RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 RLBP1P12271 317 aa12.7□□□□□ -0.38
HIPK1-206ENST00000369559 HSCBQ8IWL3 235 aa12.7□□□□□ -0.38
HIPK1-206ENST00000369559 MFAP1P55081 439 aaKnown RBP12.69□□□□□ -0.38
HIPK1-206ENST00000369559 SAMD9LQ8IVG5 1584 aa12.69□□□□□ -0.38
HIPK1-206ENST00000369559 MADDQ8WXG6 1647 aa12.69□□□□□ -0.38
HIPK1-206ENST00000369559 PDCL3Q9H2J4 239 aa12.69□□□□□ -0.38
HIPK1-206ENST00000369559 RSPH4AQ5TD94 716 aa12.69□□□□□ -0.38
HIPK1-206ENST00000369559 NCOA3Q9Y6Q9 1424 aa12.68□□□□□ -0.38
HIPK1-206ENST00000369559 TNNQ9UQP3 1299 aa12.68□□□□□ -0.38
HIPK1-206ENST00000369559 SCAF11Q99590 1463 aaKnown RBP12.68□□□□□ -0.38
HIPK1-206ENST00000369559 ASXL2Q76L83 1435 aa12.68□□□□□ -0.38
HIPK1-206ENST00000369559 DDIT3P35638 169 aa12.67□□□□□ -0.38
HIPK1-206ENST00000369559 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
HIPK1-206ENST00000369559 GAS2L3Q86XJ1 694 aa12.66□□□□□ -0.38
HIPK1-206ENST00000369559 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
HIPK1-206ENST00000369559 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
HIPK1-206ENST00000369559 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
HIPK1-206ENST00000369559 SKOR2Q2VWA4 1001 aaPredicted RBP12.65□□□□□ -0.38
HIPK1-206ENST00000369559 TNPO1Q92973 898 aaKnown RBP12.65□□□□□ -0.38
HIPK1-206ENST00000369559 POLR3AO14802 1390 aaPredicted RBP12.65□□□□□ -0.38
HIPK1-206ENST00000369559 PREX2Q70Z35 1606 aa12.65□□□□□ -0.38
HIPK1-206ENST00000369559 KIAA1211Q6ZU35 1233 aa12.65□□□□□ -0.39
HIPK1-206ENST00000369559 GBP4Q96PP9 640 aa12.65□□□□□ -0.39
HIPK1-206ENST00000369559 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
HIPK1-206ENST00000369559 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
HIPK1-206ENST00000369559 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
HIPK1-206ENST00000369559 CEP152O94986 1710 aa12.64□□□□□ -0.39
HIPK1-206ENST00000369559 PTMSP20962 102 aa12.63□□□□□ -0.39
HIPK1-206ENST00000369559 CCDC173Q0VFZ6 552 aa12.63□□□□□ -0.39
HIPK1-206ENST00000369559 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
HIPK1-206ENST00000369559 SNX21Q969T3 373 aa12.63□□□□□ -0.39
HIPK1-206ENST00000369559 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
HIPK1-206ENST00000369559 SYCP2Q9BX26 1530 aa12.62□□□□□ -0.39
HIPK1-206ENST00000369559 SPHKAPQ2M3C7 1700 aa12.62□□□□□ -0.39
HIPK1-206ENST00000369559 TTC37Q6PGP7 1564 aa12.62□□□□□ -0.39
HIPK1-206ENST00000369559 DUOX2Q9NRD8 1548 aa12.62□□□□□ -0.39
HIPK1-206ENST00000369559 WDR63Q8IWG1 891 aa12.62□□□□□ -0.39
HIPK1-206ENST00000369559 RAB3GAP1Q15042 981 aa12.62□□□□□ -0.39
HIPK1-206ENST00000369559 RUNDC1Q96C34 613 aa12.62□□□□□ -0.39
HIPK1-206ENST00000369559 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
HIPK1-206ENST00000369559 SHPRHQ149N8 1683 aa12.62□□□□□ -0.39
HIPK1-206ENST00000369559 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
HIPK1-206ENST00000369559 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
HIPK1-206ENST00000369559 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
HIPK1-206ENST00000369559 RRP7AQ9Y3A4 280 aaKnown RBP12.61□□□□□ -0.39
HIPK1-206ENST00000369559 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
HIPK1-206ENST00000369559 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
HIPK1-206ENST00000369559 OFD1O75665 1012 aa12.6□□□□□ -0.39
HIPK1-206ENST00000369559 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
HIPK1-206ENST00000369559 TCP11L2Q8N4U5 519 aa12.6□□□□□ -0.39
HIPK1-206ENST00000369559 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
HIPK1-206ENST00000369559 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
HIPK1-206ENST00000369559 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
HIPK1-206ENST00000369559 HDAC1Q13547 482 aaPredicted RBP12.59□□□□□ -0.39
HIPK1-206ENST00000369559 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
HIPK1-206ENST00000369559 KANK1Q14678 1352 aa12.59□□□□□ -0.39
HIPK1-206ENST00000369559 NASPP49321 788 aaPredicted RBP12.59□□□□□ -0.39
HIPK1-206ENST00000369559 TERF1P54274 439 aa12.59□□□□□ -0.39
HIPK1-206ENST00000369559 DZIP1LQ8IYY4 767 aaKnown RBP12.59□□□□□ -0.39
HIPK1-206ENST00000369559 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
HIPK1-206ENST00000369559 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.59□□□□□ -0.39
HIPK1-206ENST00000369559 ANP32BQ92688 251 aaKnown RBP12.59□□□□□ -0.39
HIPK1-206ENST00000369559 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
HIPK1-206ENST00000369559 MSNP26038 577 aaKnown RBP12.58□□□□□ -0.4
HIPK1-206ENST00000369559 ERVK-7P63135 1459 aa12.58□□□□□ -0.4
HIPK1-206ENST00000369559 SLC24A1O60721 1099 aa12.58□□□□□ -0.4
HIPK1-206ENST00000369559 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
HIPK1-206ENST00000369559 IBTKQ9P2D0 1353 aaPredicted RBP12.57□□□□□ -0.4
HIPK1-206ENST00000369559 KIAA1210Q9ULL0 1709 aa12.56□□□□□ -0.4
HIPK1-206ENST00000369559 RIPK4P57078 832 aa12.56□□□□□ -0.4
HIPK1-206ENST00000369559 MAP7D2Q96T17 732 aa12.55□□□□□ -0.4
HIPK1-206ENST00000369559 ARHGAP5Q13017 1502 aa12.55□□□□□ -0.4
HIPK1-206ENST00000369559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.55□□□□□ -0.45e-9■■■■□ 20.4
HIPK1-206ENST00000369559 TRPM2O94759 1503 aa12.55□□□□□ -0.4
HIPK1-206ENST00000369559 GOLGA6L22H0YM25 854 aa12.55□□□□□ -0.4
HIPK1-206ENST00000369559 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
HIPK1-206ENST00000369559 RBM10P98175 930 aaKnown RBP12.54□□□□□ -0.4
HIPK1-206ENST00000369559 KLHL40Q2TBA0 621 aa12.54□□□□□ -0.4
HIPK1-206ENST00000369559 CT47B1P0C2W7 299 aaPredicted RBP12.53□□□□□ -0.4
HIPK1-206ENST00000369559 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
HIPK1-206ENST00000369559 CLEC17AQ6ZS10 378 aa12.53□□□□□ -0.4
HIPK1-206ENST00000369559 PRDM4Q9UKN5 801 aa12.53□□□□□ -0.4
HIPK1-206ENST00000369559 TRIM27P14373 513 aa12.53□□□□□ -0.4
HIPK1-206ENST00000369559 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
HIPK1-206ENST00000369559 HS1BP3Q53T59 392 aa12.53□□□□□ -0.4
HIPK1-206ENST00000369559 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
HIPK1-206ENST00000369559 KIF2CQ99661 725 aa12.53□□□□□ -0.4
HIPK1-206ENST00000369559 DDX49Q9Y6V7 483 aaKnown RBP12.53□□□□□ -0.4
HIPK1-206ENST00000369559 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.4
HIPK1-206ENST00000369559 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.4
HIPK1-206ENST00000369559 CD109Q6YHK3 1445 aa12.52□□□□□ -0.41
HIPK1-206ENST00000369559 SMC4Q9NTJ3 1288 aa12.52□□□□□ -0.41
HIPK1-206ENST00000369559 CLTCL1P53675 1640 aa12.52□□□□□ -0.41
HIPK1-206ENST00000369559 SSFA2P28290 1259 aa12.52□□□□□ -0.41
HIPK1-206ENST00000369559 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
HIPK1-206ENST00000369559 TNNT2P45379 298 aaPredicted RBP12.51□□□□□ -0.41
HIPK1-206ENST00000369559 NUCB1Q02818 461 aa12.51□□□□□ -0.41
HIPK1-206ENST00000369559 FAM13BQ9NYF5 915 aa12.51□□□□□ -0.41
HIPK1-206ENST00000369559 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
HIPK1-206ENST00000369559 NSD3Q9BZ95 1437 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms