SFR1-202ENST00000369729 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
SFR1-202ENST00000369729 IQGAP1P46940 1657 aa12.29□□□□□ -0.44
SFR1-202ENST00000369729 HIRIP3Q9BW71 556 aaPredicted RBP12.28□□□□□ -0.44
SFR1-202ENST00000369729 NRXN3Q9Y4C0 1643 aa12.28□□□□□ -0.44
SFR1-202ENST00000369729 HSPA2P54652 639 aa12.27□□□□□ -0.44
SFR1-202ENST00000369729 METP08581 1390 aa12.27□□□□□ -0.44
SFR1-202ENST00000369729 DLC1Q96QB1 1528 aa12.27□□□□□ -0.45
SFR1-202ENST00000369729 EVX2Q03828 476 aa12.27□□□□□ -0.45
SFR1-202ENST00000369729 AMOTL2Q9Y2J4 779 aa12.27□□□□□ -0.45
SFR1-202ENST00000369729 SBNO2Q9Y2G9 1366 aa12.26□□□□□ -0.45
SFR1-202ENST00000369729 FAM135BQ49AJ0 1406 aa12.26□□□□□ -0.45
SFR1-202ENST00000369729 PRAM1Q96QH2 718 aa12.26□□□□□ -0.45
SFR1-202ENST00000369729 TECPR2O15040 1411 aa12.25□□□□□ -0.45
SFR1-202ENST00000369729 ASXL1Q8IXJ9 1541 aa12.25□□□□□ -0.45
SFR1-202ENST00000369729 EVC2Q86UK5 1308 aa12.24□□□□□ -0.45
SFR1-202ENST00000369729 SETD1AO15047 1707 aaKnown RBP12.24□□□□□ -0.45
SFR1-202ENST00000369729 TESK2Q96S53 571 aa12.24□□□□□ -0.45
SFR1-202ENST00000369729 KCNA6P17658 529 aa12.23□□□□□ -0.45
SFR1-202ENST00000369729 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
SFR1-202ENST00000369729 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
SFR1-202ENST00000369729 PTCH1Q13635 1447 aa12.23□□□□□ -0.45
SFR1-202ENST00000369729 KNDC1Q76NI1 1749 aa12.22□□□□□ -0.45
SFR1-202ENST00000369729 CPS1P31327 1500 aa12.22□□□□□ -0.45
SFR1-202ENST00000369729 CCDC7Q96M83 1385 aa12.22□□□□□ -0.45
SFR1-202ENST00000369729 ARHGEF28Q8N1W1 1705 aaKnown RBP12.21□□□□□ -0.45
SFR1-202ENST00000369729 SAFB2Q14151 953 aaKnown RBP eCLIP12.21□□□□□ -0.46
SFR1-202ENST00000369729 KIF7Q2M1P5 1343 aa12.2□□□□□ -0.46
SFR1-202ENST00000369729 ATXN8OSP0DMR3 200 aa12.2□□□□□ -0.46
SFR1-202ENST00000369729 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
SFR1-202ENST00000369729 WASHC2AQ641Q2 1341 aa12.2□□□□□ -0.46
SFR1-202ENST00000369729 QRICH2Q9H0J4 1663 aa12.19□□□□□ -0.46
SFR1-202ENST00000369729 PTPRUQ92729 1446 aa12.19□□□□□ -0.46
SFR1-202ENST00000369729 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
SFR1-202ENST00000369729 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
SFR1-202ENST00000369729 ROBO2Q9HCK4 1378 aa12.19□□□□□ -0.46
SFR1-202ENST00000369729 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
SFR1-202ENST00000369729 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
SFR1-202ENST00000369729 NKTRP30414 1462 aaKnown RBP12.18□□□□□ -0.46
SFR1-202ENST00000369729 DDX10Q13206 875 aaKnown RBP12.17□□□□□ -0.46
SFR1-202ENST00000369729 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
SFR1-202ENST00000369729 CHD2O14647 1828 aaKnown RBP12.17□□□□□ -0.46
SFR1-202ENST00000369729 ATAD2Q6PL18 1390 aa12.17□□□□□ -0.46
SFR1-202ENST00000369729 DISP3Q9P2K9 1392 aa12.17□□□□□ -0.46
SFR1-202ENST00000369729 XRN1Q8IZH2 1706 aaKnown RBP12.17□□□□□ -0.46
SFR1-202ENST00000369729 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
SFR1-202ENST00000369729 NINLQ9Y2I6 1382 aa12.16□□□□□ -0.46
SFR1-202ENST00000369729 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
SFR1-202ENST00000369729 CDK19Q9BWU1 502 aa12.16□□□□□ -0.46
SFR1-202ENST00000369729 NCOA3Q9Y6Q9 1424 aa12.16□□□□□ -0.46
SFR1-202ENST00000369729 NWD1Q149M9 1564 aa12.16□□□□□ -0.46
SFR1-202ENST00000369729 STRCQ7RTU9 1775 aa12.16□□□□□ -0.46
SFR1-202ENST00000369729 PLEKHH1Q9ULM0 1364 aa12.15□□□□□ -0.46
SFR1-202ENST00000369729 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
SFR1-202ENST00000369729 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
SFR1-202ENST00000369729 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
SFR1-202ENST00000369729 TMC1Q8TDI8 760 aa12.13□□□□□ -0.47
SFR1-202ENST00000369729 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
SFR1-202ENST00000369729 TERF2IPQ9NYB0 399 aa12.12□□□□□ -0.47
SFR1-202ENST00000369729 ADGRB2O60241 1585 aa12.12□□□□□ -0.47
SFR1-202ENST00000369729 C19orf44Q9H6X5 657 aa12.11□□□□□ -0.47
SFR1-202ENST00000369729 TULP4Q9NRJ4 1543 aa12.11□□□□□ -0.47
SFR1-202ENST00000369729 MKRN4PQ13434 485 aaPredicted RBP12.11□□□□□ -0.47
SFR1-202ENST00000369729 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
SFR1-202ENST00000369729 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
SFR1-202ENST00000369729 ADGRL3Q9HAR2 1447 aa12.1□□□□□ -0.47
SFR1-202ENST00000369729 ANP32CO43423 234 aa12.1□□□□□ -0.47
SFR1-202ENST00000369729 ATF3P18847 181 aa12.1□□□□□ -0.47
SFR1-202ENST00000369729 NUDT16Q96DE0 195 aaKnown RBP12.1□□□□□ -0.47
SFR1-202ENST00000369729 KNSTRNQ9Y448 316 aa12.1□□□□□ -0.47
SFR1-202ENST00000369729 MSH6P52701 1360 aa12.09□□□□□ -0.47
SFR1-202ENST00000369729 PANK3Q9H999 370 aa12.09□□□□□ -0.47
SFR1-202ENST00000369729 ANKARQ7Z5J8 1434 aa12.09□□□□□ -0.47
SFR1-202ENST00000369729 TMEM94Q12767 1356 aa12.09□□□□□ -0.47
SFR1-202ENST00000369729 ZNF335Q9H4Z2 1342 aaPredicted RBP12.08□□□□□ -0.48
SFR1-202ENST00000369729 CADPS2Q86UW7 1296 aa12.08□□□□□ -0.48
SFR1-202ENST00000369729 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.08□□□□□ -0.48
SFR1-202ENST00000369729 CDC42BPGQ6DT37 1551 aa12.07□□□□□ -0.48
SFR1-202ENST00000369729 DCCP43146 1447 aa12.07□□□□□ -0.48
SFR1-202ENST00000369729 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
SFR1-202ENST00000369729 ANKRD36BQ8N2N9 1353 aa12.07□□□□□ -0.48
SFR1-202ENST00000369729 SLC12A5Q9H2X9 1139 aa12.06□□□□□ -0.48
SFR1-202ENST00000369729 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
SFR1-202ENST00000369729 PRKAR2AP13861 404 aaKnown RBP12.06□□□□□ -0.48
SFR1-202ENST00000369729 PPIP5K1Q6PFW1 1433 aa12.05□□□□□ -0.48
SFR1-202ENST00000369729 KTN1Q86UP2 1357 aaKnown RBP12.05□□□□□ -0.48
SFR1-202ENST00000369729 ATP7BP35670 1465 aa12.05□□□□□ -0.48
SFR1-202ENST00000369729 PLEKHG3A1L390 1219 aa12.04□□□□□ -0.48
SFR1-202ENST00000369729 NGDNQ8NEJ9 315 aaKnown RBP12.04□□□□□ -0.48
SFR1-202ENST00000369729 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms