RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
PRUNE1-203ENST00000368935 USP35Q9P2H5 1018 aa12.92□□□□□ -0.34
PRUNE1-203ENST00000368935 GLI2P10070 1586 aa12.91□□□□□ -0.34
PRUNE1-203ENST00000368935 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
PRUNE1-203ENST00000368935 TRAK1Q9UPV9 953 aa12.91□□□□□ -0.34
PRUNE1-203ENST00000368935 ABCC3O15438 1527 aa12.91□□□□□ -0.34
PRUNE1-203ENST00000368935 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
PRUNE1-203ENST00000368935 SIGLEC1Q9BZZ2 1709 aa12.9□□□□□ -0.34
PRUNE1-203ENST00000368935 MORC1Q86VD1 984 aa12.9□□□□□ -0.34
PRUNE1-203ENST00000368935 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
PRUNE1-203ENST00000368935 C14orf93Q9H972 538 aaKnown RBP12.9□□□□□ -0.34
PRUNE1-203ENST00000368935 RGS3P49796 1198 aa12.89□□□□□ -0.35
PRUNE1-203ENST00000368935 PIK3C2BO00750 1634 aa12.89□□□□□ -0.35
PRUNE1-203ENST00000368935 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
PRUNE1-203ENST00000368935 PDE3AQ14432 1141 aa12.88□□□□□ -0.35
PRUNE1-203ENST00000368935 SLC12A5Q9H2X9 1139 aa12.88□□□□□ -0.35
PRUNE1-203ENST00000368935 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
PRUNE1-203ENST00000368935 CD109Q6YHK3 1445 aa12.87□□□□□ -0.35
PRUNE1-203ENST00000368935 TULP4Q9NRJ4 1543 aa12.87□□□□□ -0.35
PRUNE1-203ENST00000368935 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
PRUNE1-203ENST00000368935 RPGRIP1LQ68CZ1 1315 aa12.87□□□□□ -0.35
PRUNE1-203ENST00000368935 TMEM132EQ6IEE7 984 aa12.86□□□□□ -0.35
PRUNE1-203ENST00000368935 GGT6Q6P531 493 aa12.86□□□□□ -0.35
PRUNE1-203ENST00000368935 RUNDC1Q96C34 613 aa12.86□□□□□ -0.35
PRUNE1-203ENST00000368935 NEXMIFQ5QGS0 1516 aa12.86□□□□□ -0.35
PRUNE1-203ENST00000368935 CLUAP1Q96AJ1 413 aa12.85□□□□□ -0.35
PRUNE1-203ENST00000368935 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
PRUNE1-203ENST00000368935 RRP7AQ9Y3A4 280 aaKnown RBP12.85□□□□□ -0.35
PRUNE1-203ENST00000368935 IGHDP01880 384 aa12.84□□□□□ -0.35
PRUNE1-203ENST00000368935 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
PRUNE1-203ENST00000368935 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
PRUNE1-203ENST00000368935 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
PRUNE1-203ENST00000368935 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
PRUNE1-203ENST00000368935 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
PRUNE1-203ENST00000368935 NSD2O96028 1365 aa12.84□□□□□ -0.35
PRUNE1-203ENST00000368935 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
PRUNE1-203ENST00000368935 ANKRD36BQ8N2N9 1353 aa12.83□□□□□ -0.36
PRUNE1-203ENST00000368935 CFAP53Q96M91 514 aa12.83□□□□□ -0.36
PRUNE1-203ENST00000368935 DIP2CQ9Y2E4 1556 aa12.83□□□□□ -0.36
PRUNE1-203ENST00000368935 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRUNE1-203ENST00000368935 MTHFSP49914 203 aa12.82□□□□□ -0.36
PRUNE1-203ENST00000368935 EVC2Q86UK5 1308 aa12.82□□□□□ -0.36
PRUNE1-203ENST00000368935 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
PRUNE1-203ENST00000368935 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
PRUNE1-203ENST00000368935 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
PRUNE1-203ENST00000368935 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
PRUNE1-203ENST00000368935 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
PRUNE1-203ENST00000368935 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
PRUNE1-203ENST00000368935 CCDC27Q2M243 656 aa12.81□□□□□ -0.36
PRUNE1-203ENST00000368935 NFKBIBQ15653 356 aa12.8□□□□□ -0.36
PRUNE1-203ENST00000368935 ANKRD26Q9UPS8 1709 aa12.8□□□□□ -0.36
PRUNE1-203ENST00000368935 NUTM2DQ5VT03 806 aaPredicted RBP12.8□□□□□ -0.36
PRUNE1-203ENST00000368935 NEO1Q92859 1461 aa12.79□□□□□ -0.36
PRUNE1-203ENST00000368935 VGFO15240 615 aaPredicted RBP12.79□□□□□ -0.36
PRUNE1-203ENST00000368935 AAMPQ13685 434 aa12.78□□□□□ -0.36
PRUNE1-203ENST00000368935 RICTORQ6R327 1708 aa12.78□□□□□ -0.36
PRUNE1-203ENST00000368935 ARHGAP31Q2M1Z3 1444 aa12.78□□□□□ -0.36
PRUNE1-203ENST00000368935 A0A1W2PP64 1363 aa12.77□□□□□ -0.36
PRUNE1-203ENST00000368935 ABCC11Q96J66 1382 aa12.77□□□□□ -0.36
PRUNE1-203ENST00000368935 RLBP1P12271 317 aa12.77□□□□□ -0.36
PRUNE1-203ENST00000368935 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.36
PRUNE1-203ENST00000368935 BCL2L13Q9BXK5 485 aa12.77□□□□□ -0.36
PRUNE1-203ENST00000368935 MYH16Q9H6N6 1097 aa12.77□□□□□ -0.36
PRUNE1-203ENST00000368935 CABP2Q9NPB3 220 aa12.77□□□□□ -0.36
PRUNE1-203ENST00000368935 NLRP1Q9C000 1473 aa12.77□□□□□ -0.37
PRUNE1-203ENST00000368935 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.37
PRUNE1-203ENST00000368935 PREX1Q8TCU6 1659 aa12.77□□□□□ -0.37
PRUNE1-203ENST00000368935 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
PRUNE1-203ENST00000368935 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
PRUNE1-203ENST00000368935 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
PRUNE1-203ENST00000368935 TNNQ9UQP3 1299 aa12.77□□□□□ -0.37
PRUNE1-203ENST00000368935 USP19O94966 1318 aa12.77□□□□□ -0.37
PRUNE1-203ENST00000368935 ZFYVE9O95405 1425 aa12.76□□□□□ -0.37
PRUNE1-203ENST00000368935 COL3A1P02461 1466 aaPredicted RBP12.75□□□□□ -0.37
PRUNE1-203ENST00000368935 ZMYM3Q14202 1370 aa12.75□□□□□ -0.37
PRUNE1-203ENST00000368935 RAPGEF3O95398 923 aa12.75□□□□□ -0.37
PRUNE1-203ENST00000368935 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
PRUNE1-203ENST00000368935 TMEM131LA2VDJ0 1609 aa12.75□□□□□ -0.37
PRUNE1-203ENST00000368935 PTPRMP28827 1452 aa12.74□□□□□ -0.37
PRUNE1-203ENST00000368935 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRUNE1-203ENST00000368935 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
PRUNE1-203ENST00000368935 GSE1Q14687 1217 aa12.73□□□□□ -0.37
PRUNE1-203ENST00000368935 KIF20BQ96Q89 1820 aa12.73□□□□□ -0.37
PRUNE1-203ENST00000368935 SEC24BO95487 1268 aa12.73□□□□□ -0.37
PRUNE1-203ENST00000368935 IDI1Q13907 227 aa12.73□□□□□ -0.37
PRUNE1-203ENST00000368935 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
PRUNE1-203ENST00000368935 ATAD2Q6PL18 1390 aa12.72□□□□□ -0.37
PRUNE1-203ENST00000368935 MED14O60244 1454 aa12.72□□□□□ -0.37
PRUNE1-203ENST00000368935 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
PRUNE1-203ENST00000368935 MVPQ14764 893 aaKnown RBP12.72□□□□□ -0.37
PRUNE1-203ENST00000368935 STK26Q9P289 416 aa12.72□□□□□ -0.37
PRUNE1-203ENST00000368935 CD163L1Q9NR16 1453 aa12.71□□□□□ -0.37
PRUNE1-203ENST00000368935 ZKSCAN2Q63HK3 967 aa12.71□□□□□ -0.37
PRUNE1-203ENST00000368935 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.37
PRUNE1-203ENST00000368935 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.37
PRUNE1-203ENST00000368935 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.37
PRUNE1-203ENST00000368935 SLC52A1Q9NWF4 448 aa12.71□□□□□ -0.37
PRUNE1-203ENST00000368935 PDZRN3Q9UPQ7 1066 aa12.71□□□□□ -0.37
PRUNE1-203ENST00000368935 YEATS2Q9ULM3 1422 aa12.71□□□□□ -0.38
PRUNE1-203ENST00000368935 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms